GEO help: Mouse over screen elements for information.
Status
Public on Jul 30, 2016
Title
Agilent-030447 UNMBIOCETI Biomphalaria glabrata 30K v1.0
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organisms
Schistosoma mansoni ; Biomphalaria glabrata ; Echinostoma paraensei Manufacturer
Agilent
Manufacture protocol
Publicly available cDNA sequences (2010) for Biomphalaria glabrata were assembled using Mira. Transcripts were analyzed and as needed reverse complemented for longest continuous ORF. A total of 30593 predicted transcripts, supplemented with 15 mitochondrial gene sequences from Biomphalaria glabrata, 26 (12 nuclear + 14 mitochondrial) gene sequences from Schistosoma mansoni and 12 (9 nuclear + 3 mitochondrial) gene sequences from Echinostoma paraensei) were used as targets for e-array (Agilent) design of unique 60-mer probe sequences. Single replicate probes were arranged in 8 x 60k custom microarray format with Agilent 60-mer SurePrint technology. Design name Biomphalaria glabrata Transcriptomev1_28Sep10. Created date 28 Sep 2010. Feature layout: randomized. Design ID:030447.
Catalog number
AMADID 030447
Description
Please note, this single spot/feature design (AMADID 030447) was superceded with a duplicate spot/feature design, using the same features. The updated array design is AMADID 033677. For access to this platform, contact coenadem@unm.edu for collaborator status needed to purchase microarray from Agilent
Contributor(s)
Adema CM , Rosenberg GH Submission date
Jul 17, 2015
Last update date
Jul 30, 2016
Contact name
Coen M Adema
E-mail(s)
coenadem@unm.edu Phone
505 277 2743
Organization name
University of New Mexico
Department
CETI Biology MSC03 2020
Street address
1 University of New Mexico
City
Albuquerque
State/province
NM
ZIP/Postal code
87131-0001
Country
USA
Samples (7)
GSM1826243 , GSM1826244 , GSM1826245 , GSM1826246 , GSM1826247 , GSM1826248
Series (1)
GSE71054 A comprehensive 30K microarray platform to test transcriptomic responses in Biomphalaria glabrata
Data table header descriptions ID Agilent-030447 Feature Extraction number
Row Col ProbeName GeneName SPOT_ID Probe ID SEQUENCE Target ID representative Genbank Entry Target Seq BLAST similarity to
Data table ID Row Col ProbeName GeneName SPOT_ID Probe ID SEQUENCE Target ID representative Genbank Entry Target Seq BLAST similarity to 1
1
1
GE_BrightCorner
GE_BrightCorner
GE_BrightCorner
2
1
2
DarkCorner
DarkCorner
DarkCorner
3
1
3
DarkCorner
DarkCorner
DarkCorner
4
1
4
c17721
c17721
c17721
c17721
ACAGTGATGGAGAGTACGGGGAAAATCTACGGTGGAAGTCCAATCAAATAAAAACCACGC
c17721
SRR000072.35982, SRR000072.125470, SRR000076.119022, SRR000072.49819, SRR000076.198651
