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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Sep 23, 2004 |
| Title |
RNG-MRC_HU25k_NICE |
| Technology type |
spotted oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Support |
glass |
| |
|
| Description |
RNG-MRC_HU25k_NICE
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| |
|
| Web link |
http://www.microarray.fr:8080/mediante/
|
| Contributor(s) |
Le Brigand K, Barbry P |
| Submission date |
Sep 17, 2004 |
| Last update date |
Jan 18, 2013 |
| Contact name |
Kevin Lebrigand |
| Organization name |
IPMC/CNRS
|
| Lab |
Functional Genomics Platform of Nice-Sophia-Antipolis, France.
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| Street address |
660 route des lucioles
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| City |
Valbonne - Sophia-Antipolis |
| ZIP/Postal code |
06560 |
| Country |
France |
| |
|
| Samples (315)
|
GSM137284, GSM137285, GSM137286, GSM137287, GSM190651, GSM190652
GSM190653, GSM190654, GSM190657, GSM190658, GSM190659, GSM190660, GSM190661, GSM190662, GSM190663, GSM190664, GSM190665, GSM190666, GSM190667, GSM190668, GSM190669, GSM190670, GSM190671, GSM190672, GSM190673, GSM190674, GSM190675, GSM190676, GSM190677, GSM190678, GSM190679, GSM190680, GSM190681, GSM190682, GSM190683, GSM190684, GSM190685, GSM190686, GSM190687, GSM190688, GSM190689, GSM190690, GSM190691, GSM190692, GSM190693, GSM190694, GSM190695, GSM190696, GSM190697, GSM190698, GSM190699, GSM190700, GSM190701, GSM190702, GSM190703, GSM190704, GSM190705, GSM190706, GSM190707, GSM190708, GSM190709, GSM190710, GSM190711, GSM190712, GSM190713, GSM190714, GSM262476, GSM262477, GSM262478, GSM262479, GSM262480, GSM262481, GSM276789, GSM276790, GSM276791, GSM276792, GSM276793, GSM276794, GSM308492, GSM308493, GSM308494, GSM308495, GSM308496, GSM308497, GSM320886, GSM320887, GSM320888, GSM320889, GSM320890, GSM320891, GSM323177, GSM323178, GSM323179, GSM323180, GSM323181, GSM323182, GSM323183, GSM323184, GSM323185, GSM323186, GSM323187, GSM323188, GSM323189, GSM323190, GSM323383, GSM323384, GSM323385, GSM323386, GSM323387, GSM323388, GSM323389, GSM323390, GSM324778, GSM324779, GSM324780, GSM324781, GSM324782, GSM324783, GSM324784, GSM324785, GSM352912, GSM352913, GSM352914, GSM352915, GSM361581, GSM361582, GSM361583, GSM361584, GSM361585, GSM361586, GSM361587, GSM361588, GSM400160, GSM400161, GSM400162, GSM400163, GSM400164, GSM400165, GSM400166, GSM400167, GSM400168, GSM400169, GSM400170, GSM400171, GSM464319, GSM464320, GSM464321, GSM464322, GSM464323, GSM464324, GSM464325, GSM464326, GSM464327, GSM464328, GSM464329, GSM464330, GSM464331, GSM464332, GSM464333, GSM464334, GSM464335, GSM464336, GSM464337, GSM464338, GSM464339, GSM464340, GSM464341, GSM464342, GSM464343, GSM464344, GSM464345, GSM464346, GSM464347, GSM464348, GSM464349, GSM464350, GSM464351, GSM464352, GSM464353, GSM464354, GSM464355, GSM464356, GSM464357, GSM464358, GSM464359, GSM464360, GSM497641, GSM497642, GSM497643, GSM497644, GSM498145, GSM498146, GSM498147, GSM498148, GSM498149, GSM498150, GSM498151, GSM498152, GSM498153, GSM498154, GSM528435, GSM528436, GSM528437, GSM528438, GSM528439, GSM528440, GSM528441, GSM528442, GSM528443, GSM528444, GSM528445, GSM528446, GSM528447, GSM528448, GSM528449, GSM528450, GSM528451, GSM528452, GSM528453, GSM528454, GSM528455, GSM528456, GSM528457, GSM528458, GSM528459, GSM528460, GSM528461, GSM528462, GSM528463, GSM528464, GSM528465, GSM528466, GSM528467, GSM528468, GSM528469, GSM528470, GSM528471, GSM528472, GSM528473, GSM528474, GSM528475, GSM528476, GSM528477, GSM528478, GSM528479, GSM556649, GSM556650, GSM556651, GSM556652, GSM556653, GSM556654, GSM556655, GSM556656, GSM556657, GSM556658, GSM556659, GSM556660, GSM556661, GSM556662, GSM564823, GSM564824, GSM564825, GSM564826, GSM601425, GSM601426, GSM601427, GSM601428, GSM601429, GSM601430, GSM822639, GSM822640, GSM822641, GSM822642, GSM822643, GSM822644, GSM822645, GSM822646, GSM822647, GSM822648, GSM822649, GSM822650, GSM822651, GSM822652, GSM822653, GSM822654, GSM822740, GSM822741, GSM822742, GSM822743, GSM822744, GSM822745, GSM822746, GSM822747, GSM822748, GSM822749, GSM822750, GSM822751, GSM822752, GSM822753, GSM822754, GSM822755, GSM822756, GSM822757, GSM2212279, GSM2212280, GSM2212281, GSM2212282, GSM2212283, GSM2212284, GSM2212285, GSM2212286, GSM2212287, GSM2212288, GSM2212289, GSM2212290
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| Series (27)
|
| GSE5911 |
Identification of genes regulated by overexpressed SF-1 in human adrenocortical cells |
| GSE7706 |
Gene expression profiling of liver injury during human orthotopic liver transplantation. |
| GSE10382 |
Gene expression profiling of Imatinib and PD166326 resistant cell lines |
| GSE10918 |
Microarrays analysis of SREBP-1a and SREBP-1c target genes identify new regulatory pathways. |
| GSE12279 |
Functional cooperation between AAA-ATPase domain and a bromodomain. |
| GSE12793 |
Analysis of Rosiglitazone therapy on adipose tissue in type 2 diabetic patients |
| GSE12894 |
Effect of rosiglitazone treatment on insulin sensitivity in adipose tissue of type 2 diabetic patients |
| GSE12895 |
Rosiglitazone effect on type 2 diabetic patients: adipose tissue |
| GSE12897 |
Gene expression profiling in peripheral blood cells of patients with rheumatoid arthitis in response of anti-TNF-alpha |
| GSE12947 |
Microarray analysis of BHLHB2 and BHLHB3 target genes in human skeletal muscle cells |
| GSE14070 |
Gene regulation by full length human adiponectin |
| GSE14477 |
mRNA profiling of mir-155-overexpressing fibroblasts |
| GSE15957 |
Hela hsa-miR-34a, b-5p, and c transcriptomes |
| GSE18694 |
MiRNA and lung cancer (INCA project) - 26 RNG25k microarrays |
| GSE18695 |
MiRNA and lung cancer (INCA Project) - 16 RNG25k microarrays |
| GSE18805 |
Role of miR-210 in late stages of lung cancer: mitochondrial alterations associated with a modulation of HIF1 activity |
| GSE19913 |
Syndecan-2 and apoptosis in osteosarcoma |
| GSE19931 |
Overexpression of miR-483-3p in human keratinocytes |
| GSE19933 |
Overexpression of miR-129-5p in thyroid carcinoma cells |
| GSE20083 |
miRNA expression in thyroid cancer cells |
| GSE21125 |
Transcriptional profiling of human white blood cells at the different stages of NYHA classification |
| GSE22372 |
Identification of direct androgen-target genes in the prostate cancer cell line LNCaP |
| GSE22857 |
FTO: gene expression and function in skeletal muscle |
| GSE24401 |
Atorvastatin effect on SaOS2 osteosarcoma cells |
| GSE33235 |
miR-34a, miR-122, miR-206 and miR-210 targets identification |
| GSE33247 |
“Seed-milarity” confers to hsa-miR-210 and hsa-miR-147b similar functional activity |
| GSE83673 |
Effect of Metformin and AICAR treatments in the prostate cancer cell line LNCaP |
