GEO Accession viewer

GSE72659	Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
GSE76930	A Streamlined Tethered Chromosome Conformation Capture Protocol
GSE81706	Germline- and soma-specific heritable epigenetic silencing at an endogenous locus (small RNA-Seq)
GSE81707	Germline- and soma-specific heritable epigenetic silencing at an endogenous locus (RNA-Seq)
GSE81708	Germline- and soma-specific heritable epigenetic silencing at an endogenous locus
GSE86381	Comparative transcriptomics of Steinernema and Caenorhabditis single embryos reveals gene expression divergence during early embryogenesis
GSE91073	RNA-seq of N2 and lin-45(n2018) mutant C.elegans responses to osmotic stress
GSE92840	The RNAi Inheritance Machinery of Caenorhabditis elegans
GSE93665	Differential gene expression between feminized C. elegans male and female germlines
GSE93724	Activation of DAF-16/FOXO by reactive oxygen species promotes longevity in long- lived mitochondrial mutants in C. elegans
GSE94639	WDR-5 prevents global and chromosomal accumulation of methyl marks at H3K4
GSE94703	CLIP libraries for SUP-26::FLAG
GSE94704	A microRNA family exerts maternal control on sex determination in C. elegans
GSE95240	RNA-sequencing of C.elegans isp-1 mutant and superoxide dismutase-isp-1 double mutants
GSE98561	Comprehensive single cell transcriptional profiling of a multicellular organism by combinatorial indexing
GSE98576	Global transcriptional responce in C.elegans on a high glucose diet
GSE98758	Genome-wide DNA accessibility maps and differential gene expression using ChIP-seq, ATAC-seq and RNA-seq for the human secondary fibroblast cell line hiF-T and whole worms with and without knockdown of FACT complex
GSE98869	The C. elegans neural editome reveals an ADAR target mRNA required for proper chemotaxis
GSE100045	RNA-seq of C. elegans worms treated with RNAi toward daf-2 or cav-1 or left untreated (EV) to compare gene expression profiles
GSE100623	SET-9 and SET-26, the C. elegans homologs of human MLL5, are critical for germline development and longevity
GSE101964	Adult-specific trimethylation of histone H3 lysine 4 is prone to dynamic changes with aging in C. elegans somatic cells
GSE102213	ChIP-seq of UNC-30 and UNC-55 in C.elegans
GSE103177	Genome-wide regulatory architecture maps using ATAC-seq, H3K4me2 ChIP-seq, and PEAT in Drosophila S2 cells and ATAC-seq in whole worms
GSE107134	Regulation of Lifespan by Neural Excitation and REST [Day 2]
GSE107799	NHR-49/HNF4 integrates regulation of fatty acid metabolism with a protective transcriptional response to oxidative stress and fasting
GSE108848	SET-9 and SET-26 are H3K4me3 readers and play critical roles in germline development and longevity
GSE110701	Disruption in A-to-I editing levels affects C. elegans development more than a complete lack of editing
GSE110984	Role of mitochondrial unfolded protein response transcription fatcor ATFS-1 in lifespan of long-lived mitochondrial mutants
GSE111074	Neurohormonal signalling via a cytosolic sulfotransferase controls insulin sensitivity of C. elegans
GSE112053	Effects of larval density on gene regulation in C. elegans during routine L1 synchronization
GSE112109	Spatiotemporal regulation of liquid-like condensates in epigenetic inheritance
GSE112367	A Protein-Protein Interaction Underlies the Molecular Basis for Substrate Recognition by an Adenosine to Inosine RNA Editing Enzyme
GSE112484	Transcriptome analysis in the germline of wild-type (WT) n2 worm and nmad-1(ok3133) mutant at 20°C and 25°C.
