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Platform GPL2029 Query DataSets for GPL2029
Status Public on May 09, 2005
Title Rosetta/Merck Human 25k v2.2.1 microarray
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Rosetta Inpharmatics / Merck Pharmaceuticals
Manufacture protocol see manufacturer's web site
 
Description Oligonucleotide array on glass.
Contains 60-mer probes (60-mer).
Keywords = Human 25k microarray Merck
 
Web link http://www.rii.com
Contributor(s) Kulkarni A, Castle J
Submission date May 09, 2005
Last update date Jul 23, 2015
Contact name Amit V Kulkarni
E-mail(s) amit_kulkarni@merck.com
Phone 206-802-7352
Organization name Rosetta Inpharmatics / Merck Pharmaceuticals
Department Genomics
Lab Array Design
Street address 401 Terry Ave N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Samples (161) GSM74085, GSM74086, GSM74087, GSM74088, GSM74089, GSM74090 
Series (3)
GSE3299 Identification of biomarkers for tumor endothelial cell proliferation through gene expression profiling
GSE4170 Gene expression changes associated with progression and response in chronic myeloid leukemia
GSE5814 Widespread siRNA "off-target" transcript silencing mediated by seed region sequence complementarity

Data table header descriptions
ID Rosetta generated unique probe identifier
GeneID Entrez Gene identifier for the gene represented
GeneSymbol Gene symbol for the gene represented
GB_ACC GenBank Accession
PROBE_DERIVED_FROM_TRANSCRIPT Actual transcript sequence from which the probe was derieved
SPOT_ID spot identifier
RosettaGeneModelID Rosetta internal gene identifier.

Data table
ID GeneID GeneSymbol GB_ACC PROBE_DERIVED_FROM_TRANSCRIPT SPOT_ID RosettaGeneModelID
10012670584 9211 LGI1 NM_005097 NM_005097 HSG00268279
10012675840 91966 CXorf40 NM_178124 non-public HSG00254906
10012687928 AK123451 non-public HSG00286394
10012676370 27177 IL1F8 NM_014438 NM_014438 HSG00213369
10012684239 23293 C17orf31 NM_017575 NM_017575 HSG00301568
10012685265 AK023620 non-public HSG00351496
10012687692 AA258021 non-public HSG00355949
10012683197 26052 DNM3 AB020627 AB020627 HSG00201211
10012672849 80174 DRF1 NM_025104 non-public HSG00297697
10012666580 non-public RosettaGeneID: HSG00227451 HSG00227451
10012668026 57242 KIAA0509 AB007978 AB007978 HSG00201416
10012679522 127255 MGC22773 NM_145258 non-public HSG00204977
10012678964 NM_016181 NM_016181 HSG00352724
10012676222 27076 C4.4A NM_014400 NM_014400 HSG00306075
10012672631 8867 SYNJ1 NM_003895 NM_003895 HSG00315705
10012677828 58477 SRPRB AF141882 AF141882 HSG00221697
10012682378 84417 ECRG4 NM_032411 non-public HSG00213944
10012665907 non-public RosettaGeneID: HSG00207816 HSG00207816
10012686900 3658 IREB2 U20180 U20180 HSG00290235
10012679529 81928 CABLES2 NM_031215 non-public HSG00311271

Total number of rows: 24481

Table truncated, full table size 1320 Kbytes.






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