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Platform GPL19362 Query DataSets for GPL19362
Status Public on Jun 30, 2016
Title miRFishes_20_LCB_131125-F
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Acipenser sturio
Manufacturer LC Sciences
Manufacture protocol Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://microrna.sanger.ac.uk/sequences/) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. The detection probes are made by in situ synthesis using PGR (photogenerated reagent) chemistry.
 
 
Submission date Oct 28, 2014
Last update date Jun 30, 2016
Contact name Zhang Xiujuan
E-mail(s) zhangxj67@gdei.gd.cn
Phone 020-89100920
Organization name Guangdong Entomological Institute
Lab Guangdong Public Laboratory of Wild Animal Conservation and Utilization
Street address 105 Xingang West Road, Haizhu District
City Guangzhou City
State/province Guangdong Province
ZIP/Postal code 510260
Country China
 
Samples (2) GSM1533395, GSM1533396
Series (1)
GSE62787 Sex-biased expression of miRNAs by microarray in critically endangered Amur sturgeon

Data table header descriptions
ID
Reporter ID
Sequence target sequence (5' to 3') of the probe
Reporter_Source standard miRNA or customer defined sequence
MB_ACC miRBase accession
miRNA_ID
SPOT_ID

Data table
ID Reporter ID Sequence Reporter_Source MB_ACC miRNA_ID SPOT_ID
ccr-let-7i ccr-let-7i UGAGGUAGUAGUUUGUGCUGU standard MIMAT0026192 ccr-let-7i
ccr-miR-100 ccr-miR-100 AACCCGUAGAUCCGAACUUGU standard MIMAT0026195 ccr-miR-100
ccr-miR-101b ccr-miR-101b GUACAGUACUAUGAUAACUGA standard MIMAT0026197 ccr-miR-101b
ccr-miR-107 ccr-miR-107 AGCAGCAUUGUACAGGGCUAUC standard MIMAT0026199,MIMAT0029389 ccr-miR-107
ccr-miR-10b ccr-miR-10b UACCCUGUAGAACCGAAUUUGU standard MIMAT0026200,MIMAT0029392,MIMAT0022651 ccr-miR-10b
ccr-miR-10c ccr-miR-10c UACCCUGUAGAUCCGGAUUUGUG standard MIMAT0026201 ccr-miR-10c
ccr-miR-10d ccr-miR-10d UACCCUGUAGAACCGAAUGUGU standard MIMAT0026202,MIMAT0029394,MIMAT0022633,MIMAT0025422 ccr-miR-10d
ccr-miR-122 ccr-miR-122 UGGAGUGUGACAAUGGUGUUU standard MIMAT0026203,MIMAT0029395 ccr-miR-122
ccr-miR-124a ccr-miR-124a UCAAGGUCCGCUGUGAACAC standard MIMAT0026331 ccr-miR-124a
ccr-miR-124b ccr-miR-124b UCAAGGUCCGCCGUGAACACGC standard MIMAT0026334 ccr-miR-124b
ccr-miR-126-3p ccr-miR-126-3p CUCGUACCGUGAGUAAUAAUGC standard MIMAT0026207 ccr-miR-126-3p
ccr-miR-128 ccr-miR-128 UCACAGUGAACCGGUCUCUUU standard MIMAT0026208,MIMAT0029402 ccr-miR-128
ccr-miR-129 ccr-miR-129 CUUUUUGCGGUCUGGGCUUGC standard MIMAT0026209,MIMAT0029403 ccr-miR-129
ccr-miR-132b ccr-miR-132b ACCAUGGCUGUAGACUGUUACC standard MIMAT0026330 ccr-miR-132b
ccr-miR-133a-3p ccr-miR-133a-3p UUGGUCCCCUUCAACCAGCUGU standard MIMAT0026215,MIMAT0029407 ccr-miR-133a-3p
ccr-miR-133a-5p ccr-miR-133a-5p AGCUGGUAAAAUGGAACCAAA standard MIMAT0026214 ccr-miR-133a-5p
ccr-miR-135c ccr-miR-135c UAUGGCUUUCUAUUCCUAUGUGA standard MIMAT0026216,MIMAT0029412 ccr-miR-135c
ccr-miR-137 ccr-miR-137 UUAUUGCUUAAGAAUACGCGUAG standard MIMAT0026217,MIMAT0029413 ccr-miR-137
ccr-miR-138 ccr-miR-138 AGCUGGUGUUGUGAAUCAGGC standard MIMAT0026218 ccr-miR-138
ccr-miR-139 ccr-miR-139 UCUACAGUGCAUGUGUCUCCAGU standard MIMAT0026219,MIMAT0029416 ccr-miR-139

Total number of rows: 663

Table truncated, full table size 59 Kbytes.




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