GSE112487	Determine the genome-wide localization of nmad-1 and top-2 in the transgenic flag tagged strains
GSE112488	NMAD-1
GSE113187	The memory of environmental chemical exposure in C. elegans is dependent on the Jumonji demethylases jmjd-2 and jmjd-3/utx-1
GSE114160	Inter-species genetic regulation of longevity: Δhns E. coli activate C. elegans DAF-16 in distinct ways from IIS
GSE115324	Systematic evaluation of C. elegans lincRNAs with CRISPR knockout mutants
GSE115629	The interplay between small RNA pathways shapes chromatin landscapes in C. elegans
GSE115884	Spatio-temporal m(i)RNA architecture and 3' UTR regulation in the C. elegans germline
GSE119292	Transcriptional profiling of C. elegans on pathogenic Pseudomonas aeruginosa
GSE119294	C. elegans on pathogenic Pseudomonas aeruginosa
GSE122639	Binding of an X-specific condensin correlates with a reduction in active histone modifications at gene regulatory elements
GSE122973	Systematic evaluation of C. elegans lincRNAs with CRISPR knockout mutants [ChIP-Seq]
GSE123145	Regulation of Lifespan by Neural Excitation and REST [Day 10]
GSE123146	Regulation of Lifespan by Neural Excitation and REST
GSE124049	Neuronal Small RNAs Control Behavior Transgenerationally
GSE125597	Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants (GRO-Seq)
GSE125599	Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants (RNA-Seq)
GSE125600	Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants (sRNA-Seq)
GSE125601	Small RNA-mediated transgenerational silencing of histone genes impairs fertility in piRNA mutants
GSE126028	DamID of Dam::EMR-1 in Caenorhabditis elegans L1 larvae
GSE126954	A lineage-resolved molecular atlas of C. elegans embryogenesis at single cell resolution
GSE128112	Germ Granules Govern Small RNA Inheritance
GSE128968	Transcriptome analysis of mir-1-deficient and ins-1-deficient Caenorhabditis elegans
GSE129988	Stress Resets Transgenerational Small RNA Inheritance
GSE130685	Stage-specific combinations of opposing poly(A) modifying enzymes guide gene expression during early oogenesis
GSE130730	Identification of proteins and miRNAs that specifically bind an mRNA in vivo [total RNA]
GSE130732	Identification of proteins and miRNAs that specifically bind an mRNA in vivo [small RNA]
GSE130733	Identification of proteins and miRNAs that specifically bind an mRNA in vivo
GSE134573	RNAi pathways repress reprogramming of C. elegans germ cells during heat stress
GSE134683	Germ granules coordinate RNA-based epigenetic inheritance pathways
GSE137734	henn-1/HEN1 promotes germline immortality in Caenorhabditis elegans
GSE137831	HRPK-1, a conserved KH-domain protein, modulates microRNA activity during Caenorhabditis elegans development
GSE138029	Temporal transcriptional profiling of in vivo cellular reprogramming and transorganogenesis in C. elegans
GSE138220	A Tudor-domain containing protein, SIMR-1, mediates silencing of piRNA target mRNAs by the Mutator Complex
GSE141243	Widespread roles for piRNAs and WAGO-class siRNAs in shaping the germline transcriptome of Caenorhabditis elegans
GSE145217	A Small-RNA-Mediated Feedback Loop Maintains Proper Levels of 22G-RNAs in C. elegans
GSE145983	Analyses of CED-3 caspase and PMK-1 p38 MAPK in gene regulation in C elegans
GSE146056	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos (GRO-Seq)
GSE146057	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos (RNA-seq)
GSE146059	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos (Ribo-Seq)
GSE146060	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos (sRNA-IP-Seq)
GSE146061	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos (sRNA-Seq)
GSE146062	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos
GSE146618	poly(UG)-tailed RNAs in Genome Protection and Epigenetic Inheritance [RNA-Seq]
GSE146642	RNA sequencing of nas-38(ok4307), nas-38(tm2655) and wild type C. elegans during L4 lethargus using NextSeq500
GSE146801	Muscleblind Splicing Factor Regulates Longevity Through p38 MAPK Signaling
GSE146873	RNA m6A methylation of 3ʹ splice site prevents binding of U2AF35 to inhibit splicing
GSE148074	poly(UG)-tailed RNAs in Genome Protection and Epigenetic Inheritance [ncRNA-Seq]
GSE148134	poly(UG)-tailed RNAs in Genome Protection and Epigenetic Inheritance
GSE148737	Analysis of gene expression and polysome profiling in the presence and absence of glh-1 in C. Elegans
GSE150407	Genome-wide mapping of the heterochromatin mark H3K9me2 in loss-of-function mutant worms
GSE150690	The RNA phosphatase PIR-1 regulates endogenous small RNA pathways in C. elegans
