GEO help: Mouse over screen elements for information.
Status
Public on Nov 28, 2012
Title
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [HuEx-1_0-st-v2.r2 ENST]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's web site
Description
This is identical to GPL5175 but a custom CDF environment was used to extract data. The probe group file can be found below.
Submission date
Nov 27, 2012
Last update date
Nov 28, 2012
Contact name
Raquel Ferreira Rodrigues
E-mail(s)
raquel.ubcsi@gmail.com Organization name
Molecular Medicine Institute
Lab
Cell Biology of the immune system
Street address
Av. Prof. Egas Moniz, Edifício Egas Moniz - Sala P3-A-16
City
Lisbon
ZIP/Postal code
1649-028
Country
Portugal
Samples (18)
GSM1045152 , GSM1045153 , GSM1045154 , GSM1045155 , GSM1045156 , GSM1045157
GSM5231150 ,
GSM5231151 ,
GSM5231152 ,
GSM5231153 ,
GSM5231154 ,
GSM5231155 ,
GSM5231156 ,
GSM5231157 ,
GSM5231158 ,
GSM5231159 ,
GSM5231160 ,
GSM5231161 Series (2)
GSE42561 Genome-wide differences in expression and alternative splicing in human dendritic cells upon E.coli challenge
GSE171709 Differential Effects of Estradiol on Progenitor -Smooth Muscle Cell and -Endothelial Cell Growth and Gene Response.
Relations Alternative to
GPL5175 (Alternative CDF [official])
Data table header descriptions ID Ensembl transcript identifier
Definition Symbol Transcript_cluster_ids Constitutive_exons_used Constitutive_IDs_used Putative microRNA binding sites Select Cellular Compartments Select Protein Classes Chromosome Strand Genomic Gene Corrdinates GO-Biological Process GO-Molecular Function GO-Cellular Component WikiPathways SPOT_ID Ensembl transcript identifier
Data table ID Definition Symbol Transcript_cluster_ids Constitutive_exons_used Constitutive_IDs_used Putative microRNA binding sites Select Cellular Compartments Select Protein Classes Chromosome Strand Genomic Gene Corrdinates GO-Biological Process GO-Molecular Function GO-Cellular Component WikiPathways SPOT_ID ENSG00000110514
MAP-kinase activating death domain [Source:HGNC Symbol;Acc:6766]
MADD
3329724
ENSE00000713325|ENSE00001599514|ENSE00001931214|ENSE00000839266|ENSE00001614721|ENSE00001633080|ENSE00001678700|ENSE00002147100|ENSE00002192903|ENSE00000839270|ENSE00001873919|ENSE00000921216|ENSE00001933383|ENSE00000921218|ENSE00000921221|ENSE00000921222|ENSE00000921224|ENSE00000921224|ENSE00001521423|ENSE00002168695|ENSE00000921226|ENSE00002151905|ENSE00002200798|ENSE00000921229|ENSE00002174094|ENSE00000921230|ENSE00000921231|ENSE00002201356|ENSE00000921233|ENSE00002199901|ENSE00000921236|ENSE00000921238|ENSE00000921239|ENSE00002160195|ENSE00000921241|ENSE00002168378|ENSE00000921242|ENSE00001624860|ENSE00001662389|ENSE00002186195|ENSE00000921245|ENSE00000921247|ENSE00000921248|ENSE00000921250|ENSE00000921251|ENSE00000921253|ENSE00000921256|ENSE00000921258|ENSE00001931557|ENSE00000921260|ENSE00001847416|ENSE00001882151|ENSE00001305698|ENSE00001944284|ENSE00001316877|ENSE00001918476|ENSE00001326771|ENSE00001917189|ENSE00001364823|ENSE00001385721|ENSE00001829773|ENSE00002150626|ENSE00001387749|ENSE00001591997|ENSE00001740308|ENSE00001838645|ENSE00001690987|ENSE00001736224|ENSE00001736851|ENSE00001796417|ENSE00001875208|ENSE00002296125|ENSE00002303010|ENSE00001736851|ENSE00001796417|ENSE00002303010|ENSE00001886370|ENSE00001917189|ENSE00002160195
3329725|3329726|3329728|3329731|3329732|3329734|3329735|3329736|3329737|3329738|3329739|3329740|3329741|3329742|3329743|3329744|3329745|3329746|3329747|3329748|3329749|3329750|3329751|3329754|3329755|3329756|3329760|3329761|3329765|3329766|3329768|3329770|3329771|3329772|3329773|3329776|3329777|3329779|3329781|3329782|3329783|3329784|3329785|3329786|3329787|3329789|3329791|3329792
hsa-let-7d(RNAhybrid|miRanda), hsa-let-7e(RNAhybrid|miRanda), hsa-let-7g(RNAhybrid|miRanda), hsa-let-7i(RNAhybrid|miRanda), hsa-miR-103(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-107(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-10b(RNAhybrid|miRanda), hsa-miR-124a(miRanda), hsa-miR-125a(RNAhybrid|miRanda|pictar), hsa-miR-125b(RNAhybrid|miRanda|pictar), hsa-miR-127(RNAhybrid|miRanda), hsa-miR-128a(RNAhybrid|miRanda), hsa-miR-128b(RNAhybrid|miRanda), hsa-miR-130a*(mirbase), hsa-miR-133a(RNAhybrid|miRanda), hsa-miR-133b(RNAhybrid), hsa-miR-136(RNAhybrid|miRanda), hsa-miR-138(RNAhybrid|miRanda), hsa-miR-140(RNAhybrid|miRanda), hsa-miR-141(TargetScan|miRanda), hsa-miR-148a(RNAhybrid|miRanda), hsa-miR-148b(RNAhybrid|miRanda), hsa-miR-149(RNAhybrid|miRanda), hsa-miR-150(RNAhybrid|miRanda), hsa-miR-151(RNAhybrid|miRanda), hsa-miR-152(RNAhybrid|miRanda), hsa-miR-15a(RNAhybrid|TargetScan|miRanda), hsa-miR-15b(RNAhybrid|TargetScan|miRanda), hsa-miR-16(RNAhybrid|TargetScan|miRanda), hsa-miR-17*(mirbase), hsa-miR-17-3p(RNAhybrid|TargetScan|miRanda), hsa-miR-181a(TargetScan|miRanda), hsa-miR-181abcd(TargetScan), hsa-miR-181b(TargetScan|miRanda), hsa-miR-181c(miRanda), hsa-miR-181d(miRanda), hsa-miR-183(RNAhybrid|miRanda), hsa-miR-184(RNAhybrid|miRanda), hsa-miR-185(RNAhybrid|TargetScan|miRanda), hsa-miR-187(RNAhybrid|mirbase), hsa-miR-188(RNAhybrid|miRanda), hsa-miR-18a*(RNAhybrid|miRanda), hsa-miR-191*(RNAhybrid), hsa-miR-193a(RNAhybrid|miRanda), hsa-miR-193b(RNAhybrid|miRanda), hsa-miR-195(RNAhybrid|TargetScan|miRanda), hsa-miR-196a(RNAhybrid|miRanda), hsa-miR-196b(RNAhybrid|miRanda), hsa-miR-197(RNAhybrid|miRanda), hsa-miR-198(RNAhybrid|miRanda), hsa-miR-199a(RNAhybrid|miRanda), hsa-miR-199a*(RNAhybrid|miRanda), hsa-miR-199b(RNAhybrid|miRanda), hsa-miR-19a(RNAhybrid|TargetScan|miRanda), hsa-miR-19b(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-200a(RNAhybrid|TargetScan|miRanda), hsa-miR-200b(RNAhybrid|miRanda), hsa-miR-200c(RNAhybrid), hsa-miR-202(RNAhybrid|miRanda), hsa-miR-204(RNAhybrid|miRanda), hsa-miR-205(RNAhybrid|miRanda), hsa-miR-206(RNAhybrid|miRanda), hsa-miR-210(RNAhybrid|miRanda), hsa-miR-211(RNAhybrid|miRanda), hsa-miR-212(RNAhybrid|miRanda), hsa-miR-214(RNAhybrid|TargetScan|miRanda), hsa-miR-22(RNAhybrid|TargetScan|miRanda), hsa-miR-220(TargetScan|miRanda|mirbase), hsa-miR-23a(miRanda), hsa-miR-23abc(TargetScan), hsa-miR-23b(miRanda), hsa-miR-23b-3p(TargetScan), hsa-miR-24(RNAhybrid|miRanda), hsa-miR-296(RNAhybrid|miRanda), hsa-miR-298(mirbase), hsa-miR-299-3p(TargetScan|miRanda), hsa-miR-299-5p(RNAhybrid|miRanda), hsa-miR-29a(RNAhybrid|miRanda), hsa-miR-31(miRanda), hsa-miR-323(RNAhybrid|miRanda), hsa-miR-324-3p(RNAhybrid|miRanda), hsa-miR-326(RNAhybrid|miRanda), hsa-miR-328(RNAhybrid|miRanda), hsa-miR-330(RNAhybrid), hsa-miR-331(RNAhybrid), hsa-miR-335(RNAhybrid|miRanda), hsa-miR-337(RNAhybrid|miRanda), hsa-miR-339(RNAhybrid|miRanda), hsa-miR-340(miRanda), hsa-miR-342-3p(miRanda), hsa-miR-346(RNAhybrid|miRanda), hsa-miR-34b(RNAhybrid|TargetScan|miRanda), hsa-miR-34c(RNAhybrid|miRanda), hsa-miR-363*(RNAhybrid|miRanda), hsa-miR-365(RNAhybrid|miRanda), hsa-miR-367(miRanda), hsa-miR-368(RNAhybrid|miRanda), hsa-miR-370(RNAhybrid|miRanda), hsa-miR-376a(RNAhybrid|miRanda), hsa-miR-376b(RNAhybrid|miRanda), hsa-miR-377(TargetScan|miRanda|mirbase), hsa-miR-378(RNAhybrid|TargetScan|miRanda), hsa-miR-411(RNAhybrid|miRanda), hsa-miR-424(RNAhybrid|TargetScan|miRanda), hsa-miR-425-3p(miRanda), hsa-miR-425-5p(RNAhybrid|miRanda), hsa-miR-4262(TargetScan), hsa-miR-431(miRanda), hsa-miR-449(RNAhybrid|miRanda), hsa-miR-449b(RNAhybrid|miRanda), hsa-miR-451(RNAhybrid), hsa-miR-452(RNAhybrid|miRanda), hsa-miR-452*(RNAhybrid|miRanda), hsa-miR-454-5p(RNAhybrid|miRanda), hsa-miR-455(RNAhybrid|miRanda), hsa-miR-483(RNAhybrid|TargetScan|miRanda), hsa-miR-485-5p(RNAhybrid|TargetScan|miRanda), hsa-miR-486-5p(miRanda), hsa-miR-490(miRanda), hsa-miR-491-5p(miRanda), hsa-miR-497(RNAhybrid|TargetScan|miRanda), hsa-miR-498(RNAhybrid|miRanda), hsa-miR-499(RNAhybrid|miRanda), hsa-miR-500(RNAhybrid|miRanda), hsa-miR-501(RNAhybrid|miRanda), hsa-miR-503(RNAhybrid|miRanda), hsa-miR-504(RNAhybrid|miRanda), hsa-miR-510(RNAhybrid|miRanda), hsa-miR-511(RNAhybrid|miRanda), hsa-miR-512-5p(RNAhybrid|miRanda), hsa-miR-513(RNAhybrid|miRanda), hsa-miR-514(RNAhybrid|miRanda), hsa-miR-515-3p(RNAhybrid|miRanda), hsa-miR-516-3p(RNAhybrid|miRanda), hsa-miR-516a-3p(mirbase), hsa-miR-516a-5p(mirbase), hsa-miR-517a(TargetScan|miRanda|mirbase), hsa-miR-517c(TargetScan|miRanda), hsa-miR-518c*(RNAhybrid|miRanda), hsa-miR-518f*(RNAhybrid|miRanda), hsa-miR-519e(RNAhybrid|miRanda), hsa-miR-520b(RNAhybrid|miRanda), hsa-miR-520c(miRanda), hsa-miR-520e(RNAhybrid|miRanda), hsa-miR-520f(RNAhybrid|miRanda), hsa-miR-520g(RNAhybrid|miRanda), hsa-miR-525(RNAhybrid|miRanda), hsa-miR-526a(RNAhybrid|miRanda), hsa-miR-526b(TargetScan|miRanda), hsa-miR-526b*(miRanda), hsa-miR-526c(RNAhybrid|miRanda), hsa-miR-532(RNAhybrid|miRanda), hsa-miR-542-3p(miRanda), hsa-miR-542-5p(RNAhybrid|miRanda), hsa-miR-543(miRanda), hsa-miR-550(RNAhybrid|miRanda), hsa-miR-551a(RNAhybrid), hsa-miR-551b(RNAhybrid|miRanda), hsa-miR-552(miRanda), hsa-miR-562(RNAhybrid|miRanda), hsa-miR-563(RNAhybrid|miRanda), hsa-miR-564(RNAhybrid|miRanda), hsa-miR-565(RNAhybrid|miRanda), hsa-miR-574(RNAhybrid|TargetScan|miRanda), hsa-miR-574-3p(mirbase), hsa-miR-575(RNAhybrid|miRanda), hsa-miR-582-3p(mirbase), hsa-miR-583(RNAhybrid|miRanda), hsa-miR-585(RNAhybrid), hsa-miR-588(RNAhybrid|miRanda), hsa-miR-593(RNAhybrid|miRanda), hsa-miR-596(TargetScan|miRanda), hsa-miR-597(RNAhybrid|miRanda), hsa-miR-604(RNAhybrid|miRanda), hsa-miR-605(RNAhybrid|miRanda), hsa-miR-608(RNAhybrid|miRanda), hsa-miR-609(RNAhybrid|miRanda), hsa-miR-610(RNAhybrid|miRanda), hsa-miR-612(RNAhybrid|TargetScan|miRanda), hsa-miR-615(RNAhybrid|miRanda), hsa-miR-619(RNAhybrid|miRanda), hsa-miR-622(RNAhybrid|miRanda), hsa-miR-623(RNAhybrid|miRanda), hsa-miR-629(RNAhybrid|miRanda), hsa-miR-636(RNAhybrid|miRanda), hsa-miR-637(RNAhybrid|miRanda), hsa-miR-638(RNAhybrid|miRanda), hsa-miR-639(RNAhybrid|miRanda|mirbase), hsa-miR-641(RNAhybrid|miRanda), hsa-miR-642(RNAhybrid), hsa-miR-645(RNAhybrid|miRanda), hsa-miR-646(RNAhybrid|miRanda), hsa-miR-647(RNAhybrid|miRanda), hsa-miR-652(RNAhybrid), hsa-miR-654(RNAhybrid|miRanda), hsa-miR-657(RNAhybrid|miRanda), hsa-miR-658(RNAhybrid|miRanda), hsa-miR-661(RNAhybrid|miRanda), hsa-miR-663(RNAhybrid|miRanda), hsa-miR-668(RNAhybrid), hsa-miR-675(RNAhybrid|miRanda), hsa-miR-758(RNAhybrid|miRanda), hsa-miR-765(RNAhybrid|miRanda), hsa-miR-767-3p(RNAhybrid|miRanda), hsa-miR-768-5p(RNAhybrid|miRanda), hsa-miR-769-3p(RNAhybrid|miRanda), hsa-miR-769-5p(RNAhybrid|miRanda), hsa-miR-801(RNAhybrid|miRanda|mirbase), hsa-miR-99b(RNAhybrid)
transmembrane
protein_coding
chr11
+
47290776-47351236
activation of MAPK activity // regulation of cell cycle // cell surface receptor linked signaling pathway // regulation of apoptosis // positive regulation of protein phosphorylation
death receptor binding // guanyl-nucleotide exchange factor activity // Rab guanyl-nucleotide exchange factor activity // protein kinase activator activity // protein binding
cytoplasm // integral to membrane // plasma membrane
TNF alpha Signaling Pathway:WP231
ENSG00000110514 ENSG00000086015
microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:19035]
MAST2
2334476
ENSE00001744936|ENSE00001795090|ENSE00001816991|ENSE00001845841|ENSE00001903299|ENSE00002542436|ENSE00002569872
2334515
