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Platform GPL21258 Query DataSets for GPL21258
Status Public on Dec 29, 2015
Title Agilent-026377 Candida albicans 8x15K (AMADID: 026377) designed by Genotypic Technology Private Limited.
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Candida albicans
Manufacturer Agilent Technologies
Manufacture protocol www.chem.agilent.com
 
 
Submission date Dec 18, 2015
Last update date Dec 29, 2015
Contact name Genotypic technology
E-mail(s) sudha.rao@genotypic.co.in
Organization name Genotypic Technology
Street address 259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
City Bangalore
State/province Karnataka
ZIP/Postal code 560094
Country India
 
Samples (14) GSM1975533, GSM1975534, GSM1975535, GSM1975536, GSM1985617, GSM1985618 
Series (3)
GSE76165 ZCF32, a fungus specific Zn(II)2-Cys6 transcription factor, is a major regulator of the biofilm circuit in the human pathogen Candida albicans
GSE76383 Antifungal effect of Perillyl alcohol (PA) on C. albicans SC5314
GSE83080 Antifungal effect of Sesamol (Ses) on C. albicans SC5314

Data table header descriptions
ID Gene
ProbeName Oligonucleotide probe ID
SEQUENCE Oligonucleotide Probe sequence
Description Gene Description
ORF ORF ID
Gene

