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Status
Public on Jun 21, 2016
Title
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 (probesets grouped by R EventPointer package)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's website
Description
Affymetrix HTA_2,0 with probsets grouped by alternative splicing events identifiable with the array. Each event is divided into the 3 paths used by EventPointer algorithm
Submission date
Jan 15, 2016
Last update date
Jun 22, 2016
Contact name
Juan Pablo Romero
E-mail(s)
jromeror@unav.es Organization name
CIMA
Department
Hemato-Oncology
Lab
Advanced Genomics
Street address
Av. de Pío XII, 55
City
Pamplona
State/province
Navarra
ZIP/Postal code
31008
Country
Spain
Samples (27)
GSM2040329 , GSM2040330 , GSM2040331 , GSM2040332 , GSM2040333 , GSM2040334
GSM2040335 ,
GSM2040336 ,
GSM2040337 ,
GSM2040338 ,
GSM2040339 ,
GSM2040340 ,
GSM2040341 ,
GSM2040342 ,
GSM2040343 ,
GSM2040344 ,
GSM2040345 ,
GSM2040346 ,
GSM2040347 ,
GSM2040348 ,
GSM2040349 ,
GSM2040350 ,
GSM2040351 ,
GSM2040352 ,
GSM2040353 ,
GSM2040354 ,
GSM2040355 Series (1)
GSE76902 EventPointer: An effective identification of alternative splicing events using junction arrays
Relations Alternative to
GPL17586 (official)
Data table header descriptions ID unit Identifier for each of the measurable genes in the array
group Identifier to differentiate probsets that belong to the same gene
cell Cell in the array
SPOT_ID Ensemble gene
Data table ID unit group cell SPOT_ID ENSG00000000003_2_P1
1
1
1
ENSG00000000003
ENSG00000000003_2_P2
1
2
2
ENSG00000000003
ENSG00000000003_2_Ref
1
3
3
ENSG00000000003
ENSG00000000003_4_P1
2
1
4
ENSG00000000003
ENSG00000000003_4_P2
2
2
5
ENSG00000000003
ENSG00000000003_4_Ref
2
3
6
ENSG00000000003
ENSG00000000005_1_P1
3
1
7
ENSG00000000005
ENSG00000000005_1_P2
3
2
8
ENSG00000000005
ENSG00000000005_1_Ref
3
3
9
ENSG00000000005
ENSG00000000419_2_P1
4
1
10
ENSG00000000419
ENSG00000000419_2_P2
4
2
11
ENSG00000000419
ENSG00000000419_2_Ref
4
3
12
ENSG00000000419
ENSG00000000419_6_P1
5
1
13
ENSG00000000419
ENSG00000000419_6_P2
5
2
14
ENSG00000000419
ENSG00000000419_6_Ref
5
3
15
ENSG00000000419
ENSG00000000419_7_P1
6
1
16
ENSG00000000419
ENSG00000000419_7_P2
6
2
17
ENSG00000000419
ENSG00000000419_7_Ref
6
3
18
ENSG00000000419
ENSG00000000457_2_P1
7
1
19
ENSG00000000457
ENSG00000000457_2_P2
7
2
20
ENSG00000000457
220662 11205 Kbytes .Supplementary file Size Download File type/resource GPL21339_HTA_AS_r.cdf.gz
17.6 Mb
(ftp) (http) CDF
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