hsa-let-7d*(mirbase), hsa-let-7i*(mirbase), hsa-miR-103(RNAhybrid|miRanda), hsa-miR-106a(miRanda), hsa-miR-106b(miRanda), hsa-miR-107(RNAhybrid|miRanda), hsa-miR-122(miRanda), hsa-miR-125a(RNAhybrid|miRanda), hsa-miR-125b(RNAhybrid|miRanda), hsa-miR-127(RNAhybrid|miRanda), hsa-miR-130a(miRanda|mirbase), hsa-miR-130ac(TargetScan), hsa-miR-130b(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-133a(RNAhybrid|miRanda), hsa-miR-133b(RNAhybrid|miRanda), hsa-miR-141(RNAhybrid|miRanda), hsa-miR-146b-3p(mirbase), hsa-miR-148a(miRanda), hsa-miR-148b(miRanda), hsa-miR-149(RNAhybrid|miRanda), hsa-miR-152(miRanda), hsa-miR-17(miRanda), hsa-miR-183(RNAhybrid|miRanda), hsa-miR-184(miRanda), hsa-miR-185*(mirbase), hsa-miR-186*(mirbase), hsa-miR-191*(RNAhybrid|miRanda|mirbase), hsa-miR-193b(miRanda), hsa-miR-19a(RNAhybrid), hsa-miR-19b(RNAhybrid), hsa-miR-202(mirbase), hsa-miR-203(miRanda), hsa-miR-206(RNAhybrid|miRanda), hsa-miR-20a(miRanda), hsa-miR-20b(miRanda), hsa-miR-21(RNAhybrid|miRanda|mirbase), hsa-miR-22(miRanda), hsa-miR-221(miRanda|mirbase), hsa-miR-222(RNAhybrid|miRanda), hsa-miR-223*(mirbase), hsa-miR-23a(miRanda), hsa-miR-23b(miRanda), hsa-miR-24(RNAhybrid|TargetScan|miRanda), hsa-miR-25(RNAhybrid|miRanda|mirbase), hsa-miR-27a*(mirbase), hsa-miR-27b*(mirbase), hsa-miR-28(RNAhybrid|miRanda), hsa-miR-28-5p(miRanda), hsa-miR-296(RNAhybrid|miRanda), hsa-miR-29b-2*(mirbase), hsa-miR-29c*(mirbase), hsa-miR-300(miRanda), hsa-miR-301(RNAhybrid|TargetScan), hsa-miR-301a(miRanda|mirbase), hsa-miR-301ab(TargetScan), hsa-miR-301b(TargetScan|miRanda|mirbase), hsa-miR-301b-3p(TargetScan), hsa-miR-302a(miRanda), hsa-miR-302b(miRanda), hsa-miR-302c(miRanda), hsa-miR-302d(miRanda), hsa-miR-30a(miRanda), hsa-miR-30b(miRanda), hsa-miR-30c(miRanda), hsa-miR-30d(miRanda), hsa-miR-30e(miRanda), hsa-miR-31(RNAhybrid|miRanda), hsa-miR-31*(mirbase), hsa-miR-32(mirbase), hsa-miR-320(RNAhybrid|miRanda), hsa-miR-320a(miRanda), hsa-miR-320b(miRanda), hsa-miR-320c(miRanda), hsa-miR-320d(miRanda), hsa-miR-324-3p(RNAhybrid|miRanda), hsa-miR-326(RNAhybrid|miRanda), hsa-miR-328(RNAhybrid|miRanda), hsa-miR-331(RNAhybrid|TargetScan|miRanda), hsa-miR-339(RNAhybrid|miRanda), hsa-miR-339-5p(miRanda), hsa-miR-34a(RNAhybrid|miRanda), hsa-miR-363(mirbase), hsa-miR-365(miRanda), hsa-miR-3666(TargetScan), hsa-miR-370(RNAhybrid|miRanda), hsa-miR-378(RNAhybrid|miRanda), hsa-miR-379(RNAhybrid), hsa-miR-380*(mirbase), hsa-miR-381(miRanda), hsa-miR-383(RNAhybrid|miRanda), hsa-miR-409-5p(RNAhybrid|miRanda|mirbase), hsa-miR-422a(RNAhybrid|miRanda), hsa-miR-423(RNAhybrid|miRanda), hsa-miR-424(mirbase), hsa-miR-4295(TargetScan), hsa-miR-431(RNAhybrid|miRanda|mirbase), hsa-miR-432*(RNAhybrid|miRanda), hsa-miR-452*(mirbase), hsa-miR-454(TargetScan|miRanda|mirbase), hsa-miR-483(RNAhybrid|miRanda), hsa-miR-484(RNAhybrid), hsa-miR-485-5p(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-486-3p(mirbase), hsa-miR-488(miRanda), hsa-miR-490(RNAhybrid|miRanda), hsa-miR-491-5p(miRanda), hsa-miR-493-3p(RNAhybrid|miRanda), hsa-miR-497(RNAhybrid), hsa-miR-500(RNAhybrid|miRanda), hsa-miR-501-3p(mirbase), hsa-miR-503(RNAhybrid|miRanda), hsa-miR-504(RNAhybrid|miRanda), hsa-miR-505*(mirbase), hsa-miR-510(RNAhybrid|miRanda), hsa-miR-511(RNAhybrid|miRanda), hsa-miR-512-5p(RNAhybrid|miRanda), hsa-miR-513(RNAhybrid|miRanda), hsa-miR-515-3p(RNAhybrid|miRanda), hsa-miR-516-5p(RNAhybrid|TargetScan|miRanda), hsa-miR-519d(miRanda), hsa-miR-520a*(RNAhybrid), hsa-miR-520a-3p(miRanda), hsa-miR-520b(miRanda), hsa-miR-520c-3p(miRanda), hsa-miR-520d-3p(miRanda), hsa-miR-520e(miRanda), hsa-miR-525(RNAhybrid), hsa-miR-526b(RNAhybrid|miRanda), hsa-miR-548b(miRanda), hsa-miR-556-3p(mirbase), hsa-miR-565(RNAhybrid|miRanda), hsa-miR-571(RNAhybrid|miRanda), hsa-miR-572(RNAhybrid|miRanda), hsa-miR-579(mirbase), hsa-miR-584(RNAhybrid|miRanda), hsa-miR-585(mirbase), hsa-miR-588(RNAhybrid|miRanda), hsa-miR-590-5p(mirbase), hsa-miR-593(RNAhybrid), hsa-miR-598(RNAhybrid|miRanda), hsa-miR-602(RNAhybrid|miRanda|mirbase), hsa-miR-604(RNAhybrid|miRanda), hsa-miR-605(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-606(mirbase), hsa-miR-608(RNAhybrid), hsa-miR-612(RNAhybrid|miRanda), hsa-miR-613(RNAhybrid|miRanda|mirbase), hsa-miR-614(RNAhybrid|miRanda), hsa-miR-615(RNAhybrid|miRanda), hsa-miR-617(RNAhybrid|miRanda), hsa-miR-619(RNAhybrid|miRanda), hsa-miR-623(RNAhybrid|miRanda), hsa-miR-625(RNAhybrid|miRanda), hsa-miR-631(RNAhybrid|miRanda), hsa-miR-635(RNAhybrid|miRanda), hsa-miR-637(RNAhybrid|miRanda), hsa-miR-638(RNAhybrid|miRanda), hsa-miR-650(RNAhybrid), hsa-miR-652(RNAhybrid|miRanda), hsa-miR-653(miRanda), hsa-miR-654(RNAhybrid|miRanda), hsa-miR-656(mirbase), hsa-miR-657(RNAhybrid|miRanda), hsa-miR-663(RNAhybrid|miRanda), hsa-miR-708(miRanda), hsa-miR-721(TargetScan), hsa-miR-769-3p(RNAhybrid|miRanda), hsa-miR-876-3p(mirbase), hsa-miR-9(mirbase), hsa-miR-92(RNAhybrid), hsa-miR-92a(mirbase), hsa-miR-92a-1*(mirbase), hsa-miR-92b(mirbase), hsa-miR-93(miRanda), hsa-miR-938(mirbase)
kinase|protein_coding
chr1
+
46252679-46501862
protein phosphorylation // regulation of interleukin-12 biosynthetic process // spermatid differentiation
microtubule binding // magnesium ion binding // nucleotide binding // protein serine/threonine kinase activity // phosphatase binding // protein tyrosine kinase activity // protein binding // protein kinase activity // ATP binding
cytoplasm // cytoskeleton // microtubule cytoskeleton // plasma membrane
ENSG00000086015 ENSG00000254148
RP11-84E24.2
3769547
ENSE00002214461|ENSE00002223848|ENSE00002300466
3769557
lincRNA
chr17
-
70036219-70053774
ENSG00000254148 ENSG00000070770