TGTTTATAGAAGCTGTTGCTTTGAACATTGGCTCCCATGAAGGATAAGTTGTTATAAATTGAGGAAATCTTGAGAACTTAGCAATATCACTGGACACACTCTTAAGTAAAAAGTTGAACGTTTATACGTCGAACAATGCTATTTAATATTTTGTTCCTCGTTTGTACCGGACTAGCGGTCAGCAACGCTAAAACACAACCAGTCAAGTTGACAACGGCTGACATTAATGCTTTCCTGAACGCCCACAACGCGGCTCGTAAAGCAGTGGGTGTACCTGACTTGAAGTGGAACAGTTCGCTGAGTGTATCTGCAGGAAGCTACGGGTCTCAGTGTGAATGGGGTCACAGTGATGGAGAGTACGGGGAAAATCTACGGTGGAAGTCCAATCAAATAAAAACCACGCTGCACTTGCCACTTCTGCTAGTAACTAGCGTGGGTCGTCAAGAAGAAAGCAAGTACCGACCGGACCCCCTGACAAGTAGGTAAA
predicted protein [Physcomitrella patens subsp. patens]
5
1
5
contig_2747
contig_2747
contig_2747
contig_2747
CTAAATGTGGGATGCACTTCTTGTACATATTCATTGTCATTAAAGCTCCCTAAAGGTAAA
contig_2747
ES750255, EW999614, EV822573, EX006024
CTCCCTCAATCCTAGTACTCCTTGTACACCGGTCAGCGGAATCCTTAGTTGTGGCGAGAAACCAAAAGCTTTTAAAATAGAAGCATATGGGGATTCATATTATATTGGTTCCGAGGTTGGTAATTATCTGCGCATGTTCCGTGGCTCCTTGTATAAAAGATATCCCTCTATGTGGAGGAGGTTAATAACAATAGATGGAAGGAAAAAACTAGCATCTATGGGTTATGGGCATCACTCTCTGGCCACCAATATAACTCTGCTCAAAGCCAATGAAGTAGATGAAATCATTAATGGCTGTGATGAGAAATACAAAGCTGTGGCTCTTAGCTCGGATACTTCTTTTATAACACAAACAGCTAAGAGTAAAAGAGGCAACAGCTGGGTCCCCACTATTCCCAGTAGTTCCCACCACTTGGATGCTGTGCCATGTTCCACACATATAAATAGGAACAGATTGTCTAAAACAAAAATTAGAACTTTTCCTCTCTGTTTTGATGACACAGATCCATCACTGATTCATGAAAACTCCAATCAGAAAGAGGAATTGGTTCCAATACGATTGGATATGGAGATAGAAGGACAGAAGCTGAGGGATTGTTTTTACATGGAACAAGAATGAAACCTTAATTACCCCAGAACAGTTTGCTGAAATACTTTGTGATGACCTAGATCTGAATCCTGTCAACTTCATTCCAGCCATAGCTGGAGCTATTAGGCAACAGATTGAAAACACAGCTGTTCCTGAAGGAGCAGAAGAACAAGCTGACCAAAGAGTTATCATCAAATTAAACATTCATGTTGGCAATATATCTCTTGTGGATCAGTTTGAATGGGATATGTCTGAATCTCTTAACAGTCCTGAAGAATTTGCAACAAAATTGTGTGCTGAATTAGGACTTGGTGGAGAGTTTGTGACTGCCATAGCCTACAGTATACGAGGACATTTAAGTTGGCACCAGAGAACATATGCATTTAGTGAAGCACCTCTACCTGTTGTGGAAGTAGCATTTAGAAATCAGAATGAAGCTGACCAATGGTGCCCTTTCCTTGAAACCTTGACAGATGCAGAAATGGAAAAGAAAATTAGGGACCAGGACAGAAATACAAGGCGAATGCGAAGATTAGCCAATACAGCACCTACATGGTAATCAATTCCTATGAAGAGATGACATTTAGTCATTAGTGCAATGTCTTTTGTGTTTCAGTATCATTTTTGTGTAAAAAAAATAATTGTTACACACATGCTAAATGTGGGATGCACTTCTTGTACATATTCATTGTCATTAAAGCTCCCTAAAGGTAAAATAAAAAATATGTTGTGTAAAAAAAAAAAAAG
PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like [Aplysia californica]
13
1
13
c482
c482
c482
c482
GGTCCACAACTGATTACAATGCTAAATTTTTTATGAATGGTTAATTGTTCAGGTCTGGAG
c482
SRR005375.67379, SRR005375.193930, SRR005375.60616, SRR005375.216393, SRR005375.178551, SRR005375.185057, SRR005375.135228, SRR005375.71277, SRR005375.170758, SRR005375.89942, SRR005375.90332, SRR005375.141754, SRR005375.68005, SRR005375.219731, SRR005375.89165, SRR005375.20897, SRR005375.223908, SRR005375.72952, SRR005375.170876, SRR005375.157559, SRR005375.189252, SRR005375.125130, SRR005375.100098, SRR005375.110