Data table
ID ProbeName SEQUENCE Description ORF Gene
CAF0006876 GT_Calbicans_Specific_01429;GT_Calbicans_Specific_06054;GT_Calbicans_Specific_06053 CAATACTTGGCCGCCTCATTCTCTTTGAAGAACGGTGACAGACCACACTTGTTAAAATTT;TCAAAGCTGAAAGAGTTGCTGACCAAAAATCTGTCGATGCTGCTTTATTAAGTGAAATCA;TGCTTTATTAAGTGAAATCAAAAAGACCCCATTATTGAAACAATACTTGGCCGCCTCATT "CAF0006876 (alignment of 60bp with 100.00% identity) , Description: Protein similar to S. cerevisiae Rpl6p, which is a ribosomal subunit; transposon mutation affects filamentous growth; translation-related orfs are downregulated upon phagocytosis by muri" orf19.3003.1 CAF0006876
CAF0006885 GT_Calbicans_Specific_06041;GT_Calbicans_Specific_00112;GT_Calbicans_Specific_06042 AACCCCTGAGAATTTGCCTACATTTGACAACATTTTGGGCTACGATGTTAGTGGCGGTGT;ACGATGTTAGTGGCGGTGTTGAAACCAATGGGGTAAAAGATTCATTGAAAATTATAAAGT;TTGAGAAGTTACCTACAAAAGCTATACTTGCTGGTGGGCTAACCCCTGAGAATTTGCCTA "CAF0006885(alignment 60bp with 100.00% identity) , Description: Phosphoribosylanthranilate isomerase; enzyme of tryptophan biosynthesis; expected to be unifunctional, unlike trifunctional enzyme of some other fungi; complements E. coli trpC or S. cerevisi" orf19.6096 CAF0006885
CAF0006887 GT_Calbicans_Specific_03054;GT_Calbicans_Specific_06079;GT_Calbicans_Specific_06080 GTTCCACAACCAGATATAACAATCACAGATAACAATACCCGTCTTGAAGAATTCAACAAA;TGTTCCACAACCAGATATAACAATCACAGATAACAATACCCGTCTTGAAGAATTCAACAA;TTGTTCCACAACCAGATATAACAATCACAGATAACAATACCCGTCTTGAAGAATTCAACA "CAF0006887 (alignment of 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 2721027..2721529 in Candida albicans Ca21chr1, Gene: orf19.68.2 , :: Next best Hit, CAL0001827 (alignment of 15bp with 100.00% iden" orf19.68.2 CAF0006887
CAF0006888 GT_Calbicans_Specific_06077;GT_Calbicans_Specific_06078;GT_Calbicans_Specific_02670 CATTTCTTTCGGCTAATTTTCTTTATCACCAGTCAAATGACCAAGGAATATGTTTGGATG;CTCTCCTTTTACATTTCTTTCGGCTAATTTTCTTTATCACCAGTCAAATGACCAAGGAAT;CTTTCGGCTAATTTTCTTTATCACCAGTCAAATGACCAAGGAATATGTTTGGATGAATTG "CAF0006888(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: Complement (2719038..2718745) in Candida albicans Ca21chr1, Gene: orf19.69.2 , :: Next best hit , location within target gene 229-288 , " orf19.69.2 CAF0006888
CAF0006889 GT_Calbicans_Specific_06100;GT_Calbicans_Specific_06099;GT_Calbicans_Specific_03551 AACATAGGGGGTGCAAACGAAAGCTTTTCATTTACTCTTGTTATTGTTCTCGATTGATAT;ACATAGGGGGTGCAAACGAAAGCTTTTCATTTACTCTTGTTATTGTTCTCGATTGATATA;CATAGGGGGTGCAAACGAAAGCTTTTCATTTACTCTTGTTATTGTTCTCGATTGATATAT "CAF0006889(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 911948..912199 in Candida albicans Ca21chr6, Gene: orf19.77.1 , :: Next best hit , location within target gene 179-238 , CAL0005638(alig" orf19.77.1 CAF0006889
CAF0006890 GT_Calbicans_Specific_03096;GT_Calbicans_Specific_06082;GT_Calbicans_Specific_06081 ACTAATCCTGCTTTAAGAATGGCAGCTAAAGTAGCAACAGAAACACCAGCTGCTCCAAAA;GTTTCAGTTCTTACTTGCTATATGGATGTCTTCTTCCCTAATACTAATCCTGCTTTAAGA;TGGATGTCTTCTTCCCTAATACTAATCCTGCTTTAAGAATGGCAGCTAAAGTAGCAACAG "CAF0006890 (alignment of 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 237906..238318 in Candida albicans Ca21chr6, Gene: orf19.131.2 , :: Next best Hit, CAL0002576 (alignment of 20bp with 95.00% identi" orf19.131.2 CAF0006890
CAF0006891 GT_Calbicans_Specific_03438;GT_Calbicans_Specific_06090;GT_Calbicans_Specific_06089 AGAAGATGGTTGAAAACAAGAAATGCATGTCCCTTGGATAGTACTAATTGGACTTATCAA;ATATTCCTTCAGAAGAGTGTATTCCTGCTTGGGGAGTATGTAATCATGCATTTCATTTAC;ATTCCTGCTTGGGGAGTATGTAATCATGCATTTCATTTACATTGTATTAGAAGATGGTTG "CAF0006891 (alignment of 60bp with 100.00% identity) , Description: Protein similar to S. cerevisiae Hrt1p, which is a component of a nuclear ubiquitin-protein ligase complex involved in cell cycle control; induced under hydroxyurea treatment, Location: " orf19.233.1 CAF0006891
