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GEO accession:
Platform GPL18283
Query DataSets for GPL18283
Status
Public on Feb 12, 2015
Title
[HT_HG-U133A] Affymetrix Human Genome U133A Array [CDF from AffyProbeMiner]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens
Manufacturer
Affymetrix
Manufacture protocol
see the Affymetrix website
Description
This identical to GPL3921 but a custom cdf environmnet was used to extract data. The cdf can be found at the link below.
Submission date
Feb 12, 2014
Last update date
Feb 12, 2015
Contact name
Clark C. Chen
E-mail(s)
clarkchen@ucsd.edu
Organization name
University of California San Diego
Lab
Division of Neurosurgery
Street address
3855 Health Science Drive #0987
City
La Jolla
State/province
CA
ZIP/Postal code
92093-0987
Country
USA
Samples (10)
Less...
More...
GSM1327329
,
GSM1327330
,
GSM1327331
,
GSM1327332
,
GSM1327333
,
GSM1327334
GSM1327335
,
GSM1327336
,
GSM1327337
,
GSM1327338
Series (1)
GSE54967
Expression data from U87MG subclones
Relations
Alternative to
GPL3921
(Alternative CDF [official])
Data table header descriptions
ID
GB_LIST
gene name
ENTREZ_GENE_ID
Entrez Gene ID
Affymetrix Probe Set ID List
SPOT_ID
Affymetrix Probe Name
Data table
ID
GB_LIST
gene name
ENTREZ_GENE_ID
Affymetrix Probe Set ID List
SPOT_ID
FAIM
NM_018147.2
FAIM
55179
220643_s_at
AFFYCUSTOMHFG1
ZNF493
NM_145326.2
ZNF493
284443
211064_at
AFFYCUSTOMHFG10
DBN1
NM_080881.2
DBN1
1627
202806_at;217025_s_at
AFFYCUSTOMHFG100
IL1RL1
NM_003856.2
IL1RL1
9173
207526_s_at;210442_at
AFFYCUSTOMHFG10000
XRCC3
NM_005432.3
XRCC3
7517
216299_s_at
AFFYCUSTOMHFG10004
PCDH11Y
NM_032972.1
PCDH11Y
83259
211227_s_at;217049_x_at
AFFYCUSTOMHFG10006
SPAG1
NM_172218.1
SPAG1
6674
210117_at
AFFYCUSTOMHFG10008
NRXN3
NM_138970.3
NRXN3
9369
205795_at;215021_s_at
AFFYCUSTOMHFG10009
CENPM
NM_024053.3
CENPM
79019
218741_at
AFFYCUSTOMHFG10012
CSGALNACT1
NR_024040.1
CSGALNACT1
55790
219049_at
AFFYCUSTOMHFG10014
EVPL
NM_001988.2
EVPL
2125
204503_at
AFFYCUSTOMHFG10015
JDP2
NM_130469.3
JDP2
122953
206428_s_at
AFFYCUSTOMHFG10016
TM7SF2
NM_003273.2
TM7SF2
7108
210130_s_at
AFFYCUSTOMHFG10017
PBX1
NM_002585.2
PBX1
5087
205253_at;212148_at;212151_at
AFFYCUSTOMHFG10018
SIRT4
NM_012240.1
SIRT4
23409
220047_at;222248_s_at
AFFYCUSTOMHFG10019
FYN
NM_153048.1
FYN
2534
210105_s_at;216033_s_at
AFFYCUSTOMHFG1002
MGAT1
NM_002406.3
MGAT1
4245
201126_s_at
AFFYCUSTOMHFG10020
ANXA6
NM_004033.2
ANXA6
309
200982_s_at
AFFYCUSTOMHFG10021
WHSC1L1
NM_023034.1
WHSC1L1
54904
218173_s_at;221248_s_at
AFFYCUSTOMHFG10022
ZNF711
NM_021998.4
ZNF711
7552
207781_s_at
AFFYCUSTOMHFG10023
Total number of rows:
11883
Table truncated, full table size
763 Kbytes
.
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Supplementary file
Size
Download
File type/resource
GPL18283_Custom_CDF_annotation.xls.gz
520.9 Kb
(ftp)
(http)
XLS
GPL18283_HT_HG-U133A.cdf.gz
5.3 Mb
(ftp)
(http)
CDF
GPL18283_HT_HG-U133A.cdf.txt.gz
2.0 Mb
(ftp)
(http)
TXT
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