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Status
Public on Sep 25, 2012
Title
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: GATExplorer_Ensembl v57]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's protocol
Description
The probes were mapped to GENE LOCi by the CDF built by GATExplorerhttp://bioinfow.dep.usal.es/xgate/principal.php http://bioinfow.dep.usal.es/xgate/mapping/mapping.php http://bioinfow.dep.usal.es/xgate/mapping/mapping.php?content=rprogram
Submission date
Sep 25, 2012
Last update date
Jan 17, 2013
Contact name
Javier De Las Rivas
E-mail(s)
jrivas@usal.es Phone
34 923 294819
Organization name
Cancer Research Center (CiC-IBMCC)
Department
CSIC and University of Salamanca
Lab
Bioinformatics and Functional Genomics
Street address
Campus Miguel de Unamuno
City
Salamanca
ZIP/Postal code
37001
Country
Spain
Samples (62)
GSM1008967 , GSM1008968 , GSM1008969 , GSM1008970 , GSM1008971 , GSM1008972
GSM1008973 ,
GSM1008974 ,
GSM1008975 ,
GSM1008976 ,
GSM1008977 ,
GSM1008978 ,
GSM1008979 ,
GSM1008980 ,
GSM1008981 ,
GSM1008982 ,
GSM1008983 ,
GSM1008984 ,
GSM1008985 ,
GSM1008986 ,
GSM1008987 ,
GSM1008988 ,
GSM1008989 ,
GSM1008990 ,
GSM1008991 ,
GSM1122608 ,
GSM1122609 ,
GSM1122610 ,
GSM1122611 ,
GSM1122612 ,
GSM1122613 ,
GSM1122614 ,
GSM1122615 ,
GSM1122616 ,
GSM1122617 ,
GSM1122618 ,
GSM1122619 ,
GSM1122620 ,
GSM1122621 ,
GSM1122622 ,
GSM1122623 ,
GSM1122624 ,
GSM1122625 ,
GSM1122626 ,
GSM1122627 ,
GSM1122628 ,
GSM1122629 ,
GSM1122630 ,
GSM1122631 ,
GSM1122632 ,
GSM1122633 ,
GSM1122634 ,
GSM1122635 ,
GSM1122636 ,
GSM1122637 ,
GSM1122638 ,
GSM1122639 ,
GSM1122640 ,
GSM1122641 ,
GSM1122642 ,
GSM1122643 ,
GSM1122644 Series (3)
GSE41130 Expression profiling of Low-Risk Myelodysplastic Syndromes (MDSs)
GSE41216 Genome-wide profiling of methylation identifies novel targets with aberrant hypermethylation and reduced expression in low-risk myelodysplastic syndromes.
GSE46053 Transcriptomic signature induced in bone marrow Mesenchymal Stem/Stromal Cells (MSC) after interaction with malignant multiple myeloma cells: implications in myeloma progression.
Relations Alternative to
GPL570 (Alternative CDF [official])
Data table header descriptions ID ENSEMBL_GENE_ID
ORF Gene_symbol
Gene_Name SPOT_ID
Data table ID ORF Gene_Name SPOT_ID ENSG00000000003
TSPAN6 tetraspanin 6
ENSG00000000003 ENSG00000000005
TNMD tenomodulin
ENSG00000000005 ENSG00000000419
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
ENSG00000000419 ENSG00000000457
SCYL3 SCY1-like 3 (S. cerevisiae)
ENSG00000000457 ENSG00000000460
C1orf112 Uncharacterized protein C1orf112
ENSG00000000460 ENSG00000000938
FGR Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog
ENSG00000000938 ENSG00000000971
CFH complement factor H
ENSG00000000971 ENSG00000001036
FUCA2 fucosidase, alpha-L- 2, plasma
ENSG00000001036 ENSG00000001084
GCLC glutamate-cysteine ligase, catalytic subunit
ENSG00000001084 ENSG00000001167
NFYA nuclear transcription factor Y, alpha
ENSG00000001167 ENSG00000001460
C1orf201 UPF0490 protein C1orf201
ENSG00000001460 ENSG00000001461
NIPAL3 NIPA-like domain containing 3
ENSG00000001461 ENSG00000001497
LAS1L LAS1-like (S. cerevisiae)
ENSG00000001497 ENSG00000001561
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function)
ENSG00000001561 ENSG00000001617
SEMA3F sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
ENSG00000001617 ENSG00000001626
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
ENSG00000001626 ENSG00000001629
ANKIB1 ankyrin repeat and IBR domain containing 1
ENSG00000001629 ENSG00000001630
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
ENSG00000001630 ENSG00000001631
KRIT1 KRIT1, ankyrin repeat containing
ENSG00000001631 ENSG00000002016
RAD52 RAD52 homolog (S. cerevisiae)
ENSG00000002016
20596 1473 Kbytes .Supplementary file Size Download File type/resource GPL16100_probes2genes-HG_U133_Plus_2.txt.gz
6.5 Mb
(ftp) (http) TXT
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