casein kinase 2, alpha prime polypeptide [Source:HGNC Symbol;Acc:2459]
CSNK2A2
3693533
ENSE00000686546|ENSE00000686582|ENSE00000686599|ENSE00001047027|ENSE00001100822|ENSE00001100834|ENSE00001100839|ENSE00001100853|ENSE00001100856|ENSE00001308353|M55268-2|ENSE00001658985
3693571|3693569|3693567|3693564|3693561|3693556|3693555|3693553|3693552|3693550|3693549|3693547
hsa-let-7b(RNAhybrid|miRanda), hsa-let-7e*(mirbase), hsa-miR-100(RNAhybrid|miRanda), hsa-miR-122a(RNAhybrid|miRanda), hsa-miR-124a(RNAhybrid|miRanda), hsa-miR-130a*(mirbase), hsa-miR-133a(RNAhybrid|miRanda), hsa-miR-133b(RNAhybrid|miRanda), hsa-miR-146a(miRanda), hsa-miR-146b(RNAhybrid|miRanda), hsa-miR-146b-5p(miRanda), hsa-miR-149(RNAhybrid|miRanda), hsa-miR-150(miRanda), hsa-miR-16(mirbase), hsa-miR-181a(RNAhybrid|miRanda), hsa-miR-181b(RNAhybrid|miRanda), hsa-miR-181c(miRanda), hsa-miR-181d(RNAhybrid|miRanda), hsa-miR-182*(pictar), hsa-miR-185(RNAhybrid), hsa-miR-185*(mirbase), hsa-miR-18a*(RNAhybrid|TargetScan|miRanda), hsa-miR-190(miRanda), hsa-miR-190b(miRanda), hsa-miR-191(RNAhybrid|miRanda), hsa-miR-191*(RNAhybrid|miRanda), hsa-miR-193a(RNAhybrid|miRanda), hsa-miR-193b(RNAhybrid|miRanda), hsa-miR-194(RNAhybrid|miRanda|mirbase), hsa-miR-196a(RNAhybrid|miRanda), hsa-miR-199b(RNAhybrid|miRanda), hsa-miR-204(RNAhybrid|miRanda), hsa-miR-205(RNAhybrid|miRanda), hsa-miR-208(mirbase|pictar), hsa-miR-208a(miRanda), hsa-miR-208ab(TargetScan), hsa-miR-208ab-3p(TargetScan), hsa-miR-208b(miRanda|mirbase), hsa-miR-212(RNAhybrid|miRanda), hsa-miR-214(RNAhybrid), hsa-miR-214*(mirbase), hsa-miR-217(miRanda), hsa-miR-22(RNAhybrid|miRanda), hsa-miR-221(mirbase), hsa-miR-222(RNAhybrid|miRanda), hsa-miR-224(RNAhybrid), hsa-miR-23a(RNAhybrid|TargetScan|miRanda|mirbase|pictar), hsa-miR-23abc(TargetScan), hsa-miR-23b(RNAhybrid|TargetScan|miRanda|mirbase|pictar), hsa-miR-23b-3p(TargetScan), hsa-miR-27b(RNAhybrid|miRanda), hsa-miR-296(RNAhybrid|miRanda), hsa-miR-299-3p(RNAhybrid|miRanda), hsa-miR-31*(mirbase), hsa-miR-323-5p(mirbase), hsa-miR-324-3p(RNAhybrid|miRanda), hsa-miR-338-5p(mirbase), hsa-miR-339(RNAhybrid|miRanda), hsa-miR-340(RNAhybrid|miRanda), hsa-miR-346(RNAhybrid|miRanda|pictar), hsa-miR-34c(RNAhybrid|miRanda), hsa-miR-365(mirbase), hsa-miR-371(RNAhybrid|TargetScan|miRanda), hsa-miR-371-3p(mirbase), hsa-miR-374a(miRanda), hsa-miR-374b(miRanda), hsa-miR-375(RNAhybrid|miRanda), hsa-miR-379*(mirbase), hsa-miR-380-3p(RNAhybrid), hsa-miR-411*(mirbase), hsa-miR-412(RNAhybrid|miRanda), hsa-miR-421(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-423-5p(mirbase), hsa-miR-425-3p(TargetScan|miRanda), hsa-miR-432(RNAhybrid|miRanda), hsa-miR-453(RNAhybrid|miRanda), hsa-miR-454-5p(RNAhybrid|miRanda), hsa-miR-485-5p(RNAhybrid|miRanda), hsa-miR-491(RNAhybrid|miRanda), hsa-miR-491-5p(miRanda), hsa-miR-499-5p(miRanda), hsa-miR-502(RNAhybrid|miRanda), hsa-miR-503(RNAhybrid), hsa-miR-504(RNAhybrid), hsa-miR-505(miRanda|mirbase), hsa-miR-512-3p(RNAhybrid|miRanda), hsa-miR-516-5p(RNAhybrid|miRanda), hsa-miR-518a(RNAhybrid|miRanda), hsa-miR-518e(miRanda), hsa-miR-520a*(RNAhybrid|miRanda), hsa-miR-523(RNAhybrid|miRanda), hsa-miR-524(RNAhybrid|miRanda), hsa-miR-541(mirbase), hsa-miR-542-5p(RNAhybrid|mirbase), hsa-miR-543(miRanda|mirbase), hsa-miR-544(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-548b(RNAhybrid|miRanda), hsa-miR-548d-5p(mirbase), hsa-miR-551a(RNAhybrid|miRanda), hsa-miR-552(RNAhybrid|miRanda), hsa-miR-555(RNAhybrid|miRanda), hsa-miR-560(RNAhybrid|miRanda), hsa-miR-565(RNAhybrid|miRanda), hsa-miR-566(RNAhybrid|miRanda), hsa-miR-584(RNAhybrid|miRanda), hsa-miR-588(RNAhybrid|miRanda), hsa-miR-589(mirbase), hsa-miR-592(RNAhybrid|miRanda), hsa-miR-596(RNAhybrid|miRanda), hsa-miR-599(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-601(TargetScan|miRanda|mirbase), hsa-miR-604(RNAhybrid|miRanda), hsa-miR-608(RNAhybrid|miRanda), hsa-miR-613(RNAhybrid|miRanda), hsa-miR-614(RNAhybrid|miRanda), hsa-miR-615(RNAhybrid|miRanda), hsa-miR-622(RNAhybrid|miRanda), hsa-miR-625(RNAhybrid|miRanda), hsa-miR-627(RNAhybrid), hsa-miR-628(RNAhybrid|miRanda), hsa-miR-629(RNAhybrid|miRanda), hsa-miR-632(TargetScan|miRanda|mirbase), hsa-miR-633(mirbase), hsa-miR-636(RNAhybrid|miRanda|mirbase), hsa-miR-637(RNAhybrid|miRanda), hsa-miR-642(RNAhybrid|miRanda), hsa-miR-649(RNAhybrid|miRanda), hsa-miR-654(RNAhybrid|TargetScan|miRanda), hsa-miR-654-5p(mirbase), hsa-miR-658(RNAhybrid), hsa-miR-661(RNAhybrid|miRanda), hsa-miR-662(RNAhybrid|miRanda), hsa-miR-663(RNAhybrid|miRanda), hsa-miR-671(RNAhybrid|TargetScan|miRanda), hsa-miR-671-5p(mirbase), hsa-miR-765(RNAhybrid|miRanda), hsa-miR-766(RNAhybrid|miRanda), hsa-miR-767-3p(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-767-5p(RNAhybrid|miRanda), hsa-miR-768-5p(RNAhybrid|miRanda), hsa-miR-873(miRanda), hsa-miR-875-3p(mirbase), hsa-miR-886-5p(mirbase), hsa-miR-9(RNAhybrid|miRanda), hsa-miR-92(RNAhybrid|miRanda), hsa-miR-92b(RNAhybrid|miRanda), hsa-miR-92b*(mirbase), hsa-miR-943(mirbase), hsa-miR-95(mirbase), hsa-miR-99a(RNAhybrid|miRanda)
nucleus
transcription regulator|kinase|protein_coding
chr16
-
58192273-58264588
protein phosphorylation // apoptosis // regulation of cell cycle // regulation of transcription, DNA-dependent // Wnt receptor signaling pathway // mitotic cell cycle spindle checkpoint // axon guidance
protein N-terminus binding // nucleotide binding // protein serine/threonine kinase activity // protein tyrosine kinase activity // protein binding // protein kinase activity // ATP binding
PcG protein complex // nucleus // cytosol
ENSG00000070770 ENSG00000169740
zinc finger protein 32 [Source:HGNC Symbol;Acc:13095]
ZNF32
3286393