082, SRR005375.132286, SRR005375.113991, SRR005375.103067, SRR005375.204083, SRR005375.152040, SRR005375.59121, SRR005375.116250, SRR005375.127643, SRR005375.107418, SRR005375.85191, SRR005375.222367, SRR005375.201156, SRR005375.31330, SRR005375.300, SRR005375.100536, SRR005375.208192, SRR005375.200736, SRR005375.215234, SRR005375.232020, SRR005375.84246, SRR005375.155010, SRR005375.196866, SRR005375.114948, SRR005375.56482, SRR005375.34723, SRR005375.158413, SRR005375.207313, SRR005375.206222, SRR005375.197836, SRR005375.68070, SRR005375.140812
TTCAATCCTAGTGTCAAGGAGGACAGTCAGCAGGCTGTTCATTAGATCTTTCAATGTGTGTGTGGAGGCTTTCTTGCCCATTGGAGTTTTGTCAAATATCTGCAAAAAGCCACAATCTCAATGGTGAGGATACATTTAGCCGTACTAGTCAAAAAGATACTAAATATGTCTAAAGCATTAAAAGAACAGATCACTAGTGACTACTAATCCTTTCTCTAACCCATTCTGTCCACTATGATTGGCTTCTTCCAAGTGAAACAGTAATTGTAAATGATAGCTATTTTATTTAGTTCACTAGTATTAGTGATTGCTTTTCCATTTGGTCCACAACTGATTACAATGCTAAATTTTTTATGAATGGTTAATTGTTCAGGTCTGGAGTCAATTCATTCCCAAATAATGGATAGTTTTAATTCTAAATTTAAA
PREDICTED: cytoskeleton-associated protein 5-like isoform X1 [Aplysia californica]
14
1
14
contig_5839
contig_5839
contig_5839
contig_5839
AAACAGGTTCTGCCTAAAATTAAATGGTTCATGTTTTGATGGATGCCAACCTGGATTTTA
contig_5839
ES749376, ES750293
TGTGACGTCCCTCGAGGTGGTCGGAGCTGGTGTGTCTCACCCTTTAAGGGAACATTGGTGGAGGTCGTAATTTGGCCATACTTTAAAATTTAGCTTGTCGTCTGTATCTTCATACCCTCAAACCAATGGAGAAGCAGGTGTGGATGGATACTACCCGACAGACCCAACGTTTGATTCTGAAACCTGTTTCTATGCTAACGGGAGTGAGGATACCTATGACTTTCTGGTCTTGTTCAAAGTGCCAGTGTTGATCGATTACTTTATACTCATCAACAGACGAAAGACTGACAGTGTCAAATATTTGGCTAATTTACAAATCATAACTTATGACGCGTACAATGGTACAGTCATGAGATATACGCAGGTCGGCAACCCATCACAAGGAAACGGAGTCTACACTATTAAGCACAGTTCAAAGAACGTTCCTATCTCAATGTTTCGACTAGAAAATAAAACTCTACTACAGTTCTGTGAGATAGAGGCCTATGGAGAGTGTCAATACGGATGCTATGGATTGGATTGCACCAAAATATGCAGTGATAAATGCACAGACGTAGCCTGCGAAGTGAATGGAAGATGTCGGGAGTGTAACGATGGCTATTTCGGGGATACATGCGACCAAGCTTGTGGCCGTTGCGCCAAAAACAGGTTCTGCCTAAAATTAAATGGTTCATGTTTTGATGGATGCCAACCTGGATTTTACCC
Multiple epidermal growth factor-like domains 11 [Crassostrea gigas]
16
1
16
c454_ctg_0073
c454_ctg_0073
c454_ctg_0073
c454_ctg_0073
CCCTGACCTTCTGTCCTAATTAAAAAAGAAAATTAATATGCCTAAAAAGGCCAGAGATTG
c454_ctg_0073
SRR000072.54758, SRR000072.66477, SRR000076.67460, SRR000072.56853, SRR000076.24178, SRR000072.9969, SRR000072.84100, SRR000076.57152, SRR000076.103674, SRR000076.184488, SRR000076.198974, SRR000076.118051, SRR000076.82515, SRR000072.133954, SRR000076.103040, SRR000076.113545, SRR000076.9342, SRR000072.33138, SRR000072.48402, SRR000072.39323, SRR000076.155284, SRR000072.62512, SRR000072.84881, SRR000076.49576, SRR000076.180813, SRR000076.146860, SRR000076.101200, SRR000072.5969, SRR000076.158270, SRR000072.389, SRR000076.141676