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Status
Public on Mar 06, 2012
Title
Arraystar Human LncRNA microarray V2.0 (Agilent-033010 Probe Name version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
ArrayStar Human LncRNA Microarray V2.0 is designed for the global profiling of human LncRNAs and protein-coding transcripts. 33,045 LncRNAs and 30,215 coding transcripts can be detected by our second-generation LncRNA microarray. The LncRNAs are carefully collected from the most authoritative databases such as RefSeq, UCSC knowngenes, Ensembl and many related literatures. Each transcript is represented by a specific exon or splice junction probe which can identify individual transcript accurately. Positive probes for housekeeping genes and negative probes are also printed onto the array for hybridization quality control.
Submission date
Mar 06, 2012
Last update date
Apr 23, 2021
Contact name
Panos Pan
E-mail(s)
panosp@arraystar.com Phone
888-416-6343
Organization name
Arraystar Inc.
Street address
9430 Key West Avenue
City
Rockville
State/province
MD
ZIP/Postal code
20850
Country
USA
Samples (449)
GSM887867 , GSM887868 , GSM887869 , GSM887870 , GSM887871 , GSM887872
GSM887873 ,
GSM887874 ,
GSM980326 ,
GSM980327 ,
GSM980328 ,
GSM980329 ,
GSM980330 ,
GSM980331 ,
GSM980332 ,
GSM980333 ,
GSM980334 ,
GSM980335 ,
GSM980336 ,
GSM980337 ,
GSM980338 ,
GSM980339 ,
GSM980340 ,
GSM980341 ,
GSM980342 ,
GSM980343 ,
GSM980344 ,
GSM980345 ,
GSM980346 ,
GSM980347 ,
GSM1064138 ,
GSM1064139 ,
GSM1064140 ,
GSM1064141 ,
GSM1064142 ,
GSM1064143 ,
GSM1064590 ,
GSM1064591 ,
GSM1064592 ,
GSM1133501 ,
GSM1133502 ,
GSM1133503 ,
GSM1133504 ,
GSM1138215 ,
GSM1138216 ,
GSM1149064 ,
GSM1149065 ,
GSM1149066 ,
GSM1149067 ,
GSM1149068 ,
GSM1149069 ,
GSM1229151 ,
GSM1229152 ,
GSM1229153 ,
GSM1229154 ,
GSM1229155 ,
GSM1229156 ,
GSM1229157 ,
GSM1229158 ,
GSM1229159 ,
GSM1229160 ,
GSM1229161 ,
GSM1239670 ,
GSM1239671 ,
GSM1239672 ,
GSM1239673 ,
GSM1239674 ,
GSM1239675 ,
GSM1239676 ,
GSM1239677 ,
GSM1239678 ,
GSM1241316 ,
GSM1241317 ,
GSM1241318 ,
GSM1241319 ,
GSM1241320 ,
GSM1241321 ,
GSM1241322 ,
GSM1241323 ,
GSM1241324 ,
GSM1241325 ,
GSM1241326 ,
GSM1241327 ,
GSM1242514 ,
GSM1242515 ,
GSM1242516 ,
GSM1242517 ,
GSM1242518 ,
GSM1242519 ,
GSM1242520 ,
GSM1242521 ,
GSM1242522 ,
GSM1242523 ,
GSM1272773 ,
GSM1272774 ,
GSM1272775 ,
GSM1272776 ,
GSM1272777 ,
GSM1272778 ,
GSM1272779 ,
GSM1272780 ,
GSM1272781 ,
GSM1272782 ,
GSM1272783 ,
GSM1272784 ,
GSM1272785 ,
GSM1272786 ,
GSM1272787 ,
GSM1282879 ,
GSM1282880 ,
GSM1282881 ,
GSM1282882 ,
GSM1282883 ,
GSM1282884 ,
GSM1282885 ,
GSM1282886 ,
GSM1282887 ,
GSM1282888 ,
GSM1282889 ,
