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Platform GPL18283 Query DataSets for GPL18283
Status Public on Feb 12, 2015
Title [HT_HG-U133A] Affymetrix Human Genome U133A Array [CDF from AffyProbeMiner]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see the Affymetrix website
 
Description This identical to GPL3921 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
 
Submission date Feb 12, 2014
Last update date Feb 12, 2015
Contact name Clark C. Chen
E-mail(s) clarkchen@ucsd.edu
Organization name University of California San Diego
Lab Division of Neurosurgery
Street address 3855 Health Science Drive #0987
City La Jolla
State/province CA
ZIP/Postal code 92093-0987
Country USA
 
Samples (10) GSM1327329, GSM1327330, GSM1327331, GSM1327332, GSM1327333, GSM1327334 
Series (1)
GSE54967 Expression data from U87MG subclones
Relations
Alternative to GPL3921 (Alternative CDF [official])

Data table header descriptions
ID
GB_LIST
gene name
ENTREZ_GENE_ID Entrez Gene ID
Affymetrix Probe Set ID List
SPOT_ID Affymetrix Probe Name

Data table
ID GB_LIST gene name ENTREZ_GENE_ID Affymetrix Probe Set ID List SPOT_ID
FAIM NM_018147.2 FAIM 55179 220643_s_at AFFYCUSTOMHFG1
ZNF493 NM_145326.2 ZNF493 284443 211064_at AFFYCUSTOMHFG10
DBN1 NM_080881.2 DBN1 1627 202806_at;217025_s_at AFFYCUSTOMHFG100
IL1RL1 NM_003856.2 IL1RL1 9173 207526_s_at;210442_at AFFYCUSTOMHFG10000
XRCC3 NM_005432.3 XRCC3 7517 216299_s_at AFFYCUSTOMHFG10004
PCDH11Y NM_032972.1 PCDH11Y 83259 211227_s_at;217049_x_at AFFYCUSTOMHFG10006
SPAG1 NM_172218.1 SPAG1 6674 210117_at AFFYCUSTOMHFG10008
NRXN3 NM_138970.3 NRXN3 9369 205795_at;215021_s_at AFFYCUSTOMHFG10009
CENPM NM_024053.3 CENPM 79019 218741_at AFFYCUSTOMHFG10012
CSGALNACT1 NR_024040.1 CSGALNACT1 55790 219049_at AFFYCUSTOMHFG10014
EVPL NM_001988.2 EVPL 2125 204503_at AFFYCUSTOMHFG10015
JDP2 NM_130469.3 JDP2 122953 206428_s_at AFFYCUSTOMHFG10016
TM7SF2 NM_003273.2 TM7SF2 7108 210130_s_at AFFYCUSTOMHFG10017
PBX1 NM_002585.2 PBX1 5087 205253_at;212148_at;212151_at AFFYCUSTOMHFG10018
SIRT4 NM_012240.1 SIRT4 23409 220047_at;222248_s_at AFFYCUSTOMHFG10019
FYN NM_153048.1 FYN 2534 210105_s_at;216033_s_at AFFYCUSTOMHFG1002
MGAT1 NM_002406.3 MGAT1 4245 201126_s_at AFFYCUSTOMHFG10020
ANXA6 NM_004033.2 ANXA6 309 200982_s_at AFFYCUSTOMHFG10021
WHSC1L1 NM_023034.1 WHSC1L1 54904 218173_s_at;221248_s_at AFFYCUSTOMHFG10022
ZNF711 NM_021998.4 ZNF711 7552 207781_s_at AFFYCUSTOMHFG10023

Total number of rows: 11883

Table truncated, full table size 763 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL18283_Custom_CDF_annotation.xls.gz 520.9 Kb (ftp)(http) XLS
GPL18283_HT_HG-U133A.cdf.gz 5.3 Mb (ftp)(http) CDF
GPL18283_HT_HG-U133A.cdf.txt.gz 2.0 Mb (ftp)(http) TXT

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