GSE150960	Sequencing 22G small RNAs in WT and zsp-1(-) animals
GSE151035	Gene expression profile of sma-3 mutant Caenorhabditis elegans
GSE151340	Failure to maternally reprogram histone methylation causes developmental delay due to germline transcription in somatic tissues
GSE151399	A DEAD-box helicase drives the partitioning of a pro-differentiation NAB protein into nuclear foci
GSE151714	Protease-mediated processing of Argonaute proteins controls small RNA association [RNA-Seq]
GSE151717	Protease-mediated processing of Argonaute proteins controls small RNA association
GSE151828	Arginine methylation promotes siRNA-binding specificity for a spermatogenesis-specific isoform of the Argonaute protein CSR-1
GSE151847	C. elegans methionine/S-adenosylmethionine cycle activity is sensed and adjusted by a nuclear hormone receptor: RNA-seq dataset 2
GSE151848	C. elegans methionine/S-adenosylmethionine cycle activity is sensed and adjusted by a nuclear hormone receptor
GSE151916	A molecular mechanism to regulate neural-specific A-to-I editing during development
GSE152831	SNPC-1.3 is a sex-specific transcription factor drives male piRNA expression in C. elegans
GSE154322	Systematic Analysis of Long Intergenic Non-Coding RNAs in C. elegans Germline Uncovers Roles in Somatic Growth
GSE155072	Translation and codon usage regulate Argonaute slicer activity to trigger germline small RNA biogenesis [GRO-Seq]
GSE155073	Translation and codon usage regulate Argonaute slicer activity to trigger germline small RNA biogenesis [Ribo-Seq]
GSE155074	Translation and codon usage regulate Argonaute slicer activity to trigger germline small RNA biogenesis [RNA-Seq]
GSE155075	Translation and codon usage regulate Argonaute slicer activity to trigger germline small RNA biogenesis [RIP-Seq]
GSE155076	Translation and codon usage regulate Argonaute slicer activity to trigger germline small RNA biogenesis [ncRNA-seq]
GSE155077	Translation and codon usage regulate Argonaute slicer activity to trigger germline small RNA biogenesis
GSE156037	Atf-6 regulates lifespan through ER-mitochondrial calcium homeostasis
GSE156356	Comparative Transcriptomics of heads and tails between Steinernema carpocapsae and Caenorhabditis elegans
GSE156517	Transcriptome profiling (Whole RNA sequencing) to study the funciton of clk-2 in NMD pathway in C.elegans
GSE156716	Cell-type-specific profiling of loaded miRNAs from Caenorhabditis elegans reveals spatial and temporal flexibility in Argonaute loading [miRNA-seq]
GSE156721	Cell-type-specific profiling of loaded miRNAs from Caenorhabditis elegans reveals spatial and temporal flexibility in Argonaute loading
GSE157017	Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes
GSE157316	piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development [GRO-seq]
GSE157317	piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development [RNA-seq]
GSE157318	piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development [small RNA-IP-seq]
GSE157319	piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development
GSE158232	FHOD formin and SRF promote striated muscle development through separate pathways in C. elegans
GSE158274	Temporal transitions in post-mitotic neurons throughout the C. elegans nervous system
GSE158628	FNDC-1-Mediated Mitophagy and ATFS-1 Coordinate to Protect Against Hypoxia-Reoxygenation
GSE159078	Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos (Degradome-seq)
GSE162792	Nuclear receptor NHR-49 promotes peroxisome proliferation to compensate for aldehyde dehydrogenase deficiency in C. elegans
GSE163549	TENT5 cytoplasmic non-canonical poly(A) polymerases regulate the innate immune response in animals
GSE168500	CEST-2.2 stimulates lipid metabolism and promotes longevity in mitochondrial mutant animals (ChIP-Seq)
GSE168501	CEST-2.2 stimulates lipid metabolism and promotes longevity in mitochondrial mutant animals (RNA-Seq)
GSE168502	CEST-2.2 stimulates lipid metabolism and promotes longevity in mitochondrial mutant animals
GSE168795	MICU1 orchestrates the autophagic flux in a SPGL1- and VPS39-dependent manner
GSE168803	Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans
GSE169088	3D genomics across the tree of life reveals condensin II as a determinant of architecture type
GSE169330	Endomitosis controls tissue-specific gene expression during development
GSE169468	Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (Hi-C)
GSE171726	Critical contribution of 3’ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA [Ribo-seq]
GSE171733	Critical contribution of 3’ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA [RNA-seq]