, SRR000076.159578, SRR000072.162664, SRR000076.183970, SRR000072.13458, SRR000076.118928, SRR000076.13830, SRR000076.139108, SRR000076.114888, SRR000072.88285, SRR000076.135766, SRR000072.117782, SRR000072.48730, SRR000076.114813, SRR000072.150506, SRR000076.77771, SRR000073.255, SRR000076.200939, SRR000076.123452, SRR000076.92908, SRR000076.197141, SRR000072.50549, SRR000072.118209, SRR000076.90225, SRR000072.24926, SRR000076.92822, SRR000076.185091, SRR000076.88744, SRR000076.95303, SRR000076.94088, SRR000076.119036, SRR000076.86932, SRR000076.48164, SRR000072.118267, SRR000076.134400, SRR000072.85367, SRR000076.75595, SRR000072.118663, SRR000076.131133, SRR000073.1411, SRR000076.61791, SRR000072.141157, SRR000076.15823, SRR000072.36384, SRR000076.140597, SRR000076.75870, SRR000076.8758, SRR000076.69043, SRR000072.62306, SRR000072.73355, SRR000073.599, SRR000076.125439, SRR000073.3177, SRR000076.36042, SRR000072.84217, SRR000076.155283, SRR000072.19530, SRR000076.138474, SRR000076.144735, SRR000072.95945, SRR000076.133925, SRR000076.95611, SRR000076.54564, SRR000072.11403, SRR000076.141216, SRR000076.87363, SRR000076.61216, SRR000076.176793, SRR000073.1344, SRR000076.18316, SRR000072.11800, SRR000076.23470, SRR000072.34582, SRR000076.99389, SRR000076.61835, SRR000072.101926, SRR000072.136888, SRR000076.93480, SRR000076.121519, SRR000076.164313, SRR000072.51055, SRR000072.56600, SRR000072.93664, SRR000072.43486, SRR000076.10893, SRR000076.102315, SRR000072.157134, SRR000072.150875, SRR000072.126036, SRR000072.129106, SRR000072.49565, SRR000072.67681, SRR000076.75374, SRR000072.131214, SRR000076.122997, SRR000072.21915, SRR000076.117951, SRR000076.78542, SRR000076.189764, SRR000072.105002, SRR000076.53830, SRR000076.198174, SRR000076.114936, SRR000072.11399, SRR000075.174, SRR000076.3710, SRR000072.73795, SRR000074.2867, SRR000076.32698, SRR000072.29371, SRR000076.188158, SRR000076.49377, SRR000076.178471, SRR000072.107164, SRR000076.200054, SRR000076.127509, SRR000076.130712, SRR000072.70273, SRR000076.143701, SRR000072.132957, SRR000072.119035, SRR000072.73532, SRR000072.16520, SRR000072.19145, SRR000076.56279, SRR000072.12606, SRR000072.69352, SRR000076.159186, SRR000072.112468, SRR000072.133745, SRR000076.130417, SRR000072.114389, SRR000076.127278, SRR000076.7626, SRR000072.89281, SRR000072.95277, SRR000076.166237, SRR000076.63484, SRR000072.15023, SRR000072.103627, SRR000076.184597, SRR000076.92120, SRR000076.106198, SRR000076.44375, SRR000076.144413, SRR000076.73582, SRR000076.82881, SRR000072.124442, SRR000072.119816, SRR000072.23804, SRR000072.87574, SRR000076.69049, SRR000076.142806, SRR000072.35615, SRR000076.32166, SRR000072.66922