GSM1282890 ,
GSM1296000 ,
GSM1296001 ,
GSM1296002 ,
GSM1296003 ,
GSM1296004 ,
GSM1296005 ,
GSM1296006 ,
GSM1296007 ,
GSM1296008 ,
GSM1296009 ,
GSM1296010 ,
GSM1296011 ,
GSM1296012 ,
GSM1296013 ,
GSM1296014 ,
GSM1296015 ,
GSM1296016 ,
GSM1296017 ,
GSM1296018 ,
GSM1296019 ,
GSM1296020 ,
GSM1296021 ,
GSM1296022 ,
GSM1296023 ,
GSM1308588 ,
GSM1308589 ,
GSM1308590 ,
GSM1308591 ,
GSM1308592 ,
GSM1308593 ,
GSM1324152 ,
GSM1324153 ,
GSM1324154 ,
GSM1324155 ,
GSM1324156 ,
GSM1324157 ,
GSM1324608 ,
GSM1324609 ,
GSM1324610 ,
GSM1324611 ,
GSM1324612 ,
GSM1324613 ,
GSM1324614 ,
GSM1326486 ,
GSM1326487 ,
GSM1326488 ,
GSM1326490 ,
GSM1326491 ,
GSM1326492 ,
GSM1326493 ,
GSM1326495 ,
GSM1326496 ,
GSM1326498 ,
GSM1326499 ,
GSM1326500 ,
GSM1326502 ,
GSM1326503 ,
GSM1326504 ,
GSM1326506 ,
GSM1326507 ,
GSM1326508 ,
GSM1326510 ,
GSM1326511 ,
GSM1326512 ,
GSM1326513 ,
GSM1326515 ,
GSM1326516 ,
GSM1326517 ,
GSM1326518 ,
GSM1326519 ,
GSM1326521 ,
GSM1326522 ,
GSM1326523 ,
GSM1331300 ,
GSM1331301 ,
GSM1331302 ,
GSM1331303 ,
GSM1331304 ,
GSM1331305 ,
GSM1354764 ,
GSM1354765 ,
GSM1354766 ,
GSM1354767 ,
GSM1354768 ,
GSM1354769 ,
GSM1354770 ,
GSM1354771 ,
GSM1354772 ,
GSM1354773 ,
GSM1375473 ,
GSM1375474 ,
GSM1384350 ,
GSM1384351 ,
GSM1384352 ,
GSM1384353 ,
GSM1384354 ,
GSM1384355 ,
GSM1420249 ,
GSM1420250 ,
GSM1420251 ,
GSM1420252 ,
GSM1420253 ,
GSM1420254 ,
GSM1492906 ,
GSM1495562 ,
GSM1495563 ,
GSM1495564 ,
GSM1495565 ,
GSM1495566 ,
GSM1495567 ,
GSM1575882 ,
GSM1575883 ,
GSM1575884 ,
GSM1575885 ,
GSM1575886 ,
GSM1575887 ,
GSM1636048 ,
GSM1636049 ,
GSM1636050 ,
GSM1636051 ,
GSM1636052 ,
GSM1636053 ,
GSM1673950 ,
GSM1673951 ,
GSM1673952 ,
GSM1673953 ,
GSM1673954 ,
GSM1673955 ,
GSM1704228 ,
GSM1704229 ,
GSM1704230 ,
GSM1704231 ,
GSM1704232 ,
GSM1704233 ,
GSM1859837 ,
GSM1859838 ,
GSM1859839 ,
GSM1859840 ,
GSM1859841 ,
GSM1859842 ,
GSM1859843 ,
GSM1859844 ,
GSM1859845 ,
GSM1859846 ,
GSM1859847 ,
GSM1859848 ,
GSM1933821 ,
GSM1933822 ,
GSM1933823 ,
GSM2051188 ,
GSM2051189 ,
GSM2051190 ,
GSM2051191 ,
GSM2051192 ,
GSM2051193 ,
GSM2053976 ,
GSM2053977 ,
GSM2120830 ,
GSM2120831 ,
GSM2123120 ,
GSM2123121 ,
GSM2123122 ,
GSM2123123 ,
GSM2123124 ,
GSM2123125 ,
GSM2123126 ,
GSM2123127 ,
GSM2123128 ,
GSM2123129 ,
GSM2133638 ,
GSM2133639 ,
GSM2133640 ,
GSM2133641 ,
GSM2133642 ,
GSM2133643 ,
GSM2133644 ,
GSM2133645 ,
GSM2133646 ,
GSM2133647 ,
GSM2133648 ,
GSM2133649 ,
GSM2133650 ,
GSM2133651 ,
GSM2133652 ,
GSM2133653 ,
GSM2133654 ,
GSM2133655 ,
GSM2133656 ,
GSM2133657 ,
GSM2133658 ,
GSM2133659 ,
GSM2133660 ,
GSM2133661 ,
GSM2133662 ,
GSM2133663 ,
GSM2140862 ,
GSM2140863 ,
GSM2140864 ,
GSM2140865 ,
GSM2140866 ,
GSM2140867 ,
GSM2140868 ,
GSM2140869 ,