GSE171747	Critical contribution of 3’ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA [miRNA-seq]
GSE171748	Critical contribution of 3’ non-seed base pairing to the in vivo function of the evolutionarily conserved let-7a microRNA
GSE171938	Bisection of the X Chromosome Disrupts the Initiation of Chromosome Silencing during Meiosis in Caenorhabditis elegans
GSE174646	Neuronal control of maternal provisioning in response to social cues
GSE174652	Coordinated Maintenance of H3K36/K27 Methylation by Histone Demethylases Preserves Germ Cell Identity and Immortality
GSE179484	Comparison of wild-type and ctbp-1(lf) AIA neuron transcriptional profiles in L4 larval stage C. elegans
GSE179811	Dual roles for piRNAs in promoting and preventing transgenerational gene silencing in C. elegans
GSE179825	RNA-sequencing of C. elegans long-lived mutants eat-2, ife-2, osm-5 and glp-1
GSE181288	Temporal transitions in post-mitotic neurons throughout the C. elegans nervous system [ChIP-seq]
GSE183331	RNAseq analysis of genes differentially expressed in C. elegans exposed to the mold Penicillium brevicompactum
GSE188270	Small RNAseq analysis of C.elegans from Parental P0 to F3 generations under hypoxic stress in both WT and hrde-1 mutant [small RNA-seq]
GSE188271	Transcriptome and Small RNA analysis of C.elegans from Parental P0 to F3 generations under hypoxic stress in both WT and hrde-1 mutant
GSE188489	Robust regulatory architecture of pan-neuronal gene expression
GSE188612	Topoisomerases I and II facilitate the translocation of condensin DC in C. elegans [ChIP-seq]
GSE188850	Topoisomerases I and II facilitate the translocation of condensin DC in C. elegans [RNA-seq]
GSE188851	Topoisomerases I and II facilitate the translocation of condensin DC in C. elegans
GSE190803	RNA-seq profiles of 5 differentially RNAi sensitive wild C. elegans strains in control and embryonic RNAi conditions
GSE192419	C. elegans L4 hypodermal SLAM-ITseq
GSE192793	C. elegans small RNA-seq profiling of a null mutant with a deletion of the entire lotr-1 coding sequence
GSE192794	LOTR-1 interacts with ZNFX-1 to balance epigenetic signals in the C. elegans germline
GSE192941	Analysis of PMK-1 p38 MAPK and PMK-1(D327E) Caspase Cleavage Resistant Mutant and Effect of DAF-16 (FOXO) Mutants on Gene Regulation in C. elegans
GSE193923	Neuronal ire-1 coordinates an organism-wide cold stress response by regulating fat metabolism - Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and ire-1(ok799) Transcriptomes During Cold Stress.
GSE197286	SGPL1 stimuates VPS39 recruitment to the mitochondria in MICU1deficient cells
GSE198682	Chromosomal duplications increase gene dosage and mRNA level in C. elegans
GSE198939	Starvation-induced changes in somatic Insulin/IGF-1R signaling drive metabolic programming across generations
GSE199326	RNA-sequencing of dsb-2, spo-11 and htp-3 mutants to identify mechanisms involved in somatic aging of C. elegans through meiotic dysfunction
GSE200640	Pan-neuronal ribotagging in fasted C. elegans
GSE200912	RAS-dependent ROS signaling in C. elegans.
GSE201645	Effect of mutated dhgd-1(tm6671) on C. elegans metabolism
GSE203532	Topoisomerases I and II facilitate the translocation of condensin DC in C. elegans [RNA-Seq II]
GSE203534	Topoisomerases I and II facilitate the translocation of condensin DC in C. elegans [ChIP-Seq II]
GSE205113	Sperm-inherited H3K27me3 epialleles are transmitted transgenerationally in cis
GSE206065	Condensin DC spreads linearly and bidirectionally from recruitment sites to create loop-anchored TADs in C. elegans (ChIP-seq and Hi-C data)
GSE213019	Gene expression analysis of C. elegans L1 larvae fed with wild-type Pseudomonas aeruginosa CF18 and P. aeruginosa CF18 gacA mutant
GSE214208	Long-term imaging reveals behavioral plasticity during C. elegans dauer exit.
GSE214300	C. elegans L4 hypodermal RNA polymerase DamID
GSE214396	Mechanisms of stop codon readthrough mitigation reveal principles of GCN1 mediated translational quality control
GSE214425	Intergenerational Neuroprotection by an Intestinal Sphingolipid in Caenorhabditis elegans
GSE215918	Inter- and trans-generational impact of H3K4 methylation in neuronal homeostasis (RNA-Seq)
GSE215919	Inter- and trans-generational impact of H3K4 methylation in neuronal homeostasis (ChiP-Seq)
GSE215921	Inter- and trans-generational impact of H3K4 methylation in neuronal homeostasis
GSE222056	Tissue-specific chromatin binding patterns of C. elegans heterochromatin proteins HPL-1 and HPL-2 reveal differential roles in the regulation of gene expression.
