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Status
Public on Dec 13, 2016
Title
Agilent-074512 CBCmouselncRNAmRNA180k
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16074512 or 2574512. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
Submission date
Dec 12, 2016
Last update date
Dec 13, 2016
Contact name
Ming Cui
E-mail(s)
cuiming0403@bjmu.edu.cn
Organization name
Chinese Academy of Medical Sciences and Peking Union Medical College
Department
Institute of Radiation Medicine,
Street address
238 Baidi Road
City
Tianjin
ZIP/Postal code
300192
Country
China
Samples (144)
GSM2424429 , GSM2424430 , GSM2424431 , GSM2424432 , GSM2424433 , GSM2424434
GSM2424435 ,
GSM2424436 ,
GSM2424437 ,
GSM2424438 ,
GSM2424439 ,
GSM2424440 ,
GSM2424441 ,
GSM2424442 ,
GSM2424443 ,
GSM2424444 ,
GSM2424445 ,
GSM2424446 ,
GSM2424447 ,
GSM2424448 ,
GSM2482960 ,
GSM2482961 ,
GSM2482962 ,
GSM2482963 ,
GSM2482964 ,
GSM2482965 ,
GSM2482966 ,
GSM2482967 ,
GSM2482968 ,
GSM2510565 ,
GSM2510566 ,
GSM2510567 ,
GSM2510568 ,
GSM2510569 ,
GSM2510570 ,
GSM2510571 ,
GSM2510572 ,
GSM2510573 ,
GSM2510574 ,
GSM2510575 ,
GSM2510576 ,
GSM3034639 ,
GSM3034640 ,
GSM3314766 ,
GSM3314767 ,
GSM3314768 ,
GSM3314769 ,
GSM3314770 ,
GSM3314771 ,
GSM3314772 ,
GSM3314773 ,
GSM3314774 ,
GSM3314775 ,
GSM3314776 ,
GSM3314777 ,
GSM3361700 ,
GSM3361701 ,
GSM3361702 ,
GSM3361703 ,
GSM3361704 ,
GSM3361705 ,
GSM3361706 ,
GSM3361707 ,
GSM3361708 ,
GSM3361709 ,
GSM3361710 ,
GSM3361711 ,
GSM3400559 ,
GSM3400560 ,
GSM3400561 ,
GSM3400562 ,
GSM4148036 ,
GSM4148037 ,
GSM4148038 ,
GSM4148039 ,
GSM4148040 ,
GSM4148041 ,
GSM4148042 ,
GSM4148043 ,
GSM4148044 ,
GSM4162149 ,
GSM4162150 ,
GSM4162151 ,
GSM4162152 ,
GSM4162153 ,
GSM4162154 ,
GSM4162155 ,
GSM4162156 ,
GSM4162157 ,
GSM4191210 ,
GSM4191211 ,
GSM4191212 ,
GSM4191213 ,
GSM4191214 ,
GSM4191215 ,
GSM4191216 ,
GSM4191217 ,
GSM4191218 ,
GSM4191219 ,
GSM4191220 ,
GSM4191221 ,
GSM4191222 ,
GSM4191223 ,
GSM4191224 ,
GSM4191225 ,
GSM4191226 ,
GSM4191227 ,
GSM4558605 ,
GSM4558606 ,
GSM4558607 ,
GSM4558608 ,
GSM4558609 ,
GSM4558610 ,
GSM4558611 ,
GSM4558612 ,
GSM4558613 ,
GSM5201893 ,
GSM5201894 ,
GSM5201895 ,
GSM5201896 ,
GSM5201897 ,
GSM5201898 ,
GSM5201899 ,
GSM5201900 ,
GSM5201901 ,
GSM5201902 ,
GSM5582086 ,
GSM5582087 ,
GSM5582088 ,
GSM5582089 ,
GSM5582090 ,
GSM5582091 ,
GSM5582092 ,
GSM5582093 ,
GSM5582094 ,
GSM5582095 ,
GSM5582096 ,
GSM5582097 ,
GSM6755195 ,
GSM6755196 ,
GSM6755197 ,
GSM6755198 ,
GSM6755199 ,
GSM6755200
Series (17)
GSE92249
Gene expression profile of small intestine tissue from C57BL/6 mice with or without faecal microbiota transplantation
GSE94790
Comparison of lncRNA and mRNA expression profile among the livers of C57BL/6J control mice, high fat diet (HFD) mice and metformin treated mice
GSE94844
Microarray profiling of non-coding RNAs and mRNA expression among the livers of C57BL/6J control mice, high fat diet (HFD) mice and metformin treated mice
GSE95426
Comprehensive analysis of differentially expressed lncRNAs and mRNAs in aged mice
GSE111587
Adam12 and lnc015192 act as ceRNAs in breast cancer by regulating miR-34a
GSE117900
Expression data from OVA-induced allergic mice [Agilent]
GSE117916
Expression data from OVA-induced allergic mice
GSE119226
Development of gene expression signatures for WT (Hif1afl/fl) mice and VSMC-specific HIF1α disruption (Hif1a△SMC) mice VSMCs treated with 150μM CoCl2 for 24hours
GSE120417
Identification of differentially expressed lncRNAs in CpG ODN-activated macrophage