CAAACCGGCAAATAGAACTTTTTTTTCTCTCTCTCGCTCATTGCCAGGGCAGTTATAAAAATCTTTGAAACTTTTAGATTCACGCGCTAAACTCTTAGACGTATCAAAATTTCAGACCTAGAAGTAGATCTAGCTCCTTTTCGTGAACCAAACTGATTTAGGAGGTTTACAGTAAATAAAAGATTCCGTCGGAAACTGTTAGTTCAAAAATATCGAGACATTATTCTATAACTAGACTCGTTTCTAACACAACTAGAGAAGCCAAACAAAAATATCAGAGGACATACAGTAGCAAATACCAGAAAAGTATATATCAATTAACAAAAGAGAAATAACTCAATCAATTCTCATTTCAAAAGTACGTCTGCTGCTAGTGCTTACTCAAACTTGTCAACAACAAGTCAAGCAATAGTCAGGAGTCCATTGAACAGTACTTGTCTTCAGGCGACAGAGCTGAAGTTTTTCAAGGAAAAGATTTTATAATTTCTCAAGTGAGAGAGCTCCATTTATACAAGTGACCAAAAAAAAGTTTTTCAATCGAGAGTATTGTTCTTCAGACGTCAATATTTTTTGGGAAATTCCCATTTTGTTATAAGAATAGCAACACATCCTTTTTTTAAAAAAAGAAAGCAGAAATCATGGAGTCACACGTGATAGCTTTAGCCATCGTTCTTTTCTACGCATGCGCGACGTACGCTCATCCGCCCAACAGCAGACGCGAAGATTTCAAACAGCTGGTGTCGCTTCTAGGTAAACTCAAGGACATAGACAGCAGTCAGCTTGCGCACCAGACTTCCGGGGACATTGTCACGGAATTGCAGGACTCTGTCGATCCCAAAAGCCGGAGTGGACAAAGACGCTCTGTCCAAAGCTCTCCTTAATCGATACGGAATGATGGTCAAACGTCAGGGTGAGTGGTCTTACGACTACGGTCTAGGTGGAGGCAGGTTCGGCAAGAGAAATTACGGCGATTACGGCATTGGGCGGTAGGAAGATTTGGACGGGATGTGGATCATGTTGACCTGTCGGACGCCAACGACCCTGACCTTCTGTCCTAATTAAAAAAGAAAATTAATATGCCTAAAAAGGCCAGAGATTGTATCTATTTAATTAAAATTTTCTAAAAGAAWAAAATAAAA
PREDICTED: uncharacterized protein LOC101857558 isoform X1 [Aplysia californica]
17
1
17
c257
c257
c257
c257
ACAGAAGTGAAAAGTTTTGCCAGTTATGACGAGACTTCGACGAGGGCGTACTTTGATAAG
c257
SRR005375.38788, SRR005375.80751, SRR005375.181962, SRR005375.202119, SRR005375.71155, SRR005375.180502, SRR005375.83433, SRR005375.146801, SRR005375.23751, SRR005375.48040, SRR005375.6928, SRR005375.73468, SRR005375.193636, SRR005375.52393, SRR005375.201555, SRR005375.183064, SRR005375.103170, SRR005375.220924, SRR005375.93257, SRR005375.216482, SRR005375.189281, SRR005375.193599, SRR005375.190433, SRR005375.226626, SRR005375.76222, SRR005375.131863, SRR005375.235579, SRR005375.98599, SRR005375.192912, SRR005375.223860, SRR005375.189633, SRR005375.12272, SRR005375.192420, SRR005375.173533, SRR005375.39343, SRR005375.146098, SRR005375.225544, SRR005375.99838, SRR005375.159552, SRR005375.135519, SRR005375.193000, SRR005375.4690, SRR005375.179954, SRR005375.52674
TTTTTTTTGTATACGGTATCGGTTATCTCCCATGTGTTGGTAAAATCTCAAAATCGTATCCCATAGAAGCAATGATCTTCAATTCTGCAAGAGCATACGAAACTTGCTTAACAAACAAAACATAATTCAACGGAGACAATCACCTCTTTAAGTTTTACTTATAGAAAGTATGTGTCATTGAATCTCGTACATGTGAGGTCATTATACTTTACAGACAGAAGTGAAAAGTTTTGCCAGTTATGACGAGACTTCGACGAGGGCGTACTTTGATAAG
noGIDesc
20
1
20
c43495
c43495
c43495
c43495
CTAAATCGTAGAACGGTCTGGAATATTTAACACAGTCTCAAAGGCAGGACCATCATTAAA
c43495
SRR000072.17412, SRR005375.59408