ENSE00001463502|ENSE00001854752|ENSE00001857453|ENSE00001930286|ENSE00001463502|ENSE00001904235|ENSE00001930286|ENSE00001890491|ENSE00002553164|ENSE00002553391
3286402|3286401|3286398|3286397|3286396|3286394
hsa-miR-136(miRanda|mirbase), hsa-miR-146a(miRanda|mirbase), hsa-miR-146b-5p(miRanda|mirbase), hsa-miR-181b(mirbase), hsa-miR-181d(mirbase), hsa-miR-186*(mirbase), hsa-miR-200c*(mirbase), hsa-miR-205(mirbase), hsa-miR-223(mirbase), hsa-miR-340(miRanda), hsa-miR-374a(miRanda), hsa-miR-374b(miRanda), hsa-miR-376a(miRanda|mirbase), hsa-miR-376a*(mirbase), hsa-miR-376b(miRanda|mirbase), hsa-miR-376c(miRanda), hsa-miR-384(miRanda), hsa-miR-425*(mirbase), hsa-miR-432*(mirbase), hsa-miR-454*(mirbase), hsa-miR-485-3p(mirbase), hsa-miR-488(miRanda|mirbase), hsa-miR-516a-3p(mirbase), hsa-miR-520f(mirbase), hsa-miR-541*(mirbase), hsa-miR-548c-3p(mirbase), hsa-miR-587(mirbase), hsa-miR-624(mirbase), hsa-miR-625(mirbase), hsa-miR-630(mirbase), hsa-miR-659(mirbase), hsa-miR-873(miRanda), hsa-miR-874(mirbase)
nucleus
transcription regulator|protein_coding
chr10
-
44139368-44187901
regulation of transcription, DNA-dependent
zinc ion binding // DNA binding // metal ion binding
nucleus // intracellular
ENSG00000169740 ENSG00000215869
RP11-364B6.1
2349589
ENSE00001619009
2349599
processed_transcript
chr1
+
104615872-104619646
ENSG00000215869 ENSG00000169744
LIM domain binding 2 [Source:HGNC Symbol;Acc:6533]
LDB2
2762088
ENSE00001133541|ENSE00002021559|ENSE00002078840
2762123
hsa-let-7c(RNAhybrid|miRanda), hsa-miR-101(RNAhybrid|miRanda), hsa-miR-103(RNAhybrid|miRanda), hsa-miR-105(mirbase), hsa-miR-107(RNAhybrid|miRanda), hsa-miR-125a-3p(miRanda|mirbase), hsa-miR-127(RNAhybrid|miRanda), hsa-miR-1271(miRanda), hsa-miR-128(miRanda), hsa-miR-129-5p(miRanda), hsa-miR-130a(RNAhybrid), hsa-miR-133a(RNAhybrid|miRanda), hsa-miR-133b(RNAhybrid|miRanda), hsa-miR-135a(miRanda), hsa-miR-135a-5p(TargetScan), hsa-miR-135ab(TargetScan), hsa-miR-135b(miRanda), hsa-miR-140-5p(miRanda), hsa-miR-141(miRanda), hsa-miR-143(RNAhybrid|miRanda), hsa-miR-144(miRanda), hsa-miR-148a(miRanda), hsa-miR-148b(miRanda), hsa-miR-150(RNAhybrid|miRanda), hsa-miR-152(miRanda), hsa-miR-153(miRanda), hsa-miR-154*(RNAhybrid|miRanda), hsa-miR-182(miRanda), hsa-miR-183(miRanda), hsa-miR-185(miRanda), hsa-miR-186(miRanda), hsa-miR-187(RNAhybrid|miRanda), hsa-miR-188(RNAhybrid), hsa-miR-189(RNAhybrid|miRanda), hsa-miR-18a(RNAhybrid|miRanda), hsa-miR-18a*(RNAhybrid|TargetScan|miRanda), hsa-miR-18b(miRanda), hsa-miR-191(RNAhybrid|miRanda), hsa-miR-193b(RNAhybrid|miRanda), hsa-miR-194(RNAhybrid|miRanda), hsa-miR-197(RNAhybrid), hsa-miR-199a(RNAhybrid|miRanda), hsa-miR-199a-5p(mirbase), hsa-miR-199b(RNAhybrid|miRanda), hsa-miR-199b-5p(mirbase), hsa-miR-19a(miRanda), hsa-miR-19b(miRanda), hsa-miR-200a(miRanda), hsa-miR-20a(RNAhybrid|miRanda), hsa-miR-20b(RNAhybrid|miRanda), hsa-miR-221(miRanda), hsa-miR-222(miRanda), hsa-miR-224(miRanda), hsa-miR-23a(miRanda), hsa-miR-23b(miRanda), hsa-miR-24(RNAhybrid|miRanda), hsa-miR-25(miRanda), hsa-miR-27a(miRanda), hsa-miR-27b(RNAhybrid|miRanda), hsa-miR-296(RNAhybrid|miRanda), hsa-miR-299-5p(TargetScan|miRanda|mirbase), hsa-miR-29a(RNAhybrid|miRanda), hsa-miR-29b(RNAhybrid|miRanda), hsa-miR-29c(RNAhybrid|miRanda), hsa-miR-300(miRanda), hsa-miR-301(RNAhybrid|miRanda), hsa-miR-302c*(RNAhybrid|miRanda), hsa-miR-30b(miRanda), hsa-miR-32(miRanda), hsa-miR-320a(miRanda), hsa-miR-320b(miRanda), hsa-miR-320c(miRanda), hsa-miR-320d(miRanda), hsa-miR-324-3p(RNAhybrid|miRanda), hsa-miR-326(RNAhybrid|miRanda), hsa-miR-328(RNAhybrid), hsa-miR-329(miRanda), hsa-miR-33(RNAhybrid|miRanda), hsa-miR-331(RNAhybrid), hsa-miR-335(RNAhybrid|miRanda), hsa-miR-337(RNAhybrid|miRanda), hsa-miR-338(RNAhybrid|miRanda), hsa-miR-339(RNAhybrid|miRanda), hsa-miR-33a(miRanda), hsa-miR-340(RNAhybrid|miRanda), hsa-miR-340-5p(TargetScan), hsa-miR-345(RNAhybrid|miRanda), hsa-miR-34a(RNAhybrid|miRanda), hsa-miR-34b(RNAhybrid|miRanda), hsa-miR-34c(RNAhybrid|miRanda), hsa-miR-361-5p(miRanda), hsa-miR-362-3p(miRanda), hsa-miR-367(miRanda), hsa-miR-370(RNAhybrid|miRanda), hsa-miR-371(RNAhybrid|miRanda), hsa-miR-373(RNAhybrid|miRanda), hsa-miR-375(RNAhybrid|miRanda), hsa-miR-377(RNAhybrid|miRanda), hsa-miR-381(miRanda), hsa-miR-383(RNAhybrid|miRanda), hsa-miR-421(TargetScan|miRanda|mirbase), hsa-miR-424(RNAhybrid|miRanda), hsa-miR-431(RNAhybrid|miRanda), hsa-miR-448(miRanda), hsa-miR-449(RNAhybrid|miRanda), hsa-miR-449b(RNAhybrid|miRanda), hsa-miR-454-5p(RNAhybrid|miRanda), hsa-miR-455(RNAhybrid|miRanda), hsa-miR-484(RNAhybrid|miRanda), hsa-miR-485-5p(RNAhybrid|miRanda), hsa-miR-487a(RNAhybrid|TargetScan|mirbase), hsa-miR-487b(mirbase), hsa-miR-488(miRanda), hsa-miR-490(RNAhybrid|miRanda), hsa-miR-491(RNAhybrid), hsa-miR-492(RNAhybrid), hsa-miR-494(miRanda), hsa-miR-495(RNAhybrid|miRanda), hsa-miR-496(RNAhybrid|TargetScan|miRanda), hsa-miR-498(RNAhybrid|miRanda), hsa-miR-502(RNAhybrid|miRanda), hsa-miR-503(RNAhybrid|miRanda), hsa-miR-506(RNAhybrid|miRanda), hsa-miR-509(RNAhybrid|miRanda), hsa-miR-510(TargetScan|miRanda), hsa-miR-511(RNAhybrid|TargetScan), hsa-miR-512-3p(RNAhybrid|miRanda), hsa-miR-512-5p(RNAhybrid), hsa-miR-513(RNAhybrid|miRanda), hsa-miR-515-3p(RNAhybrid|miRanda), hsa-miR-515-5p(RNAhybrid), hsa-miR-516-5p(RNAhybrid|miRanda), hsa-miR-518c*(RNAhybrid|miRanda), hsa-miR-519b(RNAhybrid|miRanda), hsa-miR-519c(RNAhybrid|miRanda), hsa-miR-519e*(RNAhybrid|miRanda), hsa-miR-520b(RNAhybrid), hsa-miR-520c(RNAhybrid), hsa-miR-520d-3p(miRanda), hsa-miR-520e(RNAhybrid|miRanda), hsa-miR-520f(RNAhybrid), hsa-miR-521(RNAhybrid|miRanda), hsa-miR-525(RNAhybrid|miRanda), hsa-miR-526b(RNAhybrid|TargetScan|miRanda