GSE139874
Integrative analysis of lncRNAs, miRNAs, and mRNA-associated ceRNA network in lung tissue of aging mice and changes after intervention of Codonopsis pilosula (lncRNA, mRNA datasets)
GSE139876
Integrative analysis of lncRNAs, miRNAs, and mRNA-associated ceRNA network in lung tissue of aging mice and changes after intervention of Codonopsis pilosula
GSE140454
The HDAC Inhibitor Sodium Butyrate Prevents Allergic Rhinitis and Alters lncRNA and mRNA Expression Profiles in the Nasal Mucosa of Mice
GSE140949
The effects of codonopsis pilosula on RNA expression profile in digestive system of D-galactose-induced aging mice
GSE150773
Study on the Mechanism of Codonopsis pilosula Enhancing Immune Function of Aging Mice Based on lncRNA-mRNA Network
GSE169398
Unraveling the molecular mechanism of hyperlipidemia using integrated lncRNA and mRNA microarray data
GSE184226
Effects of exercise on the expression of long non-coding RNAs in the bone of mice with osteoporosis
GSE218700
Mechanistic target of rapamycin complex 1 orchestrates the interplay between hepatocytes and Kupffer cells to determine the outcome of immune-mediated hepatitis
Data table header descriptions
ID
Agilent feature number
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
SEQUENCE
Sequence
Data table
ID
SPOT_ID
CONTROL_TYPE
SEQUENCE
GE_BrightCorner
GE_BrightCorner
pos
DarkCorner
DarkCorner
pos
A_55_P1983066
A_55_P1983066
FALSE
CTGGGTGCTGACGGACTCACAGCTCAAGGCGATGATGAAGTACGCCGAGTCGCTGAGTGA
A_52_P483409
A_52_P483409
FALSE
ATGGACAATTATTTTTCCCTCGTTTTTACTCAAACTAGTATGGCAACTGAGAGTTTCATG
A_55_P2360251
A_55_P2360251
FALSE
AGTTCTAACATTTTGTAACACAAATTACCCGTGGGCAGTCACTTAAAATATTGTACCTGG
ri|A830098F13|PX00157A05|1311
ri|A830098F13|PX00157A05|1311
FALSE
CCACTTTTTATTGCTGACCCAGGTGCACATTTGTTGGTTTGCAGAATCAGACACTCAGGA
NONMMUT066929
NONMMUT066929
FALSE
CTCCTGATAAGATTTTTCTATAATGTTGGAAGCCAAAGTGAAAGGAGACATTGTTAGCTA
ri|B230219D21|PX00070A04|3714
ri|B230219D21|PX00070A04|3714
FALSE
GTAGGGGGAGTATCCACACTGAACATCCACTGAAGACTAGTATCTTCTATTTTTCTAGGT
A_55_P2088272
A_55_P2088272
FALSE
CTGTTGTCCTCATCACACAAGTATTTGTGACTGTTGAAGGAATTCTCTTGTCAATATTAT
A_55_P2003891
A_55_P2003891
FALSE
ATTGGCAGCAGCCAGGGACTTGCTATTGATGAATTTTACATTAAATAGTCCTGTTGCCTT
A_51_P193686
A_51_P193686
FALSE
TCAATTAAGATACACGGGGGAGAAAAAAGGTTTTACCCTGTAATACTAATATGTACGTCA
A_55_P2154124
A_55_P2154124
FALSE
ACCATGACAACCGGTGACATTGCATACAGTTTAATATTGTGATGGGGTATCTAAGTAGGC
A_52_P558368
A_52_P558368
FALSE
GGCCTTGACTCTATGCAACACCCCACATTCGCGTAACGAGTGCACTTTAGGGACCTCAAG
A_51_P171697
A_51_P171697
FALSE
TCTGTTTGATTGAGTTTAGGTTCCGTCTGGGGAGGGGTCTAATGTTCTGATGGAGTCATT
A_55_P2278093
A_55_P2278093
FALSE
CTGCAAAAATCAGAGACCCCTTTATCCTTAGAGGGATACTTTAGATGTCTATAAGTTTTT
NONMMUT003574
NONMMUT003574
FALSE
CACGTATGGATCTGTTCTGGTGGAAGAGTGATCACTATTAAATGAAAGCTTTAATTTCCA
A_52_P585907
A_52_P585907
FALSE
CTTCGGGGACTTTATCATCAACGGGCCAGATACTGCCTATGGCATGATGGATTTCACCTA
A_55_P2177736
A_55_P2177736
FALSE
TTAAGCTTATGGTGGTCAGTGATTTGCTGTGTTATAGGGGTGATTAGTAATCTTTTGTGA
A_51_P419685
A_51_P419685
FALSE
TACTTGTGGTTGTGTTCAAGATGACTGGTGCTTACCAGTTTGGAGCCAGAAACAGAGCAA
ri|A130084B18|PX00692K09|2132
ri|A130084B18|PX00692K09|2132
FALSE
AAACTCTTCCAACTGATGTTGAATGACACCACACTAAAATTTGAAACTGCTTAAGAAACC
Total number of rows: 97904 Table truncated, full table size 9933 Kbytes .
Supplementary file
Size
Download
File type/resource
GPL22782_074512_D_GEO_20150409.txt.gz
6.2 Mb
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