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| Data table header descriptions |
| ID |
|
| BLOCK |
Block |
| COLUMN |
Column in block |
| ROW |
Row in block |
| INTERNAL_ID |
Mediante Internal ID |
| GENE_SYMBOL |
Gene symbol |
| GENBANK |
Genbank accession number |
| GB_ACC |
Genbank accession number |
| SPOT_ID |
|
| UNIGENE |
Unigene ID |
| LOCUS_ID |
LocusLink ID |
| SEQUENCE |
Sequence of spotted oligonucleotide |
| Data table |
| ID |
BLOCK |
COLUMN |
ROW |
INTERNAL_ID |
GENE_SYMBOL |
GENBANK |
GB_ACC |
SPOT_ID |
UNIGENE |
LOCUS_ID |
SEQUENCE |
| 1 |
1 |
1 |
1 |
65850 |
FOXN4 |
NM_213596 |
NM_213596 |
|
75535 |
121643 |
GCGACCAGTCCTTCCCAGACTTGCAGGTGACGGGTCTCTACACAGCGTAC |
| 2 |
1 |
2 |
1 |
24633 |
ZNF409 |
NM_014894 |
NM_014894 |
|
225975 |
22830 |
CATGTGCCACAAATCTCTAAATCCCCAGGACTCAGACCTAGGCAGCACCC |
| 3 |
1 |
3 |
1 |
73331 |
FLJ38343 |
NM_175915 |
NM_175915 |
|
194766 |
284895 |
CCACGTTCTCTTATATACTATGGACCTATCAGCTCCACTTCACTCATCCG |
| 4 |
1 |
4 |
1 |
20891 |
NKX2-8 |
NM_014360 |
NM_014360 |
|
234763 |
26257 |
TGTTTATATAAACAGAGATTCCGCTGTAAATGCGCTAATATCCCGGCTGC |
| 5 |
1 |
5 |
1 |
71694 |
DMRTA1 |
NM_022160 |
NM_022160 |
|
371976 |
63951 |
TACTTCAGACCAAATCAGGACAATCCGTAATGTATATGCCCATTCTCTCT |
| 6 |
1 |
6 |
1 |
13102 |
MLLT1 |
NM_005934 |
NM_005934 |
|
234774 |
4298 |
AGCTCAGACTCCAGCTCAGACTCAGACTTCGAGCCATCCCAGAACCACAG |
| 7 |
1 |
7 |
1 |
134423 |
MYOCD |
NM_153604 |
NM_153604 |
|
42128 |
93649 |
CGAACTTTGGGGATATAACGACTGTCACTTTTCCTGTCACACCCAACACG |
| 8 |
1 |
8 |
1 |
16604 |
POU3F3 |
NM_006236 |
NM_006236 |
|
248158 |
5455 |
GAGAAGGAGGTGGTGCGGGTCTGGTTCTGCAATCGGCGCCAAAAGGAGAA |
| 9 |
1 |
9 |
1 |
29846 |
FLJ20130 |
NM_017681 |
NM_017681 |
|
163629 |
54830 |
ATAGGGTGATGTCTGCCAAAAGTACATGCCAACCTATATAGTGCTAGATAC |
| 10 |
1 |
10 |
1 |
112430 |
GAPD |
NM_002046 |
NM_002046 |
|
169476 |
2597 |
ACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTTGAAGA |
| 11 |
1 |
11 |
1 |
76932 |
DKFZp564A043 |
AL050007 |
AL050007 |
|
367697 |
10762 |
AGAAGGAGAGGACTCATCAGGGGTTTAGGAGTTTGCAAAGCCTTCAAAAT |
| 12 |
1 |
12 |
1 |
95549 |
NME2 |
NM_001018136 |
NM_001018136 |
|
|
4831 |
GACACAGCTCTTCATTCCATTGACTTAGAGGCAACAGGATTGATCATTCT |
| 13 |
1 |
13 |
1 |
78061 |
DULLARD |
NM_015343 |
NM_015343 |
|
84359 |
23399 |
ACTGGCCAGAGTGACAGACATACGGTGATCCAGGAGGCTCAAAGAGAAGC |
| 14 |
1 |
14 |
1 |
18649 |
NME7 |
NM_197972 |
NM_197972 |
|
274479 |
29922 |
CGTTGTTTTAACCTGACTGAATACAAGATCAACAAGAGCACTGTACTCCTG |
| 15 |
1 |
15 |
1 |
169882 |
PP3659 |
AF318349 |
AF318349 |
|
444845 |
2064 |
GTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAACCTAGTAC |
| 16 |
1 |
16 |
1 |
10281 |
#NA |
NM_005009 |
NM_005009 |
|
9235 |
4833 |
GGGTACAATGTCGTCCGCGCCTCAAGGGCCATGATTGGACACACCGACTC |
| 17 |
1 |
17 |
1 |
163136 |
RAD51 |
NM_002875 |
NM_002875 |
|
446554 |
5888 |
GAGCTTGACAAACTACTTCAAGGTGGAATTGAGACTGGATCTATCACAGA |
| 18 |
1 |
18 |
1 |
154299 |
XRCC5 |
AK023296 |
AK023296 |
|
257082 |
7520 |
GGCAATACTGAGCACCATAGGCTTGAGTATGCCATTTAACTGTTTGGTTTT |
| 19 |
1 |
19 |
1 |
9392 |
CHAF1A |
NM_005483 |
NM_005483 |
|
79018 |
10036 |
GAATCTGCCCTTTAATAAAGCATTATTGAGATTGCTGGCCTATTGGGGAA |
| 20 |
1 |
20 |
1 |
45523 |
C15ORF20 |
NM_025049 |
NM_025049 |
|
458571 |
80119 |
CATGCCTTTGCAGGTAAGTAGGAACCCCTAGGGCTTGAGCTAAGAGCAAG |
Total number of rows: 27648
Table truncated, full table size 2876 Kbytes.
| Supplementary data files not provided |
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