NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL16980 Query DataSets for GPL16980
Status Public on Jun 21, 2013
Title [HT_HG-U133A] Affymetrix HT Human Genome U133A Array [custom CDF: ENTREZ brainarray v. 16]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description alternate CDF for GPL3921
The GeneChip HT Human Genome U133 Array Plate Set enables researchers to perform large-scale studies by analyzing whole-genome expression for up to 96 samples at a time. The set comprises a U133A and U133B plate, measuring expression levels for more than 33,000 well-characterized genes and UniGene clusters.
 
Submission date Apr 08, 2013
Last update date Jun 21, 2013
Contact name Marc Mendillo
Organization name Whitehead Institute for Biomedical Research
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Samples (12) GSM1116641, GSM1116642, GSM1116643, GSM1116644, GSM1116645, GSM1116646 
Series (2)
GSE45851 Tight coordination of protein translation and heat shock factor 1 activation supports the anabolic malignant state [Gene Expression Data]
GSE45853 Tight coordination of protein translation and heat shock factor 1 activation supports the anabolic malignant state
Relations
Alternative to GPL3921

Data table header descriptions
ID Affy ID
ORF ENTREZ ID
Description Gene Description
SPOT_ID SPOT NUMBER

Data table
ID ORF Description SPOT_ID
10_at 10 N-acetyltransferase 2 (arylamine N-acetyltransferase)
100_at 100 adenosine deaminase
1000_at 1000 cadherin 2, type 1, N-cadherin (neuronal)
10000_at 10000 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
10001_at 10001 mediator complex subunit 6
10002_at 10002 nuclear receptor subfamily 2, group E, member 3
10003_at 10003 N-acetylated alpha-linked acidic dipeptidase 2
10004_at 10004 N-acetylated alpha-linked acidic dipeptidase-like 1
100048912_at 100048912 CDKN2B antisense RNA 1 (non-protein coding)
10005_at 10005 acyl-CoA thioesterase 8
10006_at 10006 abl-interactor 1
10007_at 10007 glucosamine-6-phosphate deaminase 1
10009_at 10009 zinc finger and BTB domain containing 33
1001_at 1001 cadherin 3, type 1, P-cadherin (placental)
10010_at 10010 TRAF family member-associated NFKB activator
100126791_at 100126791 eosinophil granule ontogeny transcript (non-protein coding)
100128124_at 100128124 uncharacterized LOC100128124
100128640_at 100128640 ACVR2B antisense RNA 1 (non-protein coding)
100129128_at 100129128 KH homology domain containing 1-like
100129250_at 100129250 uncharacterized LOC100129250

Total number of rows: 12074

Table truncated, full table size 620 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL16980_HGU133A_Hs_ENTREZG.cdf.gz 4.3 Mb (ftp)(http) CDF
GPL16980_HGU133A_Hs_ENTREZG_mapping.txt.gz 1.3 Mb (ftp)(http) TXT
GPL16980_HGU133A_Hs_ENTREZG_probe_tab.txt.gz 2.3 Mb (ftp)(http) TXT

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap