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Status
Public on Apr 28, 2014
Title
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array [CDF: Mouse4302_Mm_ENTREZG.cdf Brainarray version 17.0.0]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus
Manufacturer
Affymetrix
Manufacture protocol
This is identical to GPL1261 but a custom cdf environment was used to extract data. The cdf can be found at the link below.
Description
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/17.0.0/entrezg.asp
Submission date
Apr 28, 2014
Last update date
Apr 28, 2014
Contact name
GEO
Country
USA
Samples (198)
GSM1375663 , GSM1375664 , GSM1375665 , GSM1375666 , GSM1375667 , GSM1375668
GSM1375669 ,
GSM1375670 ,
GSM1375671 ,
GSM1375672 ,
GSM1375673 ,
GSM1375674 ,
GSM1375675 ,
GSM1375676 ,
GSM1375677 ,
GSM1375678 ,
GSM1375679 ,
GSM1375680 ,
GSM1375681 ,
GSM1375682 ,
GSM1375683 ,
GSM1375684 ,
GSM1375685 ,
GSM1375686 ,
GSM1375687 ,
GSM1375688 ,
GSM1375689 ,
GSM1375690 ,
GSM1375691 ,
GSM1375692 ,
GSM1375693 ,
GSM1375694 ,
GSM1375695 ,
GSM1375696 ,
GSM1375697 ,
GSM1375698 ,
GSM1375699 ,
GSM1375700 ,
GSM1375701 ,
GSM1375702 ,
GSM1375703 ,
GSM1375704 ,
GSM1375705 ,
GSM1375706 ,
GSM1375707 ,
GSM1375708 ,
GSM1375709 ,
GSM1375710 ,
GSM1375711 ,
GSM1375712 ,
GSM1375713 ,
GSM1375714 ,
GSM1375715 ,
GSM1375716 ,
GSM1375717 ,
GSM1375718 ,
GSM1375719 ,
GSM1375720 ,
GSM1375721 ,
GSM1375722 ,
GSM1480250 ,
GSM1480251 ,
GSM1480252 ,
GSM1480253 ,
GSM1480254 ,
GSM1480255 ,
GSM1480256 ,
GSM1480257 ,
GSM1480258 ,
GSM1480259 ,
GSM1480260 ,
GSM1854287 ,
GSM1854288 ,
GSM1854289 ,
GSM1854290 ,
GSM1854291 ,
GSM1854292 ,
GSM1854293 ,
GSM1854294 ,
GSM1854295 ,
GSM1854296 ,
GSM1854297 ,
GSM1854298 ,
GSM1854299 ,
GSM1854300 ,
GSM1854301 ,
GSM1854302 ,
GSM1854303 ,
GSM1854304 ,
GSM1854305 ,
GSM1854306 ,
GSM1854307 ,
GSM1854308 ,
GSM1854309 ,
GSM1854310 ,
GSM1854311 ,
GSM1854312 ,
GSM1854313 ,
GSM1854314 ,
GSM1854315 ,
GSM1854316 ,
GSM1854317 ,
GSM1854318 ,
GSM1854319 ,
GSM1854320 ,
GSM1854321 ,
GSM1854322 ,
GSM1854323 ,
GSM1854324 ,
GSM1854325 ,
GSM1854326 ,
GSM1854327 ,
GSM1854328 ,
GSM1854329 ,
GSM1854330 ,
GSM1854331 ,
GSM1854332 ,
GSM1854333 ,
GSM1854334 ,
GSM1854335 ,
GSM1854336 ,
GSM1854337 ,
GSM1854338 ,
GSM1854339 ,
GSM1854340 ,
GSM1854341 ,
GSM1854342 ,
GSM1854343 ,
GSM1854344 ,
GSM1854345 ,
GSM1854346 ,
GSM1854347 ,
GSM1854348 ,
GSM1854349 ,
GSM1854350 ,
GSM1854351 ,
GSM1854352 ,
GSM1854353 ,
GSM1854354 ,
GSM1854355 ,
GSM1854356 ,
GSM1854357 ,
GSM1854358 ,
GSM1854359 ,
GSM1854360 ,
GSM1854361 ,
GSM1854362 ,
GSM1854363 ,
GSM1854364 ,
GSM1854365 ,
GSM1854366 ,
GSM1854367 ,
GSM1854368 ,
GSM1854369 ,
GSM1854370 ,
GSM1854371 ,
GSM1854372 ,
GSM1854373 ,
GSM1854374 ,
GSM1854375 ,
GSM1854376 ,
GSM1854377 ,
GSM1854378 ,
GSM1854379 ,
GSM1854380 ,
GSM1854381 ,
GSM1854382 ,
GSM1854383 ,