), hsa-miR-526b*(RNAhybrid|miRanda), hsa-miR-539(miRanda), hsa-miR-548b(RNAhybrid|TargetScan|miRanda), hsa-miR-548b-3p(mirbase), hsa-miR-552(RNAhybrid|miRanda), hsa-miR-554(RNAhybrid|miRanda), hsa-miR-558(RNAhybrid|miRanda), hsa-miR-564(RNAhybrid|miRanda), hsa-miR-566(RNAhybrid), hsa-miR-569(RNAhybrid|miRanda|mirbase), hsa-miR-571(RNAhybrid|TargetScan|miRanda), hsa-miR-572(RNAhybrid|miRanda), hsa-miR-575(RNAhybrid|miRanda), hsa-miR-576(RNAhybrid|TargetScan|miRanda), hsa-miR-586(RNAhybrid|miRanda), hsa-miR-588(RNAhybrid|miRanda), hsa-miR-590-3p(miRanda), hsa-miR-592(RNAhybrid|miRanda), hsa-miR-593(RNAhybrid|miRanda), hsa-miR-598(RNAhybrid|miRanda), hsa-miR-602(RNAhybrid|miRanda), hsa-miR-608(RNAhybrid|TargetScan|miRanda), hsa-miR-611(RNAhybrid|miRanda), hsa-miR-612(RNAhybrid|miRanda), hsa-miR-617(RNAhybrid|miRanda), hsa-miR-618(RNAhybrid|miRanda), hsa-miR-623(RNAhybrid|miRanda), hsa-miR-625(RNAhybrid|miRanda), hsa-miR-627(RNAhybrid|miRanda), hsa-miR-629(RNAhybrid|miRanda), hsa-miR-630(RNAhybrid|miRanda), hsa-miR-635(RNAhybrid|TargetScan|miRanda), hsa-miR-637(RNAhybrid), hsa-miR-642(RNAhybrid|miRanda), hsa-miR-649(RNAhybrid|miRanda), hsa-miR-653(RNAhybrid|TargetScan|miRanda), hsa-miR-654(RNAhybrid|miRanda), hsa-miR-655(RNAhybrid|miRanda), hsa-miR-658(RNAhybrid|miRanda), hsa-miR-661(RNAhybrid|TargetScan|miRanda), hsa-miR-662(RNAhybrid|miRanda), hsa-miR-663(RNAhybrid|miRanda), hsa-miR-671(RNAhybrid|TargetScan|miRanda), hsa-miR-675(RNAhybrid|miRanda), hsa-miR-7(RNAhybrid|miRanda), hsa-miR-765(miRanda), hsa-miR-767-3p(RNAhybrid|miRanda), hsa-miR-767-5p(RNAhybrid|miRanda), hsa-miR-768-3p(RNAhybrid|miRanda), hsa-miR-769-5p(RNAhybrid), hsa-miR-770-5p(RNAhybrid), hsa-miR-873(miRanda), hsa-miR-874(miRanda), hsa-miR-892a(mirbase), hsa-miR-93(RNAhybrid|miRanda), hsa-miR-95(RNAhybrid|miRanda), hsa-miR-96(miRanda|pictar)
protein_coding
chr4
-
16454851-16900288
hair follicle development // multicellular organismal development // positive regulation of transcription from RNA polymerase II promoter // somatic stem cell maintenance // epithelial structure maintenance // positive regulation of cellular component biogenesis
LIM domain binding // transcription factor binding transcription factor activity // transcription cofactor activity // enzyme binding // protein binding
transcription factor complex // nucleus
ENSG00000169744 ENSG00000215864
neuroblastoma breakpoint family, member 7 [Source:HGNC Symbol;Acc:31989]
NBPF7
2431066
ENSE00001545928|ENSE00001696629|ENSE00001673313|ENSE00001763793
2431098|2431095
unprocessed_pseudogene
chr1
-
120378248-120385157
ENSG00000215864 ENSG00000215866
RP11-426L16.8
2428478
ENSE00001611185
2428481
processed_transcript
chr1
-
113364032-113391666
ENSG00000215866 ENSG00000215867
RP4-773A18.2
2428016
ENSE00001604331
2428040|2428039|2428034|2428033
processed_pseudogene
chr1
-
112190894-112192133
ENSG00000215867 ENSG00000215860
PDZ domain containing 1 pseudogene 1 [Source:HGNC Symbol;Acc:31974]
PDZK1P1
2432794
ENSE00001642059|ENSE00001674385|ENSE00001724675|ENSE00001738870|ENSE00001753951|ENSE00001755481|ENSE00001755481|ENSE00001783257|ENSE00001947532
2432813|2432811|2432803|2432804|2432805|2432806|2432808|2432809
transcribed_unprocessed_pseudogene
chr1
-
145924998-145940767
ENSG00000215860 ENSG00000215863
RP11-495P10.2
2433605
ENSE00001673211|ENSE00001767950|ENSE00001784289
2433672|2433623|2433620|2433614
hsa-let-7a(TargetScan|miRanda), hsa-let-7b(TargetScan|miRanda), hsa-let-7c(TargetScan|miRanda), hsa-let-7e(TargetScan|miRanda), hsa-let-7f(TargetScan|miRanda), hsa-let-7g(TargetScan|miRanda), hsa-let-7i(TargetScan|miRanda), hsa-miR-124a(TargetScan|miRanda), hsa-miR-132(TargetScan|miRanda), hsa-miR-134(TargetScan|miRanda), hsa-miR-138(TargetScan|miRanda), hsa-miR-141(TargetScan|miRanda), hsa-miR-145(TargetScan|miRanda), hsa-miR-149(TargetScan|miRanda), hsa-miR-150(TargetScan|miRanda), hsa-miR-181b(TargetScan|miRanda), hsa-miR-181d(TargetScan|miRanda), hsa-miR-182(TargetScan|miRanda), hsa-miR-192(TargetScan|miRanda), hsa-miR-198(TargetScan|miRanda), hsa-miR-199a(TargetScan|miRanda), hsa-miR-19a(TargetScan|miRanda), hsa-miR-19b(TargetScan|miRanda), hsa-miR-200a(TargetScan|miRanda), hsa-miR-218(TargetScan|miRanda), hsa-miR-299-3p(TargetScan|miRanda), hsa-miR-30b(TargetScan|miRanda), hsa-miR-320(TargetScan|miRanda), hsa-miR-330(TargetScan|miRanda), hsa-miR-335(TargetScan|miRanda), hsa-miR-340(TargetScan|miRanda), hsa-miR-346(TargetScan|miRanda), hsa-miR-378(TargetScan|miRanda), hsa-miR-433(TargetScan|miRanda), hsa-miR-485-5p(TargetScan|miRanda), hsa-miR-492(TargetScan|miRanda), hsa-miR-501(TargetScan|miRanda), hsa-miR-505(TargetScan|miRanda), hsa-miR-506(TargetScan|miRanda), hsa-miR-512-3p(TargetScan|miRanda), hsa-miR-551b(mirbase), hsa-miR-552(TargetScan|miRanda), hsa-miR-567(TargetScan|miRanda), hsa-miR-570(TargetScan|miRanda), hsa-miR-573(TargetScan|miRanda), hsa-miR-587(TargetScan|miRanda), hsa-miR-590(TargetScan|miRanda), hsa-miR-593(TargetScan|miRanda), hsa-miR-609(TargetScan|miRanda), hsa-miR-622(TargetScan|miRanda), hsa-miR-632(TargetScan|miRanda), hsa-miR-644(TargetScan|miRanda), hsa-miR-650(TargetScan|miRanda), hsa-miR-662(TargetScan|miRanda), hsa-miR-768-5p(TargetScan|miRanda), hsa-miR-98(TargetScan|miRanda)
processed_transcript
chr1
-
147841467-147930842
ENSG00000215863 ENSG00000168298
histone cluster 1, H1e [Source:HGNC Symbol;Acc:4718]
HIST1H1E
2899171
ENSE00001173828
2899172|2899173|2899174|2899175
