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Status
Public on Jun 21, 2013
Title
[HT_HG-U133A] Affymetrix HT Human Genome U133A Array [custom CDF: ENTREZ brainarray v. 16]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens
Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's web site
Description
alternate CDF for GPL3921 The GeneChip HT Human Genome U133 Array Plate Set enables researchers to perform large-scale studies by analyzing whole-genome expression for up to 96 samples at a time. The set comprises a U133A and U133B plate, measuring expression levels for more than 33,000 well-characterized genes and UniGene clusters.
Submission date
Apr 08, 2013
Last update date
Jun 21, 2013
Contact name
Marc Mendillo
Organization name
Whitehead Institute for Biomedical Research
Street address
9 Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Samples (12)
GSM1116641 , GSM1116642 , GSM1116643 , GSM1116644 , GSM1116645 , GSM1116646
Series (2)
GSE45851
Tight coordination of protein translation and heat shock factor 1 activation supports the anabolic malignant state [Gene Expression Data]
GSE45853
Tight coordination of protein translation and heat shock factor 1 activation supports the anabolic malignant state
Relations
Alternative to
GPL3921
Data table header descriptions
ID
Affy ID
ORF
ENTREZ ID
Description
Gene Description
SPOT_ID
SPOT NUMBER
Data table
ID
ORF
Description
SPOT_ID
10_at
10
N-acetyltransferase 2 (arylamine N-acetyltransferase)
100_at
100
adenosine deaminase
1000_at
1000
cadherin 2, type 1, N-cadherin (neuronal)
10000_at
10000
v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)
10001_at
10001
mediator complex subunit 6
10002_at
10002
nuclear receptor subfamily 2, group E, member 3
10003_at
10003
N-acetylated alpha-linked acidic dipeptidase 2
10004_at
10004
N-acetylated alpha-linked acidic dipeptidase-like 1
100048912_at
100048912
CDKN2B antisense RNA 1 (non-protein coding)
10005_at
10005
acyl-CoA thioesterase 8
10006_at
10006
abl-interactor 1
10007_at
10007
glucosamine-6-phosphate deaminase 1
10009_at
10009
zinc finger and BTB domain containing 33
1001_at
1001
cadherin 3, type 1, P-cadherin (placental)
10010_at
10010
TRAF family member-associated NFKB activator
100126791_at
100126791
eosinophil granule ontogeny transcript (non-protein coding)
100128124_at
100128124
uncharacterized LOC100128124
100128640_at
100128640
ACVR2B antisense RNA 1 (non-protein coding)
100129128_at
100129128
KH homology domain containing 1-like
100129250_at
100129250
uncharacterized LOC100129250
Total number of rows: 12074 Table truncated, full table size 620 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL16980_HGU133A_Hs_ENTREZG.cdf.gz
4.3 Mb
(ftp) (http)
CDF
GPL16980_HGU133A_Hs_ENTREZG_mapping.txt.gz
1.3 Mb
(ftp) (http)
TXT
GPL16980_HGU133A_Hs_ENTREZG_probe_tab.txt.gz
2.3 Mb
(ftp) (http)
TXT