TTTTAGATTTTCAAAAATTTTATATCATTGAAACAGTAATAAATAAGAAATCATTTATTTTCATGACACTCTAGGGAATTTCAAATTATTTTCTTCTATTTGGCAAGGAAAATACAAATATGCTAACTTGTAAAGAATACATCTCAAGACTTTTATAGACGCCTTTACATACAAATGTGCATTCTCTTTCATATCCTATCTAAACAATAATGTATTAAACTTTAAGCTACATTGTAACAAACCAAACAATTTCTATCTAGTCTTTTCTGCATGCATATTTCAATTCTAAATGTCTCGGGCAGTCGCAACAACTGCACTATTCATCCAGGCAAAGCTGTGCTATCTATCAATAATCAGTACCCGTCTGTGTGTCAGGTTGTGGAAGTATAGAATATTACAGAAGCTTAGCCCTAAATCGTAGAACGGTCTGGAATATTTAACACAGTCTCAAAGGCAGGACCATCATTAAA
noGIDesc
24
1
24
contig_11858
contig_11858
contig_11858
contig_11858
GGGGACTTATCTTAGCCTTTAAGCCGATGAATCCAATGTATGATTCGATTGAATTCACCG
contig_11858
ES486176
TGTGCCTGGCGTCTTCTGTTTCGGTGTCAGAAGACAACAGTTAGTGACACTCTCCTGTTTGTTTGATGTCTTGTCTTCTTTTACCAAACCCCCACCCCTTTTTCCTTTATATCCCGCCATGCTTTTTGGTACTTTAAAACAAAACTAACAAACAGGAGCCATTGCTTTGTACTTTATTAGTTAATCATGTCAGTTCAGCGATTCTCAAACCTCGAGCATGAATTGAAAGAATGCTACTTTTAGAACTTAATTCTTGCCTTTCACGGTAACAAGGTCACGTGGGGGAAATGGAGCAAGTATATACTTAGCAGAAATTAGTCTTGGCCACGTACAGAGTTATCTGTGGAGGTGAGTTATTGGCTCAGTTATCTATTCATGAGCAGAATATTAATAAAATATTCTGAAGGGGACTTATCTTAGCCTTTAAGCCGATGAATCCAATGTATGATTCGATTGAATTCACCGAGT
noGIDesc
26
1
26
c20808_rc
c20808_rc
c20808_rc
c20808_rc
GTCCATTAAAATGAACTTTTAAAAGTTACAAGATACTTTTTGTTTTTTAGTACACTAAGG
c20808_rc
SRR005375.32698, SRR005375.176880, SRR005375.126644, SRR005372.78607
TTTGTTGGTTGGTCATAGTTTTGACACAGTTTTAAAGTAGCTGTAACTGCATAATTAGCAAATGTTAGGTTTCACTTGATTAAATGAAATTCACATATATATACTGTTAGATTACCATTCTATGAATGTAGTGACACTGTTACATACAACATATTTACCTACAGAAAAAAATGTAACTTTTATATATATGCTTCATAATCCATACTGTCCATTAAAATGAACTTTTAAAAGTTACAAGATACTTTTTGTTTTTTAGTACACTAAGGMYATTTTAGTTGTCTTTTTT
noGIDesc
27
1
27
c29172_rc
c29172_rc
c29172_rc
c29172_rc
GAGATTTCACTGCACAAAGCTATTGTACATTTCTAGTGCATGTAAAGTCCAGTCAAATAT
c29172_rc
SRR000076.189160, SRR000076.84875, SRR000076.10969
AAATCTAACTTCCTTCTAAACAGAAAGAGATTTCACTGCACAAAGCTATTGTACATTTCTAGTGCATGTAAAGTCCAGTCAAATATATAAATATATTAAAATAAAACTTTAAAAAGTTATACATTTCATTAAGTCACTTGAATATGTCTTTAATGTGCTTAAAAGTCATCTAAACACTTTTTTTTTAGAGCCTTTGTCTATTTTTTTGTAAGTTAAAAGATGAAATTACAT
noGIDesc
28
1
28
c12714_rc
c12714_rc
c12714_rc
c12714_rc
CATCATTTCATTGGCCATCAAGTTGTCTCCCCATGCACCATTATTTATCAAAAACTTAAT
c12714_rc
SRR005375.14323, SRR005375.130138, SRR000072.29136, SRR000072.151618, SRR000076.183686, SRR005375.174364, SRR005375.29157, SRR000072.25501, SRR000072.11894
AAACAGTTTACACGTATTGCGATTCAGTGTAATTGTGCATTTATTTTGTTATCTTATAACAAAGTGAAAACAGAACTATTAAAACACCGTACACTCTTTAGCTTAGCAATTTAAGTGATATTAAAATGATTACTGATGTACAGCTTGCCATCTTTGCCAATGGCCTTGGAGTAGCTTTATTTCTCCTTGTGGTATTATATCACTATGTGTCAGTAAACAATGTTAAGAAATCAGACTGACCATGCTGTATTTGTTGTTATTGTTTTTTTAATTTAGCATCATTTCATTGGCCATCAAGTTGTCTCCCCATGCACCATTATTTATCAAAAACTTAATAAATTATACAAAATGTAMAAAAA
PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like isoform X1 [Aplysia californica]
31
1
31
contig_11058_rc
contig_11058_rc
contig_11058_rc
