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Platform GPL16756

Query DataSets for GPL16756

Status

Public on Aug 15, 2013

Title

Agilent-030593 Tribolium castaneum array

Technology type

in situ oligonucleotide

Distribution

custom-commercial

Organism

Tribolium castaneum

Manufacturer

Agilent Technologies

Manufacture protocol

see manufacturer's web site at http://www.agilent.com/

Description

trib inf. Oct 2010
Arrays of this design have barcodes that begin with 16030593 or 2530593.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
The ID column represents the Agilent Feature Extraction feature number.
Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.

Submission date

Mar 06, 2013

Last update date

Aug 15, 2013

Contact name

Ann Thomas Tate

E-mail(s)

annt@princeton.edu

Organization name

Princeton University

Department

Ecology and Evolutionary Biology

Street address

106A Guyot Hall

City

Princeton

State/province

NJ

ZIP/Postal code

08544

Country

USA

Samples (2)

GSM1093875, GSM1093876

Series (1)

Effect of maternal treatment on gene expression differences in Bacillus thuringiensis infected pooled larvae

Data table header descriptions
ID
GB_ACC
SEQUENCE
ControlType
ProbeName
SystematicName
SPOT_ID

Data table
ID	GB_ACC	SEQUENCE	ControlType	ProbeName	SystematicName	SPOT_ID
1			1	GE_BrightCorner	GE_BrightCorner	--GE_BrightCorner
2			1	DarkCorner	DarkCorner	--DarkCorner
3			1	DarkCorner	DarkCorner	--DarkCorner
4			1	DarkCorner	DarkCorner	--DarkCorner
5			1	DarkCorner	DarkCorner	--DarkCorner
6			1	DarkCorner	DarkCorner	--DarkCorner
7			1	DarkCorner	DarkCorner	--DarkCorner
8			1	DarkCorner	DarkCorner	--DarkCorner
9			1	DarkCorner	DarkCorner	--DarkCorner
10			1	DarkCorner	DarkCorner	--DarkCorner
11			1	DarkCorner	DarkCorner	--DarkCorner
12	TC000141	ACTGGACCAAAGAATGTGATCAACTGGTCGTTTGGATCTTTTACCAAGGGAACTTGGTCG	0	CUST_279_PI425542833	TC000141
13	TC012115	TAAAGTGTTGAATCAACTGGAGGAGTTGTTGAGTGATATGAAGTCGGATGTGTCGAGGTT	0	CUST_23548_PI425542833	TC012115
14	TC005132	GTCCAATTGTAAATAGTTTCAACGTGACTAGAAATAGTCCGTGTTTTTCAGATTCCGATA	0	CUST_9993_PI425542833	TC005132
15	TC030218	TTGAACACTAAAGTAAATTTCACCGCAAGTGGATGTTTCAATCTAGACTGGACGCTTCTC	0	CUST_32226_PI425542833	TC030218
16	TC003185	ATTGCTCATCCAAGGCGGAAAAAGGAAGCAAAGGATTGAAGAAACACTTGAAGCGAGCCA	0	CUST_6177_PI425542833	TC003185
17	TC011568	CATGCTGCGACTCGCGCTTTGAAAAAACATGTTTCAAAGATCCAGAAGTTCACAAGTTAA	0	CUST_22486_PI425542833	TC011568
18	TC000026	AAACAATCCGAAGCTCTACAGAAGACCCTAATGGACACCATTCAGCTAATCCAGTCGTTG	0	CUST_52_PI425542833	TC000026
19	TC030223	CTCAATACCAAACTGCAATTCACTGCGAAGGATTTTTTCAATTTGGACTGGACGTTCTGT	0	CUST_32236_PI425542833	TC030223
20	TC003344	ACCCCTGACGGACAAACAAATTTTTATACGGTATTATTGCATGAGATTGGACATACTTTA	0	CUST_6488_PI425542833	TC003344

Total number of rows: 45220

Table truncated, full table size 4779 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML

Supplementary file	Size	Download	File type/resource
GPL16756_030593_D_GEO_20101007.txt.gz	1.6 Mb	(ftp)(http)	TXT

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