GSE222226	Molecular encoding of stimulus features in a single sensory neuron type enables neuronal and behavioral plasticity
GSE222360	Whole transcriptome sequencing explored the anti-aging and anti-obesity effect of naringin on high glucose induced Caenorhabditis elegans [microRNA].
GSE222361	Whole transcriptome sequencing explored the anti-aging and anti-obesity effect of naringin on high glucose induced Caenorhabditis elegans.
GSE223594	S-adenosylmethionine synthases specify distinct H3K3me3 populations and gene expression patterns during heat stress [CUT&Tag]
GSE223597	S-adenosylmethionine synthases specify distinct H3K3me3 populations and gene expression patterns during heat stress
GSE223919	C. elegans ADARs promote organismal survival to pathogen infection
GSE224075	The chromatin factors SET-26 and HCF-1 oppose the histone deacetylase HDA-1 in longevity and gene regulation in C. elegans [RNA-Seq]
GSE224076	The chromatin factors SET-26 and HCF-1 oppose the histone deacetylase HDA-1 in longevity and gene regulation in C. elegans [CUT&RUN]
GSE224078	The chromatin factors SET-26 and HCF-1 oppose the histone deacetylase HDA-1 in longevity and gene regulation in C. elegans
GSE226048	Alternation of gene expression when expressing FASN-CTF in ced-3(-) null animalsn under ER stress
GSE226715	Whole-body gene expression atlas of an adult metazoan
GSE234746	LET-381/FoxF and its target UNC-30/Pitx2 specify and maintain the molecular identity of C. elegans mesodermal glia that regulate motor behavior
GSE237224	Exploring the Impact of Cyclodipeptide on Fungal Metabolism: Insights into Membrane and Metabolic Responses [C. elegans]
GSE237226	Exploring the Impact of Cyclodipeptide on Fungal Metabolism: Insights into Membrane and Metabolic Responses
GSE237663	cohesin spreads bi-directionally to form chromatin jets in C. elegans
GSE237937	Sex-Specific Developmental Gene Expression Atlas Unveils Dimorphic Gene Networks in C. elegans
GSE239289	Germ granule association drives small RNA specificity for a nuclear Argonaute protein [sRNA-seq]
GSE239291	Germ granule association drives small RNA specificity for a nuclear Argonaute protein
GSE242371	Stimulation of immunity-linked genes by membrane disruption is linked to Golgi function and the ARF-1 GTPase
GSE242682	Altered gene expression linked to germline dysfunction following exposure to environmentally relevant level of DEET
GSE243434	Nucleus-Independent Transgenerational Small RNA Inheritance in Caenorhabditis elegans
GSE245895	Dynamic regulation of miRNA accumulation during C. elegans larval development [smallRNA-Seq 2]
GSE245899	Spliceosomal helicases DDX41/SACY-1 and PRP22/MOG-5 both contribute to proofreading against proximal 3’ splice site usage
GSE245901	Dynamic regulation of miRNA accumulation during C. elegans larval development [smallRNA-Seq 4]
GSE245904	Dynamic regulation of miRNA accumulation during C. elegans larval development
GSE252063	Modeling neurodevelopmental disorder-associated human AGO1 mutations in C. elegans Argonaute alg-1. [ribosome profiling]
GSE252064	Modeling neurodevelopmental disorder-associated human AGO1 mutations in C. elegans Argonaute alg-1. [smallRNA-Seq]
GSE252065	Modeling neurodevelopmental disorder-associated human AGO1 mutations in C. elegans Argonaute alg-1. [RNA-Seq]
GSE252066	Modeling neurodevelopmental disorder-associated human AGO1 mutations in C. elegans Argonaute alg-1.
GSE254319	Dynamic regulation of miRNA accumulation during C. elegans larval development [miRNA-Seq]
GSE254442	A low-abundance class of Dicer-dependent siRNAs produced from a variety of features in C. elegans
GSE261819	A progeria-associated BAF-1 mutation modulates gene expression and accelerates aging in C. elegans I
GSE261820	A progeria-associated BAF-1 mutation modulates gene expression and accelerates aging in C. elegans II