CAF0006892 GT_Calbicans_Specific_06096;GT_Calbicans_Specific_03489;GT_Calbicans_Specific_06095 ATGGGGGAAACCAAAAAAGGAAAATACCAAAACTGAATATCCTGTATCCAAATCTTGGTT;GGGGGAAACCAAAAAAGGAAAATACCAAAACTGAATATCCTGTATCCAAATCTTGGTTAT;TGGGGGAAACCAAAAAAGGAAAATACCAAAACTGAATATCCTGTATCCAAATCTTGGTTA "CAF0006892(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 551644..551832 in Candida albicans Ca21chr3, Gene: orf19.242.2 , :: Next best hit , location within target gene 66-125 , CAL0005248(alig" orf19.242.2 CAF0006892
CAF0006893 GT_Calbicans_Specific_06131;GT_Calbicans_Specific_05711;GT_Calbicans_Specific_06132 ATAATCTAATGCTGTTCCAGATCCCAAGTCTGGCATCAAATCAGCGTCACGATCAATACA;CAGCGTCACGATCAATACAGGCTGGTAATACATTGTACAGTGTTCCACTTTGCATGCGAA;GAACGCATAGTCTGCTCGATGATGGTACATATAATCTAATGCTGTTCCAGATCCCAAGTC "CAF0006893(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 639474..639977 in Candida albicans Ca21chr3, Gene: orf19.298 , :: Next best hit , location within target gene 401-460 , CAL0006183(align" orf19.298 CAF0006893
CAF0006894 GT_Calbicans_Specific_06068;GT_Calbicans_Specific_02060;GT_Calbicans_Specific_06067 AGGCAGGTATCCAAGCAGGAGCTTCTTTACATTTGGTTTTAACTTTAAGAGGAGGTAACT;GCAGGTATCCAAGCAGGAGCTTCTTTACATTTGGTTTTAACTTTAAGAGGAGGTAACTAG;GGCAGGTATCCAAGCAGGAGCTTCTTTACATTTGGTTTTAACTTTAAGAGGAGGTAACTA "CAF0006894(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 699419..699652 in Candida albicans Ca21chr3, Gene: orf19.330.1 , :: Next best hit , location within target gene 173-232 , CAL0004945(ali" orf19.330.1 CAF0006894
CAF0006895 GT_Calbicans_Specific_06051;GT_Calbicans_Specific_01112;GT_Calbicans_Specific_06052 AACAAGCTGAAGCTAGAGCTGGTTTGATTGAAGGCAAAATGCACAACCATGGTGAAGATT;CACAACCATGGTGAAGATTGGGGTGCTGCTGCTGTCGAAATGGCCACTAAATTCAATTAA;CTTGACTTGTTTGACTGATGAACAAGCTGAAGCTAGAGCTGGTTTGATTGAAGGCAAAAT "CAF0006895(alignment 60bp with 100.00% identity) , Description: Lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, DMRL synthase); catalyzes the penultimate step in the synthesis of riboflavin, Location: 1166924..1167627 in Candida albicans Ca21" orf19.410.3 CAF0006895
CAF0006896 GT_Calbicans_Xhyb_00112 TATCTAGTCCTACTGGTGGTAAGGCTAAATTGGTTGATGGTTCTTCATTTAGAAGAAAGT "NOTE: Has potential for cross hybridization with other orfs; CAF0006896 (alignment 60 bp with 100 % identity) , Description: Predicted ribosomal protein S27; ORF Predicted by Annotation Working Group, Location: Complement (1155839..1155591) in Candida al" orf19.413.1 CAF0006896
CAF0006897 GT_Calbicans_Specific_06064;GT_Calbicans_Specific_01944;GT_Calbicans_Specific_06063 GACGTCTTGGACATTATTAATCCAACGGTGTCATTGGTATTCAACAAATGTTCAACACCA;GCAATCAACACCTTCTCGTTATTGAGTACGGTTCCAAATGTAGAGTTTGCATCTTGGATA;TCATTGGTATTCAACAAATGTTCAACACCAGCAATCAACACCTTCTCGTTATTGAGTACG "CAF0006897(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 1142135..1142629 in Candida albicans Ca21chr1, Gene: orf19.420 , :: Next best hit , location within target gene 373-432 , CAL0002676(ali" orf19.420 CAF0006897
CAF0006898 GT_Calbicans_Specific_05728;GT_Calbicans_Specific_06133;GT_Calbicans_Specific_06134 AACATCTGGTTTCTCCTCCACTGTCATCATGGTCACTGATGGATCAATTCTAGGTGGCAA;AATTTTTCAATTTGTTCTTTACACCCACCAACATCGCTGTATGTAACATCTGGTTTCTCC;TACCCAATTTGACAAATCTTTCTGGACTCAACAATGGCAATTCAACAACTTCTCTCAATT "CAF0006898 (alignment of 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 1104299..1104913 in Candida albicans Ca21chr1, Gene: orf19.442 , :: Next best Hit, CAL0005072 (alignment of 15bp with 100.00% ident" orf19.442 CAF0006898
