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| Status |
Public on Sep 01, 2014 |
| Title |
MAD_MM_v1_Nimble_e_135 |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
see manufacturer's web site www.nimblegen.com
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| Description |
NimbleGen custom oligonucleotide Mus musculus 12x135K microarray that covers approx. 44,000 genes and contains 2 different 60mers per gene.
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| Submission date |
Sep 17, 2013 |
| Last update date |
Sep 01, 2014 |
| Contact name |
Oskar Bruning |
| Organization name |
University of Amsterdam
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| Department |
SILS
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| Lab |
MicroArray Department
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| Street address |
Science Park 904
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| City |
Amsterdam |
| ZIP/Postal code |
1098 XH |
| Country |
Netherlands |
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| Samples (105)
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GSM1232606, GSM1232607, GSM1232608, GSM1232609, GSM1232610, GSM1232611
GSM1232612, GSM1232613, GSM1232614, GSM1232615, GSM1232616, GSM1232617, GSM1232618, GSM1232619, GSM1232620, GSM1232621, GSM1232622, GSM1232623, GSM1232624, GSM1232625, GSM1232626, GSM1232627, GSM1232628, GSM1232629, GSM1232630, GSM1232631, GSM1232632, GSM1232633, GSM1232634, GSM1232635, GSM1232636, GSM1232637, GSM1232638, GSM1232639, GSM1232640, GSM1232641, GSM1232642, GSM1232643, GSM1232644, GSM1232645, GSM1232646, GSM1232647, GSM1232648, GSM1232649, GSM1232650, GSM1232651, GSM1232652, GSM1232653, GSM1243106, GSM1243107, GSM1243108, GSM1243109, GSM1243110, GSM1243111, GSM1243112, GSM1243113, GSM1243114, GSM1243115, GSM1243116, GSM1243117, GSM1243118, GSM1243119, GSM1243120, GSM1243121, GSM1243122, GSM1243123, GSM1243124, GSM1243125, GSM1243126, GSM1243127, GSM1243128, GSM1243129, GSM1243130, GSM1243131, GSM1243132, GSM1243133, GSM1243134, GSM1243135, GSM1243136, GSM1243137, GSM1243138, GSM1243139, GSM1243140, GSM1243141, GSM1243142, GSM1243143, GSM1243144, GSM1243145, GSM1243146, GSM1243147, GSM1243148, GSM1243149, GSM1243150, GSM1243151, GSM1243152, GSM1243153, GSM1243154, GSM1243155, GSM1243156, GSM1243157, GSM1243158, GSM1243159, GSM1243160, GSM1243161, GSM1243162
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| Series (2) |
| GSE50930 |
UV-C dose and time range finding study on Mouse Embryonic Fibroblasts (MEFs) |
| GSE51348 |
UV-B dose and time range finding study on mouse biopsy skin samples |
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| Data table header descriptions |
| ID |
|
| CHROMOSOME |
Chromosome number |
| START |
Start location |
| STOP |
Stop location |
| GENE_ID |
Entrez ID |
| GENE_NAME |
Name of the gene |
| Description |
Description of the gene |
| SPOT_ID |
GenBank IDs |
| Data table |
| ID |
CHROMOSOME |
START |
STOP |
GENE_ID |
GENE_NAME |
Description |
SPOT_ID |
| NM_001103168 |
chr9 |
20866836 |
20872369 |
100009600 |
Zglp1 |
Mus musculus GATA-like 1 (Glp1), mRNA. |
NM_001103168 |
| NM_001105180 |
chr7 |
92088678 |
92112519 |
100009609 |
Vmn2r65 |
Mus musculus vomeronasal 2, receptor 65 (Vmn2r65), mRNA. |
NM_001105180 |
| AK170868 |
chr11 |
45621584 |
45656382 |
100009664 |
F630206G17Rik |
Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630206G17 product:unclassifiable, full insert sequence. |
AK170868 |
| BC053700 |
chr4 |
143747464 |
143752539 |
100012 |
Oog3 |
Mus musculus oogenesin 3, mRNA (cDNA clone MGC:60746 IMAGE:30049894), complete cds. |
BC053700 |
| AK169675;BC021467 |
chr4;chr4 |
134302718;134301336 |
134306022;134323858 |
100017 |
Ldlrap1;Ldlrap1 |
Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007B04 product:Similar to LDL receptor adaptor protein homolog [Mus musculus], full insert sequence.;Mus musculus low density lipoprotein receptor adaptor protein 1, mRNA (cDNA clone MGC:29272 IMAGE:5067154), complete cds. |