GSM2140870 ,
GSM2140871 ,
GSM2224431 ,
GSM2224432 ,
GSM2453576 ,
GSM2453577 ,
GSM2453578 ,
GSM2453579 ,
GSM2498136 ,
GSM2498137 ,
GSM2498138 ,
GSM2498139 ,
GSM2498140 ,
GSM2498141 ,
GSM2498142 ,
GSM2498143 ,
GSM2520888 ,
GSM2520889 ,
GSM2520890 ,
GSM2520891 ,
GSM2520892 ,
GSM2520893 ,
GSM2520894 ,
GSM2520895 ,
GSM2699117 ,
GSM2699118 ,
GSM2699119 ,
GSM2699120 ,
GSM2699121 ,
GSM2699122 ,
GSM2699123 ,
GSM2699124 ,
GSM2699125 ,
GSM2699126 ,
GSM2759270 ,
GSM2759271 ,
GSM2759272 ,
GSM2759273 ,
GSM2759274 ,
GSM2759275 ,
GSM2774691 ,
GSM2774692 ,
GSM2774693 ,
GSM2774694 ,
GSM2774695 ,
GSM2774696 ,
GSM2893856 ,
GSM2893857 ,
GSM2893858 ,
GSM2893859 ,
GSM2893860 ,
GSM2893861 ,
GSM2893862 ,
GSM2893863 ,
GSM2893864 ,
GSM2893865 ,
GSM2893866 ,
GSM2893867 ,
GSM2893868 ,
GSM2893869 ,
GSM3039433 ,
GSM3039435 ,
GSM3039436 ,
GSM3039437 ,
GSM3039438 ,
GSM3039439 ,
GSM3039440 ,
GSM3039441 ,
GSM3039442 ,
GSM3039444 ,
GSM3039445 ,
GSM3039446 ,
GSM3039447 ,
GSM3309943 ,
GSM3309944 ,
GSM3309945 ,
GSM3309946 ,
GSM3309947 ,
GSM3309948 ,
GSM3309949 ,
GSM3309950 ,
GSM3309951 ,
GSM3309952 ,
GSM4037183 ,
GSM4037184 ,
GSM4037185 ,
GSM4037186 ,
GSM4037187 ,
GSM4037188 ,
GSM4037189 ,
GSM4037190 ,
GSM4037191 ,
GSM4037192 ,
GSM4037193 ,
GSM4037194 ,
GSM4037195 ,
GSM4037196 ,
GSM4037197 ,
GSM4037198 ,
GSM4037199 ,
GSM4037200 ,
GSM4119806 ,
GSM4119807 ,
GSM4119808 ,
GSM4119809 ,
GSM4119810 ,
GSM4119811 ,
GSM4119812 ,
GSM4119813 ,
GSM4119814 ,
GSM4119815 ,
GSM4566732 ,
GSM4566733 ,
GSM4566734 ,
GSM4566735 ,
GSM4566736 ,
GSM4566737 ,
GSM5600154 ,
GSM5600155 ,
GSM5600156 ,
GSM5600157 ,
GSM5600158 ,
GSM5600159 ,
GSM5600160 ,
GSM5600161 ,
GSM5600162 Series (59)
GSE36315 Aberrant expression of lncRNAs in autistic brain
GSE39846 Profiling of lncRNAs and protein-coding RNAs in colorectal cancer and of MYC-regulated lncRNAs and protein-coding RNAs
GSE43493 Noncoding RNA expression profiling of cisplatin-resistant cells derived from the A549 lung cell line (lncRNA and mRNA)
GSE43494 Noncoding RNA expression profiling of cisplatin-resistant cells derived from the A549 lung cell line
GSE43509 long noncoding RNAs expression data from GM0637 with and without DNA damage
GSE46643 Profiling of lncRNA expression in human monocytic cells
GSE46756 mRNA and lncRNA expression profiles in MCF-7 breast cancer cells stably overexpressing pcDNA3.1-PinX1 and Empty Vector
GSE47411 Expression profiling of long noncoding RNAs and mRNAs in human plasma across time points
GSE50783 LncRNAs Expression in Preeclampsia Placenta Reveals the Potential Role of LncRNAs Contributing to Preeclampsia Pathogenesis
GSE51146 The gene expression profiling of human Glioblastoma multiforme and normal brain tissues
