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Platform GPL1449 Query DataSets for GPL1449
Status Public on Jul 22, 2005
Title GE Codelink Human Uniset I, II, and 20K
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Description GE/Amersham Codelink Human Uniset I, II, and 20K oligonucleotide arrays
Contributor(s) Krainc D
Submission date Sep 15, 2004
Last update date Apr 09, 2008
Contact name Dimitri Krainc
Phone 617-724-1726
Fax 617-724-1480
Organization name MassGeneral Institute for Neurodegeneration
Department Neurology
Lab Krainc Lab
Street address Building 114, 16th St.
City Charlestown
State/province MA
ZIP/Postal code 02129
Country USA
Samples (92) GSM30681, GSM30682, GSM30683, GSM30684, GSM30685, GSM30686 
Series (2)
GSE1767 Human blood expression for Huntington's disease versus control, Codelink
GSE3239 A Compendium of Microarrays for Normal Human Cell Cultures

Data table header descriptions
GB_ACC GenBank accession number;
OGS Official Gene Symbol
UNIGENE UniGene cluster ID;
Molecular Function (GO ID) molecular function gene ontology ID
Biological Process (GO ID) biological process gene ontology ID
Cellular Component (GO ID) cellular component gene ontology ID
Cytogenetic chromosomal location

Data table
ID GB_ACC OGS GENE UNIGENE Molecular Function (GO ID) Biological Process (GO ID) Cellular Component (GO ID) Cytogenetic SPOT_ID
000106CB1_PROBE1 NM_002489 NDUFA4 4697 50098 NADH dehydrogenase (ubiquinone) (GO:0008137) NULL NADH dehydrogenase (ubiquinone) (GO:0005748) 7p22.1
000136CB1_PROBE1 NM_016071 MRPS33 51650 83006 NULL NULL NULL 7q32-q34
000278CB1_PROBE1 NM_004462 FDFT1 2222 48876 NULL steroid biosynthesis (GO:0006694) integral membrane protein (GO:0016021) 8p23.1-p22
000398CB1_PROBE1 NM_001015 RPS11 6205 182740 RNA binding (GO:0003723), structural protein of ribosome (GO:0003735) protein biosynthesis (GO:0006412) ribosome (GO:0005840) 19q13.3
000421CB1_PROBE1 NM_001697 ATP5O 539 76572 hydrogen-transporting two-sector ATPase (GO:0003936), transporter (GO:0005215) NULL membrane fraction (GO:0005624), hydrogen-transporting ATP synthase (GO:0005753) 21q22.11
000422CB1_PROBE1 NM_018686 CMAS 55907 12492 NULL NULL NULL 12p13.2
000666CB1_PROBE1 NM_004966 HNRPF 3185 808 RNA binding (GO:0003723), heterogeneous nuclear ribonucleoprotein (GO:0008436) RNA processing (GO:0006396) nucleus (GO:0005634) 10q11.21-q11.22
000730CB1_PROBE1 NM_000995 RPL34 6164 250895 RNA binding (GO:0003723), structural protein of ribosome (GO:0003735) protein biosynthesis (GO:0006412) cytosolic large ribosomal (60S)-subunit (GO:0005842) 4q24
000735CB1_PROBE1 NM_001689 ATP5G3 518 429 hydrogen-transporting two-sector ATPase (GO:0003936), transporter (GO:0005215) energy pathways (GO:0006091) membrane fraction (GO:0005624), hydrogen-transporting ATP synthase (GO:0005753) 2q31.1
001089CB1_PROBE1 NM_001019 RPS15A 6210 343665 RNA binding (GO:0003723), structural protein of ribosome (GO:0003735) protein biosynthesis (GO:0006412) cytosolic small ribosomal (40S)-subunit (GO:0005843) 16p
001213CB1_PROBE1 NM_032498 LOC84528 84528 28937 NULL NULL NULL Xq24
001372CB1_PROBE1 NM_001016 RPS12 6206 339696 RNA binding (GO:0003723), structural protein of ribosome (GO:0003735) protein biosynthesis (GO:0006412) cytosolic small ribosomal (40S)-subunit (GO:0005843) 6q23.2
001762CB1_PROBE1 NM_080678 NCE2 140739 289051 NULL NULL NULL 2q37.3
001799CB1_PROBE1 NM_024713 FLJ22557 79768 106101 NULL NULL NULL 15q13.1
002150CB1_PROBE1 NM_006713 PC4 10923 349506 single-stranded DNA binding (GO:0003697), transcription co-activator (GO:0003713) transcription regulation from Pol II promoter (GO:0006357) transcription factor complex (GO:0005667) 5p13.3
002717CB1_PROBE1 NM_006947 SRP72 6731 237825 NULL NULL NULL 4q11
007747CB1_PROBE1 NM_006327 TIMM23 10431 11866 NULL mitochondrial translocation (GO:0006628) mitochondrial inner membrane translocase complex (GO:0005744), integral plasma membrane protein (GO:0005887), integral membrane protein (GO:0016021) 10q11.21-q11.23
007755CB1_PROBE1 NM_004701 CCNB2 9133 194698 NULL NULL NULL 15q21.2
008076CB1_PROBE1 NM_004335 BST2 684 118110 NULL humoral defense mechanism (GO:0006959), cell-cell signalling (GO:0007267), developmental processes (GO:0007275), cell proliferation (GO:0008283) integral plasma membrane protein (GO:0005887) 19p13.2

Total number of rows: 19881

Table truncated, full table size 2225 Kbytes.

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Supplementary data files not provided

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