GSM1854384 ,
GSM1854385 ,
GSM1854386 ,
GSM1854387 ,
GSM1854388 ,
GSM1854389 ,
GSM1854390 ,
GSM1854391 ,
GSM1854392 ,
GSM1854393 ,
GSM1854394 ,
GSM1854395 ,
GSM1854396 ,
GSM1854397 ,
GSM1854398 ,
GSM1854399 ,
GSM1854400 ,
GSM1854401 ,
GSM1854402 ,
GSM1854403 ,
GSM1854404 ,
GSM1854405 ,
GSM1854406 ,
GSM1854407 ,
GSM1854408 ,
GSM1854409 ,
GSM1854410 ,
GSM1854411 ,
GSM1854412 ,
GSM1854413
Series (5)
GSE57129
Evaluating microRNA profiles reveals discriminative responses following genotoxic or non-genotoxic carcinogen exposure in primary mouse hepatocytes [Affymetrix]
GSE57132
Evaluating mRNA and microRNA profiles reveals discriminative and compound-specific responses following genotoxic or non-genotoxic carcinogen exposure in primary mouse hepatocytes
GSE60447
Stretch-dependent genes in vascular smooth muscle cells
GSE72081
Exploiting microRNA and mRNA profiles generated in vitro from carcinogen-exposed primary mouse hepatocytes for predicting in vivo genotoxicity and carcinogenicity (mRNA)
GSE72088
Exploiting microRNA and mRNA profiles generated in vitro from carcinogen-exposed primary mouse hepatocytes for predicting in vivo genotoxicity and carcinogenicity
Relations
Alternative to
GPL1261 (Alternative CDF)
Data table header descriptions
ID
Probe Set Name
ORF
Gene database ID
DESCRIPTION
Gene description
Data table
ID
ORF
DESCRIPTION
100008567_at
100008567
predicted gene 14964
100009600_at
100009600
zinc finger, GATA-like protein 1
100012_at
100012
oogenesin 3
100017_at
100017
low density lipoprotein receptor adaptor protein 1
100019_at
100019
midasin homolog (yeast)
100034251_at
100034251
WAP four-disulfide core domain 17
100034739_at
100034739
predicted gene, 17762
100034748_at
100034748
RIKEN cDNA A930017K11 gene
100036520_at
100036520
predicted gene 14318
100036521_at
100036521
predicted gene 16039
100036523_at
100036523
predicted gene, 16982
100036768_at
100036768
predicted gene 11696
100037258_at
100037258
DnaJ (Hsp40) homolog, subfamily C, member 3
100037262_at
100037262
predicted gene 12359
100037278_at
100037278
family with sequence similarity 129, member C
100038347_at
100038347
family with sequence similarity 174, member B
100038358_at
100038358
predicted gene 10857
100038371_at
100038371
zinc finger protein 389
100038392_at
100038392
predicted gene 10785
100038398_at
100038398
predicted gene 10567
Total number of rows: 17502 Table truncated, full table size 867 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL18615_Mouse4302_Mm_ENTREZG.cdf.gz
6.9 Mb
(ftp) (http)
CDF
GPL18615_Mouse4302_Mm_ENTREZG_desc.annot.txt.gz
85.2 Kb
(ftp) (http)
TXT
GPL18615_Mouse4302_Mm_ENTREZG_desc.txt.gz
212.2 Kb
(ftp) (http)
TXT
GPL18615_Mouse4302_Mm_ENTREZG_mapping.txt.gz
2.2 Mb
(ftp) (http)
TXT
GPL18615_Mouse4302_Mm_ENTREZG_probe_tab.txt.gz
3.6 Mb
(ftp) (http)
TXT