CAF0006899 GT_Calbicans_Specific_06112;GT_Calbicans_Specific_03823;GT_Calbicans_Specific_06111 GAGTGATTTATCAAGTTCGTTGAAACAAGATTCCTTGAAATATAAACGAAGAGCCCAAAG;GCAATGTTGAGACAGTATATTCCAATCGTTGGTGCTGGTTTGATTTTTGTTTTTATGGTT;GCCCAAAGAATAAATTTTGAAGCAATGTTGAGACAGTATATTCCAATCGTTGGTGCTGGT "CAF0006899(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: Complement (899782..899055) in Candida albicans Ca21chrR, Gene: orf19.479.2 , :: Next best hit , location within target gene 495-554 , C" orf19.479.2 CAF0006899
CAF0006900 GT_Calbicans_Specific_04794;GT_Calbicans_Specific_06117;GT_Calbicans_Specific_06118 AGAGTCGAGCCTCCAAGAAGAATGGTGCAGAAAAAGAATGAGTCTGCTTCCAAGTATTTG;GTTATAATTGGATTGGTGCAAGAGTCGAGCCTCCAAGAAGAATGGTGCAGAAAAAGAATG;TTAGCACATGAGATTGGGTTCCGTTATAATTGGATTGGTGCAAGAGTCGAGCCTCCAAGA "CAF0006900 (alignment of 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 997186..997575 in Candida albicans Ca21chrR, Gene: orf19.542.2 , :: Next best Hit, CAL0000688 (alignment of 15bp with 100.00% ident" orf19.542.2 CAF0006900
CAF0006901 GT_Calbicans_Specific_06056;GT_Calbicans_Specific_06055;GT_Calbicans_Specific_01527 GAAGAGGATTTGAGTGAGGAAGAAACCATCAAATTAACTGTGAAATCACTTTTGGAAGTG;GTTCAAACAGGTGCTAAGAACATTGAAGTTTCTGTTTTGAAACCTGGTGCTGTTATAAAA;TTGACGAAATCAAAAAGTATGTAGATGCAATTGAGGCTGAAAAAGCTGCTGAAGCAGAGA "CAF0006901(alignment 60bp with 100.00% identity) , Description: Protein described as alpha-4 subunit of proteasome; reported as macrophage-induced protein and macrophage/pseudohyphal-repressed gene; regulated by Gcn2p and Gcn4p; removed from/reinstated in" orf19.544.1 CAF0006901
CAF0006902 GT_Calbicans_Specific_06072;GT_Calbicans_Specific_06071;GT_Calbicans_Specific_02108 AATACTCCAGACAAAGAGTGACCTTGAAAAAGAGGTTCGGATTGTTACCAACCCAAAACT;ATACTCCAGACAAAGAGTGACCTTGAAAAAGAGGTTCGGATTGTTACCAACCCAAAACTA;TACTCCAGACAAAGAGTGACCTTGAAAAAGAGGTTCGGATTGTTACCAACCCAAAACTAA "CAF0006902(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group; flucytosine induced, Location: Complement (1753003..1752824) in Candida albicans Ca21chrR, Gene: orf19.596.1 , :: Next best hit , location within " orf19.596.1 CAF0006902
CAF0006904 GT_Calbicans_Specific_06060;GT_Calbicans_Specific_06059;GT_Calbicans_Specific_01627 AAGTCACTTTTAAAGATAAACATGTAATGACTGCCAATCCAGCTACAATGAGATTAGCAG;AGTCACTTTTAAAGATAAACATGTAATGACTGCCAATCCAGCTACAATGAGATTAGCAGA;GTCACTTTTAAAGATAAACATGTAATGACTGCCAATCCAGCTACAATGAGATTAGCAGAT "CAF0006904(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 1115396..1115671 in Candida albicans Ca21chrR, Gene: orf19.639.1 , :: Next best hit , location within target gene 152-211 , CAL0002578(a" orf19.639.1 CAF0006904
CAF0006905 GT_Calbicans_Specific_06122;GT_Calbicans_Specific_05217;GT_Calbicans_Specific_06121 ACGAATACTTGACAGAATTGGAAAACCCTAAACTTATAAGTTGGGCTTCTCCTACCCATA;ACTGAGAAGGGAGGTCAATATAAATTATTGATCATGACATTTTTGGATAATAGCCAGGGT;TTGGGCTTCTCCTACCCATAAATCAACTGAATTTTGGTTAGAGAACAGTGGTAAATTTAA "CAF0006905(alignment 60bp with 100.00% identity) , Description: ORF Predicted by Annotation Working Group, Location: 1099638..1101114 in Candida albicans Ca21chrR, Gene: orf19.645.1 , :: Next best hit , location within target gene 1043-1102 , CAL0002401" orf19.645.1 CAF0006905

Total number of rows: 6202

Table truncated, full table size 2309 Kbytes.




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