contig_11058_rc
GCGGGAGTAAGTTTGTATTTCCCAATGTAACGTAAAAGATCATAAAATACCTGTTAAGGT
contig_11058_rc
ES746138
TGGCTACAGATGCAATTGAGGAATTATCAAATAGCCTAAATATTCAACCAAGAAACAGTCTCTATTTGTATTTATAACTAATACATTTTTCAATCACAGATTTATCACATACTAGAAATATTTATAGCTTATGAATTATTATTATTTTTTTTACAGAAAAAAAGTTATTCGCGTCTTGATCAGAATATATGTATGGAAGGAAGGTTATAAAAATGTTTTTAATTAATCAACATTTTCAAAGGAAAATGTGAAGGGAGTGTATCATGTTACACAAGCAAAATTGTAATGAGCTCTTAATGTAAAAGAGTTGTAAAGTTAGGAAGAAATTATTGGGAGAGGGAAAAATGTTTCATTAATGTTCAACCTATTTACCTATTACATGGCAACACAACTACAACCAGTTGTTTCTGGGTGGTTAGAAGAATTGGTTGCATTCTGACTAAGAGCCTTACGGCCAGCGGGAGTAAGTTTGTATTTCCCAATGTAACGTAAAAGATCATAAAATACCTGTTAAGGTTGCTAAAAAGGAGAATGAAAATAAAAGAAAAAAAAAAGA
noGIDesc
32
1
32
contig_10572
contig_10572
contig_10572
contig_10572
TAAAACCTGAAGTTCATCTAAAGTCTCTGTCTCTGATCATTGGGCAGGAGGCCACTTCAC
contig_10572
ES750230
TGTTCATATTTTTGACAGCCATTGTGTTGTTACTATAGTGGATATAGAAAATAATAATAACGCTAACAATGCTGAATCATTTGTTTATATTTCAAAGATACACAGATTAATAAACAATTTCCTATTTATAGTGACAATGTCTCTTTGTTACTTCTGCCAATGAATGAATCCAATTCTGATTGTCATCACATGTCTGAATAATTGCACCAGCATACATCAATGCTTTCATCAGAAACATTGTCCAATGTGCATAAAGCCAGATGCCAAAGATGTCATCAAAACTATTGTCCAATGAATGTATAGCTTTTATACAACAGCTATTGGTTTTTGGTGTTGNTGTTAAACTGTGTGAGGCATTNAAGTATCCAGGAAGGTCATGGAGATTGCAGTAGAGTGACATTTATTTNGTTTCTGTGAAGAACTATTCGTGTTGTGATGTGGAAATAAAACCTGAAGTTCATCTAAAGTCTCTGTCTCTGATCATTGGGCAGGAGGCCACTTCACCTGT
noGIDesc
33
1
33
c9766_rc
c9766_rc
c9766_rc
c9766_rc
TCCTGGGCAGTTTTCTGGAAGTACCATTACATCCTATGCCCAAGATTGAGCATGTACTTT
c9766_rc
SRR005375.197733, SRR005375.201207, SRR005375.117981, SRR005375.215827, SRR005375.200787, SRR005375.226872, SRR005375.57557, SRR005375.173593, SRR005375.160210, SRR005375.40894, SRR005375.230019, SRR005372.15620, SRR005375.80590, SRR005375.190162, SRR005372.28442, SRR005372.31067, SRR005375.216951
TTTACAAATACAGAGAATTTATTGCAATGTTGATGTATATACAGTTAGAAGCAAGAGCTTTATAAGCTTGCACAGAAATGACTGAGTAGTGCCACTGTTATCGTCACAGCTAGCTAAGTTACAATAAGCTTTGAACAGAGCAAAAATTATCATGTGAGATGTGCACATCTTATAATAAGCACATCTAAATTAGCAGATGTATTTGTTGAAAAGTTTGCTATGTACTTCAATACTATCCCTCTGATTATACTAGAAATACGAGATTCTGTGCAGATGATATGTAATATGTTATTGTATGGCACTATCTAAGCCTTGAACATAATACTAACTGTGGTAGGCACATACAAATATCAGTGGCCTCTTAATCACATTTATAATATAATCTCTTTGGCGTTGTGTTAATCATTGTATAACTTGTCATAGGATTCCACTCAAGATCTTAGAATCTAACTCCTGGGCAGTTTTCTGGAAGTACCATTACATCCTATGCCCAAGATTGAGCATGTACTTTTTTTTCCCCTTTTCTACAT
noGIDesc
37
1
37
contig_2160_rc
contig_2160_rc
contig_2160_rc
contig_2160_rc
GATCAATTGTAGTTCATTGCTTTAAGTGCCTTGTGATATGCCAACCAGAGTTTCTTGTAT
contig_2160_rc
ES751434, ES487519, ES486202, EV822868, EX003779, ES483751, ES487025, EV820144
