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Platform GPL17486

Query DataSets for GPL17486

Status

Public on Jul 24, 2013

Title

Affymetrix GeneChip Human Genome U133A 2.0 Array [CDF: HGU133A2_Hs_ENSG_16.0.0]

Technology type

in situ oligonucleotide

Distribution

custom-commercial

Organism

Manufacturer

Affymetrix

Manufacture protocol

Affymetrix standard protocol

Description

This is identical to GPL571 but a custom CDF environment was used to extract data (CDF: HGU133A2_Hs_ENSG_16.0.0).

Submission date

Jul 24, 2013

Last update date

Jun 26, 2014

Contact name

GEO admin

E-mail(s)

geo@ncbi.nlm.nih.gov

Organization name

NCBI/NLM/NIH

Street address

9000 Rockville Pike

City

Bethesda

State/province

MD

ZIP/Postal code

20892

Country

USA

Samples (38)

More...

GSM1194851, GSM1194852, GSM1194853, GSM1194854, GSM1194855, GSM1194856

Series (5)

More...

GSE49009	A Proneural to Mesenchymal Transition Mediated by NFkB Promotes Radiation Resistance in Glioblastoma
GSE49161	A Proneural to Mesenchymal Transition Mediated by NFkB Promotes Radiation Resistance in Glioblastoma (part 1)
GSE49162	A Proneural to Mesenchymal Transition Mediated by NFkB Promotes Radiation Resistance in Glioblastoma (part 2)

Relations

Alternative to

GPL571 (official)

Data table header descriptions
ID
Description
ENSG_ID	gene ID in Ensembl database (www.ensembl.org)
SPOT_ID

Data table
ID	Description	ENSG_ID	SPOT_ID
ENSG00000000003_at	tetraspanin 6 [Source:HGNC Symbol;Acc:11858]	ENSG00000000003	tetraspanin 6 [Source:HGNC Symbol;Acc:11858]
ENSG00000000005_at	tenomodulin [Source:HGNC Symbol;Acc:17757]	ENSG00000000005	tenomodulin [Source:HGNC Symbol;Acc:17757]
ENSG00000000419_at	"dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:HGNC Symbol;Acc:3005]"	ENSG00000000419	"dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:HGNC Symbol;Acc:3005]"
ENSG00000000457_at	SCY1-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:19285]	ENSG00000000457	SCY1-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:19285]
ENSG00000000460_at	chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:25565]	ENSG00000000460	chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:25565]
ENSG00000000938_at	Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog [Source:HGNC Symbol;Acc:3697]	ENSG00000000938	Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog [Source:HGNC Symbol;Acc:3697]
ENSG00000000971_at	complement factor H [Source:HGNC Symbol;Acc:4883]	ENSG00000000971	complement factor H [Source:HGNC Symbol;Acc:4883]
ENSG00000001084_at	"glutamate-cysteine ligase, catalytic subunit [Source:HGNC Symbol;Acc:4311]"	ENSG00000001084	"glutamate-cysteine ligase, catalytic subunit [Source:HGNC Symbol;Acc:4311]"
ENSG00000001167_at	"nuclear transcription factor Y, alpha [Source:HGNC Symbol;Acc:7804]"	ENSG00000001167	"nuclear transcription factor Y, alpha [Source:HGNC Symbol;Acc:7804]"
ENSG00000001461_at	NIPA-like domain containing 3 [Source:HGNC Symbol;Acc:25233]	ENSG00000001461	NIPA-like domain containing 3 [Source:HGNC Symbol;Acc:25233]
ENSG00000001497_at	LAS1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:25726]	ENSG00000001497	LAS1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:25726]
ENSG00000001561_at	ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) [Source:HGNC Symbol;Acc:3359]	ENSG00000001561	ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) [Source:HGNC Symbol;Acc:3359]
ENSG00000001617_at	"sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F [Source:HGNC Symbol;Acc:10728]"	ENSG00000001617	"sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F [Source:HGNC Symbol;Acc:10728]"
ENSG00000001626_at	"cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:HGNC Symbol;Acc:1884]"	ENSG00000001626	"cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:HGNC Symbol;Acc:1884]"
ENSG00000002016_at	RAD52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:9824]	ENSG00000002016	RAD52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:9824]
ENSG00000002330_at	BCL2-associated agonist of cell death [Source:HGNC Symbol;Acc:936]	ENSG00000002330	BCL2-associated agonist of cell death [Source:HGNC Symbol;Acc:936]
ENSG00000002549_at	leucine aminopeptidase 3 [Source:HGNC Symbol;Acc:18449]	ENSG00000002549	leucine aminopeptidase 3 [Source:HGNC Symbol;Acc:18449]
ENSG00000002586_at	CD99 molecule [Source:HGNC Symbol;Acc:7082]	ENSG00000002586	CD99 molecule [Source:HGNC Symbol;Acc:7082]
ENSG00000002587_at	heparan sulfate (glucosamine) 3-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5194]	ENSG00000002587	heparan sulfate (glucosamine) 3-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5194]
ENSG00000002726_at	amiloride binding protein 1 (amine oxidase (copper-containing)) [Source:HGNC Symbol;Acc:80]	ENSG00000002726	amiloride binding protein 1 (amine oxidase (copper-containing)) [Source:HGNC Symbol;Acc:80]

Total number of rows: 11859

Table truncated, full table size 1978 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML

Supplementary file	Size	Download	File type/resource
GPL17486_HGU133A2_Hs_ENSG.cdf.gz	4.4 Mb	(ftp)(http)	CDF
GPL17486_HGU133A2_Hs_ENSG_desc.txt.gz	228.7 Kb	(ftp)(http)	TXT
GPL17486_HGU133A2_Hs_ENSG_mapping.txt.gz	1.4 Mb	(ftp)(http)	TXT
GPL17486_HGU133A2_Hs_ENSG_probe_tab.txt.gz	2.4 Mb	(ftp)(http)	TXT

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