AK169675;BC021467 |
| AK037999;AK142906;AK144722;AY512920;BC071242 |
chr4;chr4;chr4;chr4;chr4 |
32837545;32854038;32744093;32809864;32744093 |
32840590;32856263;32783529;32818455;32751133 |
100019 |
Mdn1;Mdn1;Mdn1;Mdn1;Mdn1 |
Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130070M06 product:hypothetical protein, full insert sequence.;Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930044I10 product:similar to Midasin (MIDAS-containing protein) [Homo sapiens], full insert sequence.;Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730026N24 product:hypothetical AAA ATPase containing protein, full insert sequence.;Mus musculus clone NIA:C0339F02 unknown mRNA.;Mus musculus midasin homolog (yeast), mRNA (cDNA clone IMAGE:30440039), complete cds. |
AK037999;AK142906;AK144722;AY512920;BC071242 |
| AK036671 |
chr1 |
175603810 |
175628523 |
100033459 |
E430029J22Rik |
Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830148G24 product:PAAD/DAPIN/Pyrin domain containing protein, full insert sequence. |
AK036671 |
| BC089618 |
chr11 |
83517584 |
83519771 |
100034251 |
Gm11428 |
Mus musculus predicted gene, OTTMUSG00000000971, mRNA (cDNA clone MGC:107680 IMAGE:6766535), complete cds. |
BC089618 |
| AK038478 |
chr7 |
86855168 |
86857243 |
100034360 |
9330171B17Rik |
Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230018M15 product:hypothetical protein, full insert sequence. |
AK038478 |
| BC005728 |
chr2 |
121287213 |
121299720 |
100034361 |
Mfap1b |
Mus musculus microfibrillar-associated protein 1B, mRNA (cDNA clone MGC:11637 IMAGE:3595848), complete cds. |
BC005728 |
| AK084081 |
chr4 |
106799217 |
106808857 |
100034661 |
LOC100034661 |
Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130084K08 product:unclassifiable, full insert sequence. |
AK084081 |
| BC100530 |
chr16 |
36359467 |
36367834 |
100034684 |
BC100530 |
Mus musculus cDNA sequence BC100530, mRNA (cDNA clone MGC:118399 IMAGE:30289147), complete cds. |
BC100530 |
| NR_003373 |
chr11 |
68715067 |
68718036 |
100034726 |
Gm15772 |
Mus musculus ribosomal protein L26 pseudogene (LOC100034726) on chromosome 5. |
NR_003373 |
| AK045818 |
chr2 |
17949184 |
17952204 |
100034739 |
LOC100034739 |
Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230312F20 product:unclassifiable, full insert sequence. |
AK045818 |
| AK044505 |
chr17 |
26083336 |
26089510 |
100034748 |
A930017K11Rik |
Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930017K11 product:unclassifiable, full insert sequence. |
AK044505 |
| AK151815 |
chr3 |
7612704 |
7690001 |
100036513 |
LOC100036513 |
Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830038J15 product:unclassifiable, full insert sequence. |
AK151815 |
| AK009885;BC061003 |
chr6;chr6 |
8209296;8220465 |
8378762;8378762 |
100036521 |
Gm16039;Gm16039 |
Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310047L21 product:hypothetical protein, full insert sequence.;Mus musculus glucocorticoid induced transcript 1, mRNA (cDNA clone IMAGE:6535572). |
AK009885;BC061003 |
| AK016549 |
chr7 |
148795964 |
148799646 |
100036523 |
ENSMUSG00000038461 |
Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932434L04 product:hypothetical protein, full insert sequence. |
AK016549 |
| AK046026 |
chr9 |
30761671 |
30838790 |
100036527 |
Gm9957 |
Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230334K19 product:hypothetical protein, full insert sequence. |
AK046026 |
| AK047323 |
chr7 |
100215840 |
100229537 |
100036533 |
Gm9934 |
Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930049H16 product:hypothetical protein, full insert sequence. |
AK047323 |
Total number of rows: 24203
Table truncated, full table size 7165 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL17736_100630_MAD_MM_v1_Nimble_e_135_exp.ndf.gz |
5.6 Mb |
(ftp)(http) |
NDF |
| GPL17736_MAD_MM_v1_Nimble_e_135_exp_annotation.txt.gz |
14.0 Mb |
(ftp)(http) |
TXT |
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