hsa-miR-143(mirbase), hsa-miR-146a*(mirbase), hsa-miR-147(RNAhybrid|miRanda), hsa-miR-199a-3p(mirbase), hsa-miR-302b*(mirbase), hsa-miR-302c*(mirbase), hsa-miR-302d*(mirbase), hsa-miR-330-3p(mirbase), hsa-miR-34b(RNAhybrid|miRanda), hsa-miR-363*(RNAhybrid|miRanda), hsa-miR-409-5p(mirbase), hsa-miR-422a(RNAhybrid|miRanda), hsa-miR-422b(RNAhybrid|miRanda), hsa-miR-454(mirbase), hsa-miR-483-3p(mirbase), hsa-miR-518c*(RNAhybrid|miRanda|mirbase), hsa-miR-520d(RNAhybrid|miRanda), hsa-miR-565(RNAhybrid|miRanda), hsa-miR-571(RNAhybrid|miRanda|mirbase), hsa-miR-575(RNAhybrid|miRanda), hsa-miR-612(RNAhybrid|miRanda), hsa-miR-615(RNAhybrid|miRanda), hsa-miR-623(RNAhybrid|miRanda), hsa-miR-634(mirbase), hsa-miR-637(RNAhybrid|miRanda), hsa-miR-644(RNAhybrid|miRanda), hsa-miR-646(RNAhybrid), hsa-miR-652(mirbase), hsa-miR-659(RNAhybrid|miRanda), hsa-miR-661(RNAhybrid|miRanda), hsa-miR-769-5p(RNAhybrid|miRanda), hsa-miR-876-3p(mirbase), hsa-miR-890(mirbase), hsa-miR-924(mirbase)
nucleus
protein_coding
chr6
+
26156569-26157308
nucleosome positioning // nucleosome assembly
protein binding // DNA binding
nucleus // nucleosome // chromosome
ENSG00000168298 ENSG00000168297
PX domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:23326]
PXK
2626167
ENSE00001930347|ENSE00002340522|ENSE00002350997|ENSE00002229624|ENSE00002384908|ENSE00002385633|ENSE00002379595|ENSE00002406900|ENSE00002415256
2626205|2626206|2626207
hsa-let-7c*(mirbase), hsa-let-7e(RNAhybrid|miRanda), hsa-let-7i(mirbase), hsa-miR-106a(RNAhybrid|miRanda), hsa-miR-106b(miRanda), hsa-miR-125a-5p(mirbase), hsa-miR-125b(mirbase), hsa-miR-129-5p(miRanda), hsa-miR-1297(miRanda), hsa-miR-134(RNAhybrid|miRanda), hsa-miR-138(miRanda), hsa-miR-143(miRanda), hsa-miR-146a(mirbase), hsa-miR-146b-5p(mirbase), hsa-miR-149(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-15b(miRanda), hsa-miR-16(miRanda), hsa-miR-17(miRanda), hsa-miR-17-5p(RNAhybrid|miRanda), hsa-miR-186(RNAhybrid|miRanda|mirbase), hsa-miR-187*(mirbase), hsa-miR-191*(RNAhybrid|miRanda), hsa-miR-193a(RNAhybrid|miRanda), hsa-miR-193b(RNAhybrid|miRanda), hsa-miR-194(miRanda), hsa-miR-195(miRanda), hsa-miR-203(miRanda), hsa-miR-20a(RNAhybrid|miRanda), hsa-miR-20b(miRanda), hsa-miR-218(miRanda), hsa-miR-219-2-3p(mirbase), hsa-miR-22(RNAhybrid|miRanda), hsa-miR-224(miRanda), hsa-miR-24(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-24-3p(TargetScan), hsa-miR-24ab(TargetScan), hsa-miR-26a(miRanda), hsa-miR-26b(miRanda), hsa-miR-29c*(mirbase), hsa-miR-302a(miRanda), hsa-miR-302b(miRanda), hsa-miR-302c(miRanda), hsa-miR-302d(miRanda), hsa-miR-302e(miRanda), hsa-miR-30a(miRanda|mirbase), hsa-miR-30abcdef(TargetScan), hsa-miR-30abe-5p(TargetScan), hsa-miR-30b(miRanda|mirbase), hsa-miR-30c(miRanda|mirbase), hsa-miR-30d(miRanda|mirbase), hsa-miR-30e(miRanda|mirbase), hsa-miR-320(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-320a(miRanda), hsa-miR-320b(miRanda), hsa-miR-320c(miRanda), hsa-miR-320d(miRanda), hsa-miR-337-5p(mirbase), hsa-miR-338(RNAhybrid|miRanda), hsa-miR-33a(miRanda), hsa-miR-33b(miRanda), hsa-miR-34a(RNAhybrid|miRanda), hsa-miR-371(RNAhybrid|miRanda), hsa-miR-371-5p(miRanda), hsa-miR-372(RNAhybrid|miRanda), hsa-miR-377(miRanda), hsa-miR-384-5p(TargetScan), hsa-miR-424(miRanda), hsa-miR-433(miRanda), hsa-miR-449a(miRanda), hsa-miR-449b(miRanda), hsa-miR-450b-5p(mirbase), hsa-miR-452(mirbase), hsa-miR-452*(mirbase), hsa-miR-484(RNAhybrid|miRanda), hsa-miR-486(RNAhybrid|miRanda), hsa-miR-486-5p(mirbase), hsa-miR-488(mirbase), hsa-miR-490-3p(mirbase), hsa-miR-496(RNAhybrid|TargetScan), hsa-miR-497(miRanda), hsa-miR-497*(mirbase), hsa-miR-510(RNAhybrid|miRanda), hsa-miR-512-3p(RNAhybrid|miRanda), hsa-miR-512-5p(RNAhybrid|miRanda), hsa-miR-513(RNAhybrid|miRanda), hsa-miR-515-5p(mirbase), hsa-miR-516a-5p(mirbase), hsa-miR-518a-5p(mirbase), hsa-miR-518c(mirbase), hsa-miR-518e(RNAhybrid|miRanda|mirbase), hsa-miR-518f(mirbase), hsa-miR-519e*(RNAhybrid|miRanda|mirbase), hsa-miR-539(miRanda), hsa-miR-541*(mirbase), hsa-miR-544(miRanda), hsa-miR-550*(mirbase), hsa-miR-558(mirbase), hsa-miR-565(RNAhybrid|miRanda|mirbase), hsa-miR-590-5p(miRanda), hsa-miR-605(mirbase), hsa-miR-608(RNAhybrid|miRanda|mirbase), hsa-miR-621(RNAhybrid|miRanda), hsa-miR-623(RNAhybrid), hsa-miR-627(mirbase), hsa-miR-637(RNAhybrid), hsa-miR-639(RNAhybrid|miRanda), hsa-miR-642(RNAhybrid|miRanda), hsa-miR-644(RNAhybrid|miRanda), hsa-miR-647(RNAhybrid|miRanda), hsa-miR-658(RNAhybrid|miRanda), hsa-miR-659(RNAhybrid), hsa-miR-767-3p(RNAhybrid|miRanda), hsa-miR-768-5p(miRanda), hsa-miR-769-5p(mirbase), hsa-miR-770-5p(mirbase), hsa-miR-873(miRanda), hsa-miR-892b(mirbase), hsa-miR-92a-2*(mirbase), hsa-miR-93(RNAhybrid|miRanda), hsa-miR-944(mirbase)
nucleus
kinase|protein_coding
chr3
+
58318618-58411834
protein phosphorylation // inflammatory response // negative regulation of ion transport // negative regulation of ATPase activity // regulation of synaptic transmission // cell communication
nucleotide binding // protein C-terminus binding // actin binding // phosphatidylinositol binding // protein binding // protein kinase activity // transferase activity, transferring phosphorus-containing groups // ATP binding
cytoplasm // centrosome // nucleus // plasma membrane
ENSG00000168297 ENSG00000168291
pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808]
PDHB
2678367
ENSE00001850504|ENSE00001869391|ENSE00002342443|ENSE00002365633|ENSE00001850504|ENSE00001953362|ENSE00002324977|ENSE00002389622|M19123-3|ENSE00001953362|ENSE00002426264|ENSE00002426762|M19123-2
2678382|2678381|2678380