GSE51260 Aberrantly expressed lncRNAs in Primary Varicose Great Saphenous Veins
GSE51308 LncRNA/mRNA expression profiling for 10 human samples
GSE52618 Expression profiling of long noncoding RNAs and mRNAs in uterine leiomyoma
GSE53137 lncRNAs expression signatures of gastric cancer
GSE53550 HUVEC with/without VEGF-A treatment in 3D matrigel or 2D monoculture
GSE53551 Knockdown of LIVE1 in HUVEC compared to universal negative control
GSE54135 Molecular signature in human cumulus cells related to embryonic developmental potential
GSE54797 Long non-coding RNAs and mRNAs regulated by TGF-β
GSE54800 lncRNA-Activated by TBGF-β-induced transcriptional changes and binding targets in hepatocellular carcinoma cells
GSE54835 In vitro and In vivo Evidence of Long Non-coding OR3A4 in Gastric Cancer Progression and Tumorigenicity
GSE54913 mRNA expression in blood of 18 schizophrenia patients and 12 healthy controls
GSE54914 Expression in blood of schizophrenia patients and healthy controls
GSE55191 The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis
GSE56081 The long noncoding RNA expression profile of human intervertebral disc degeneration identified by microarray analysis
GSE57111 Analysis of altered LncRNA expression profiles in proximal renal tubular cells in response to calcium oxalate monohydrate crystal adhesion
GSE57539 lncRNA and mRNA expression of cytokine treated MDA-MB-231 cells
GSE58828 Human gastric mucosa: 3 paired hTERT-negative para cancerous tissue (Control) vs. hTERT-positive gastric cancer tissue
GSE61015 Long non-coding RNAs are differentially expressed in hepatocellular carcinoma cell lines with different metastatic potential
GSE64631 Pseudogene INTS6P1 regulates its cognate gene INTS6 through competitive binding of miR-17-5p in hepatocellular carcinoma [mRNA, lncRNA]
GSE64633 Pseudogene INTS6P1 regulates its cognate gene INTS6 through competitive binding of miR-17-5p in hepatocellular carcinoma
GSE67008 PARTICLE - a triplex-forming long ncRNA regulates locus specific methylation in response to low dose irradiation
GSE67567 Noncoding RNAs in human intervertebral disc degeneration: an integrated microarray study
GSE68506 LncRNA expression profiling for 6 human plasma samples from Coronary Artery Disease patients and non Coronary Artery Disease patients
GSE69587 LncRNA expression profiling for 6 human monocytes samples from Coronary Artery Disease patients and non Coronary Artery Disease patients
GSE72305 Gene expression-based identification of differential expression genes on gastric cancer samples with or without lymph node metastasis