GTCACAGCAATGTTCAGACTTGACAGAAGAGTTAGAGTCATTGCGTGAAGATTTGGTGCACAAAAATGAAATGTTACAGCAGACGCAGAGTGAGATACAAAAATATGAAAAAGGAATTGAAAGTGTTTTAGCTGAACAAAGACTAAAAGATGAAGAGATCTGGCATAGAAAGCTGTCTGAACTAGAGCATAAACTAAATGATGCCAAGAGAGAACATGCCAAAACAGTTGTATCCCTGCGGCAAATGGAACGAAATCACACAAGAGAACTATCCAGAAATCAGGAGCTGCTTCAGACGACTGAAGACCATTTAAACAGGCAACTACTTCACACTCAAAATGAGTTGATCAAAGTGGAAAAAGAAAGAAATTTAATGCTGGCTATTTTGAAACAAGAAGGTTTAATTCATGCTCTTAAATCTGATAGAGGAGAACCGTACAAATTAGATGAGACTGTTGCACCGTTTGAAGAAGCTAGAAATGAAAACTTAACTCAAAACTCTGAACATCTCAATGCTGACGACTGTATAAGAGAAGAAAGTCATAACAATCTTCCTGGATCAAGCATTGGTAAAGAACATGTACAAGATGTATTGGAAGAGCTCAAGTCTTTAACGGCTGATCTATTGAATGATGAAAGTGATGAAGAATTGGATCAATTGTAGTTCATTGCTTTAAGTGCCTTGTGATATGCCAACCAGAGTTTCTTGTATAAAATAAAAAGTATTTAACTACT
PREDICTED: coiled-coil alpha-helical rod protein 1-like [Aplysia californica]
41
1
41
contig_11331
contig_11331
contig_11331
contig_11331
TGTGCTGAGAACCTTCCTGTACATAGTGTTGACAGACCAGTCTTTGAACTAAATAAGTGT
contig_11331
ES491481
TTTGAGTGTAATGATAGTTAATGTTGAATGTTATTTACTTGACTTTTAGTTGGATCTAGGAATCATCAAGCTCTCACTTCCATCCTGTGATCTGTGGGTTTTACTTGTGATTAGTCAGCATTAGTCAAGTCACCAATTAAATACAGTCCATTCCAAAACTAACAATGCTGATTTGGGCATCTGACCACAACAAGAGTACTCCTACTATAGTAAAGGTCACTTACCAAATCAGGCATTTGTATGATGTTAACAAGAAATATATATATATATCATTTAATATTGTATTTATCAATATCTTGCTTCACTCTTTCTCTAACTGGTAACTGGTAATAATCTGGAGGTTATTAGTTCATCTGTGCATAGCTGCTGTCATGCTGGTCAAATGTTATAAATAGATCACTGTGTCTATAGGATACAGAGTATTTATTTGGAAGTTTGAAATAACCTTGTGATCAAATGTATACATGTAGTGTGTGTGTGTGAATGAATGTATTTACCATTGCTGGATTAGGTGTGAATGTATTTGTAATGGTGGGCATGTGTTTGTGACTTTCAGTACAAGCTGCAGTGCTATTGACAAAAGAAAGATAACTCTTTCAGAAGTAATGTGCTTCAGCATTGCATGAAATCTGTTGTTTTATCTAAGTTACAAGAGAAGTCATAAACATTGATATTAGTTTGGTTTACTTTGATATTACTGACAGTATCGTGAGACCTACAAGATGCTGTGTTTTCAGTTTTATTTTCTTAGGACTATTATATTGGATTATAGACAACTTTTTCTTTCAAGATTTCAAGACTTCAATGTCTGGTAAAATATAGTCCATGACTAAAGATGGCCTGCCTCTTGTGCTGAGAACCTTCCTGTACATAGTGTTGACAGACCAGTCTTTGAACTAAATAAGTGT
noGIDesc
43
1
43
contig_13112_rc
contig_13112_rc
contig_13112_rc
contig_13112_rc
GGCTCTCAGACTGTATCGCAGTATGTATGTATATTTCTAAATGGGGATAACATACAATAT
contig_13112_rc
DW474194
GAAATAAAAAAAAAAAAGACTTTTTAAAACTAATTACAAAAAGTACAAAACTTCTTTAACTATCATAAATACTATCAAATAGAACAATGATTTATGTTAACAGTTGTACTTCTATTGTTTATATTCATCTTTCAAAAAATAGCTAATACAGTACTAAAACACAAAATAGCTATTATCTTTGTTCATATACGTAAAGTATTCTTAGTAATCAAATCCTTTAACCCAGAAAACTAATGTTACTATTTCAAGTACTTTGCAAAGCTTGATCTTTCAAAGAAAAATAATAAAAATATCTATGAAAAATAATAATCCAAGCCATACAAAGCATTTACACTTTTCATTCATTACATTGACTTTCCATTTCAATTATATGCTGTATGGATTGATCAACAAAACATGCCTTCAACAAAGCAATCTTTCAATAGTTTGTGTTAAAATAGACCTGAACTGAAACATCAACACTTTTATAATGTAAACAAAATTCTTTATTCAGCCATCTTGGCTCTCAGACTGTATCGCAGTATGTATGTATATTTCTAAATGGGGATAACATACAATATTAGGTGAAATAATGTAG
noGIDesc
31966 22964 Kbytes .Supplementary file Size Download File type/resource GPL20708_033677_D_GEO_20110413.txt.gz
2.0 Mb
(ftp) (http) TXT
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