hsa-let-7a(RNAhybrid|miRanda), hsa-let-7b(miRanda), hsa-let-7b*(mirbase), hsa-let-7c(miRanda), hsa-let-7d(miRanda), hsa-let-7e(RNAhybrid|miRanda), hsa-let-7f(miRanda), hsa-let-7f-1*(mirbase), hsa-let-7g(miRanda), hsa-let-7g*(mirbase), hsa-let-7i(miRanda), hsa-miR-101(miRanda), hsa-miR-101*(mirbase), hsa-miR-10a(RNAhybrid|miRanda|mirbase), hsa-miR-10b(RNAhybrid|miRanda|mirbase), hsa-miR-125a-5p(miRanda), hsa-miR-125b(miRanda), hsa-miR-1297(miRanda), hsa-miR-130a(RNAhybrid), hsa-miR-130b(RNAhybrid|miRanda), hsa-miR-132(miRanda), hsa-miR-137(miRanda), hsa-miR-139-5p(miRanda), hsa-miR-143*(mirbase), hsa-miR-144(miRanda), hsa-miR-147b(mirbase), hsa-miR-148b(miRanda), hsa-miR-153(miRanda), hsa-miR-154(mirbase), hsa-miR-17-3p(RNAhybrid|miRanda), hsa-miR-181a(RNAhybrid|mirbase), hsa-miR-181b(RNAhybrid|miRanda|mirbase), hsa-miR-181c(RNAhybrid), hsa-miR-181d(RNAhybrid|miRanda|mirbase), hsa-miR-182(RNAhybrid|miRanda|mirbase), hsa-miR-183(RNAhybrid|miRanda), hsa-miR-186(miRanda), hsa-miR-18a(RNAhybrid|miRanda), hsa-miR-18b(RNAhybrid|miRanda), hsa-miR-192(miRanda), hsa-miR-194(TargetScan|miRanda|mirbase|pictar), hsa-miR-19a(RNAhybrid|miRanda|mirbase), hsa-miR-19b(RNAhybrid|miRanda|mirbase), hsa-miR-19b-1*(mirbase), hsa-miR-202(miRanda), hsa-miR-205(miRanda), hsa-miR-208b(mirbase), hsa-miR-212(miRanda), hsa-miR-215(miRanda), hsa-miR-218(miRanda), hsa-miR-220(RNAhybrid), hsa-miR-221(RNAhybrid|miRanda|mirbase), hsa-miR-222(RNAhybrid|mirbase), hsa-miR-223(miRanda), hsa-miR-25(miRanda), hsa-miR-26a(miRanda|mirbase), hsa-miR-26b(miRanda|mirbase), hsa-miR-301(RNAhybrid|miRanda), hsa-miR-301a(miRanda), hsa-miR-301b(miRanda), hsa-miR-30a-3p(RNAhybrid|miRanda), hsa-miR-32(miRanda), hsa-miR-330(RNAhybrid|miRanda), hsa-miR-330-3p(mirbase), hsa-miR-337-5p(mirbase), hsa-miR-339(RNAhybrid|miRanda), hsa-miR-346(RNAhybrid|miRanda), hsa-miR-34a(RNAhybrid|miRanda), hsa-miR-34b(RNAhybrid|miRanda), hsa-miR-34c(RNAhybrid|miRanda), hsa-miR-361-5p(mirbase), hsa-miR-363(miRanda), hsa-miR-367(miRanda), hsa-miR-367*(mirbase), hsa-miR-370(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-371-3p(mirbase), hsa-miR-374a(miRanda), hsa-miR-374a*(mirbase), hsa-miR-374b(miRanda), hsa-miR-380(mirbase), hsa-miR-382(miRanda|mirbase), hsa-miR-410(miRanda), hsa-miR-431(RNAhybrid|TargetScan|miRanda|mirbase), hsa-miR-432(RNAhybrid), hsa-miR-448(miRanda), hsa-miR-449(RNAhybrid|miRanda), hsa-miR-449b(RNAhybrid), hsa-miR-451(mirbase), hsa-miR-454(mirbase), hsa-miR-454-5p(RNAhybrid), hsa-miR-485-3p(RNAhybrid|miRanda), hsa-miR-486(RNAhybrid|TargetScan|miRanda), hsa-miR-486-5p(miRanda|mirbase), hsa-miR-491(RNAhybrid|miRanda), hsa-miR-491-5p(mirbase), hsa-miR-492(RNAhybrid|miRanda), hsa-miR-493*(mirbase), hsa-miR-495(RNAhybrid|miRanda|mirbase), hsa-miR-496(mirbase), hsa-miR-501(RNAhybrid|miRanda), hsa-miR-501-5p(mirbase), hsa-miR-502(RNAhybrid|miRanda), hsa-miR-513-3p(mirbase), hsa-miR-524*(RNAhybrid|miRanda), hsa-miR-526c(RNAhybrid|miRanda), hsa-miR-542-3p(mirbase), hsa-miR-545*(mirbase), hsa-miR-548b(RNAhybrid|miRanda), hsa-miR-573(mirbase), hsa-miR-587(mirbase), hsa-miR-589*(mirbase), hsa-miR-590-3p(miRanda|mirbase), hsa-miR-601(RNAhybrid|miRanda), hsa-miR-605(RNAhybrid|miRanda|mirbase), hsa-miR-607(RNAhybrid|miRanda|mirbase), hsa-miR-608(RNAhybrid|miRanda), hsa-miR-611(RNAhybrid|miRanda), hsa-miR-617(RNAhybrid|miRanda|mirbase), hsa-miR-624(RNAhybrid|miRanda), hsa-miR-649(RNAhybrid|miRanda), hsa-miR-650(RNAhybrid|miRanda), hsa-miR-658(RNAhybrid|miRanda), hsa-miR-671(RNAhybrid|miRanda), hsa-miR-765(RNAhybrid|TargetScan|miRanda), hsa-miR-767-3p(RNAhybrid|miRanda), hsa-miR-768-5p(miRanda), hsa-miR-770-5p(RNAhybrid|miRanda), hsa-miR-871(mirbase), hsa-miR-875-5p(miRanda), hsa-miR-92a(miRanda), hsa-miR-92b(miRanda), hsa-miR-95(RNAhybrid|miRanda|mirbase), hsa-miR-98(miRanda)
protein_coding
chr3
-
58413210-58479430
acetyl-CoA biosynthetic process from pyruvate // tricarboxylic acid cycle // small molecule metabolic process // metabolic process // regulation of acetyl-CoA biosynthetic process from pyruvate // pyruvate metabolic process // glycolysis
pyruvate dehydrogenase (acetyl-transferring) activity // catalytic activity // oxidoreductase activity
pyruvate dehydrogenase complex // mitochondrion // mitochondrial matrix
TCA Cycle:WP78 // Glycolysis and Gluconeogenesis:WP534
ENSG00000168291 ENSG00000254140
RP11-731F5.1
3581637
ENSE00001886526
3581680|3581679
hsa-miR-125a-5p(mirbase), hsa-miR-125b(mirbase), hsa-miR-134(mirbase), hsa-miR-135a*(mirbase), hsa-miR-150*(mirbase), hsa-miR-193a-3p(mirbase), hsa-miR-193b(mirbase), hsa-miR-204(mirbase), hsa-miR-25*(mirbase), hsa-miR-320(mirbase), hsa-miR-337-5p(mirbase), hsa-miR-34a(mirbase), hsa-miR-455-5p(mirbase), hsa-miR-500*(mirbase), hsa-miR-502-3p(mirbase), hsa-miR-566(mirbase), hsa-miR-574-5p(mirbase), hsa-miR-604(mirbase), hsa-miR-611(mirbase), hsa-miR-619(mirbase), hsa-miR-621(mirbase), hsa-miR-632(mirbase), hsa-miR-652(mirbase), hsa-miR-768-5p(mirbase), hsa-miR-92b*(mirbase)
lincRNA
chr14
-
106071402-106071658
ENSG00000254140 ENSG00000254141
RP11-642D21.1
3110925
ENSE00002110547|ENSE00002116487
3110927|3110928
sense_intronic
chr8
+
106682239-106691009
ENSG00000254141 ENSG00000225108
AC013268.2
2570100
ENSE00001698274
2570105|2570104|2570101
processed_pseudogene
chr2
-
110744738-110752447
ENSG00000225108 ENSG00000225100
RP11-479O17.7
7385511
ENSE00001639647
3297347
processed_pseudogene
chr10
-
81742741-81742766
ENSG00000225100 ENSG00000225101
olfactory receptor, family 52, subfamily K, member 3 pseudogene [Source:HGNC Symbol;Acc:15224]
OR52K3P
3318123
ENSE00001620723|ENSE00002157317
3318127|3318128|3318130
unitary_pseudogene
chr11
+
4490411-4497497
ENSG00000225101
42187 65264 Kbytes .Supplementary file Size Download File type/resource GPL16329_HuEx-1_0-st-v2.r2.clf.gz
29.7 Mb
(ftp) (http) CLF
GPL16329_HuEx-1_0-st-v2.r2.pgf.gz
95.4 Mb
(ftp) (http) PGF
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