GSE72307 KIF26B promotes proliferation and metastasis by activating the VEGF signaling pathway in gastric cancer
GSE74794 The methyl binding domain 3 (MBD3) family proteins promote Tet2 enzymatic activity for mediating 5mC conversion [microarray]
GSE74915 The methyl binding domain 3 (MBD3) family proteins promote Tet2 enzymatic activity for mediating 5mC conversion
GSE77387 Development of gene expression in inflammatory bowel disease
GSE77531 Gene expression signatures and pathway analysis of esophageal squamous cell carcinoma
GSE80209 CD54–NOTCH1 axis controls tumor initiation and cancer stem cell functions in human prostate cancer
GSE80266 Novel long non-coding RNAs in breast cancer
GSE80696 Differential transcriptome expression in human nucleus accumbens as a function of loneliness
GSE81034 Measuring lncRNAs in Exosomes from Prostate Cancer Cell Lines
GSE83955 Bladder cancer lncRNA expression profiling
GSE93512 Circulating long noncoding RNAs INHBA-AS1, MIR4435-2HG, CEBPA-AS1, and AK001058 in plasma serve as diagnostic markers for gastric cancer
GSE95166 lncRNA expression of in NPC and para carcinoma tissues
GSE95667 Integrated analysis of long non-coding RNAs expression profiles in tumor and adjacent gastric tissues
GSE101094 LncRNA/mRNA expression in pancreatic ductal adenocarcinoma (PDAC) and mached non-tumor tissues
GSE103254 Thyroid cancer: tumor vs. precancerous lesions
GSE103578 lncRNA and mRNA expression profiles in fibroblast-like synoviocytes from rheumatoid arthritis patients and trauma patients
GSE108262 Comparison of STEEL siRNA-treated and control siRNA-treated human endothelial cells
GSE108321 Angiogenic patterning by STEEL, an endothelial-enriched long noncoding RNA
GSE111762 Expression profiling of lncRNAs/mRNA for 16 human samples derived from patients with altrophic gastritis(Hp+) or gastric cancer(Hp+)
GSE117830 lncRNA expression in colon cancer cells and paired normal epithelial cells from five colon cancer patients
GSE135886 LncRNA and mRNA expression profiles in High-grade serous ovarian cancer, Low-grade serous ovarian cancer and Normal fallopian tube
GSE138809 LncRNA Expression Profiling in sinonasal squamous cell carcinomas
GSE151111 The lncRNA expression profiles in hepatocellular carcinoma cell lines under sulfatide treatment
GSE184903 Difference of LncRNAs expression between colorectal tumor tissues and paracancer normal intestinal mucosal tissues
Relations Alternative to
GPL13825 (Feature Number version)
Data table header descriptions ID probe name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
ENSEMBL_ID EnsemblID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
SPOT_ID SEQUENCE Probe Sequence
Data table ID SPOT_ID CONTROL_TYPE ENSEMBL_ID ACCESSION_STRING CHROMOSOMAL_LOCATION SPOT_ID SEQUENCE ASHG19A3A000001
ASHG19A3A000001
FALSE
unmapped
--unmapped
GGGCTCTTTTCTTCTACTGTATTTTCTAATTGTTCGTTCATATATGGGACAGGGTTTTAA
ASHG19A3A000002
ASHG19A3A000002
FALSE
unmapped
--unmapped
AGAAGGCAAAAGGCTGGCAGCTCACGCAGGGTTCTGGAGGCTGGGAAGTTCAAGACCAAT
ASHG19A3A000003
ASHG19A3A000003
FALSE
unmapped
--unmapped
GCTGCTGCAAAGGACCGATCGGCGGGTACCGTACAGAGTGGATTTGCAGGGCAGTGGCAT
ASHG19A3A000004
ASHG19A3A000004
FALSE
unmapped
--unmapped
GGTACTTGGAGTCTGGACATCTGAAACTTGGCTCTGAAACTGCGGAGCGGCCACCGGACG
ASHG19A3A000005
ASHG19A3A000005
FALSE
unmapped
--unmapped
AGAAAAGTCTAAACTTGTCATTCAGAACCTCACAAAAATAATCATTTAAAAAACAACCAT
ASHG19A3A000006
ASHG19A3A000006
FALSE
unmapped
--unmapped
GAAAATTATTTTAATTGATTCTGAACAATTGCTTCCCACAAAGTTGCCAACTGGACTCTG
ASHG19A3A000007
ASHG19A3A000007
FALSE
unmapped
--unmapped
CCCTGCCAGCCGCCCTGTCCGGGAGGGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGA
ASHG19A3A000008
ASHG19A3A000008
FALSE
unmapped
--unmapped
TGGAGGAGAGTGCTGGTGAATGGCAGCAAGAGGAAGGATATACTTCCCATAAGGGGACAA
ASHG19A3A000009
ASHG19A3A000009
FALSE
unmapped
--unmapped
TGTTTACGTGGCCCCTGCTCTCACCCACAACTCCAGGTTTCTGGCTCTCGGGAATTTGAG
ASHG19A3A000010
ASHG19A3A000010
FALSE
unmapped
--unmapped
AGGGATCAGCAAACTTGCTGTAAAGAGCCAGAGTTGTCTGCTGGTTCTCAGCTTGAAGAA
ASHG19A3A000011
ASHG19A3A000011
FALSE
unmapped
--unmapped
CCTCGCCCAGCCACCCGAGTAAATGCCCCTTTCTTCCCTTGATCTAAGAAGGTTGCTCCG
ASHG19A3A000012
ASHG19A3A000012
FALSE
unmapped
--unmapped
CCTTTCCTCTTGTGTTTTCAAAACATGTTCAATTCTCTTCTTAGTGGTGTGGATAAAAGC
ASHG19A3A000013
ASHG19A3A000013
FALSE
unmapped
--unmapped
AATGGAAAGGAAGGAGAAAATGGAGTTCACTATCAGTAGCTTTTGCACTGGTCTGCCCTT
ASHG19A3A000014
ASHG19A3A000014
FALSE
unmapped
--unmapped
TTTGTCCACTCAAGGAACTAGCCTGAGGATAGGCAACAACACTGAAACATCTCTCAAAGC
ASHG19A3A000015
ASHG19A3A000015
FALSE
unmapped
--unmapped
CACATGGCTGGGGTCTGAATCCTGCCTCATTACTCTCAATGATGAAATAGAATAGAGTAG
ASHG19A3A000016
ASHG19A3A000016
FALSE
unmapped
--unmapped
AGGAGGCTTTTTGCATCAATACAGGTCCTGGCCATGCCATCGGCAACCTGCTCGTCTTGT
ASHG19A3A000017
ASHG19A3A000017
FALSE
unmapped
--unmapped
CCTATATCACTGTGAGTATAAACACCCTTTACTATTACATGAAAATTGTGTTCAAGAGAG
ASHG19A3A000018
ASHG19A3A000018
FALSE
unmapped
--unmapped
ATTAAATCACTCTGGCTGCAGTTGAGGGAGGATTAGAGGGAACAAGACCTGGGGCAGGGG
ASHG19A3A000019
ASHG19A3A000019
FALSE
unmapped
--unmapped
GCAAAACTAATTTGACTGAAAGATGGTCTCATATATTTTCCAAACTCTCAGGCTTACATC
ASHG19A3A000020
ASHG19A3A000020
FALSE
unmapped
--unmapped
TGACGCTCTTCCCTCGTGCATCCTCCTGCCTGCGGCCCCTGGCCCCATGGGCACCTGAGG
60756 7204 Kbytes .Supplementary data files not provided
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