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Platform GPL2507 Query DataSets for GPL2507
Status Public on Jun 03, 2005
Title Sentrix Human-6 Expression BeadChip
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina Inc.
Manufacture protocol
Catalog number BD-25-101
Description The Sentrix Human-6 BeadChip can be used to study expression of over 47,000 human transcripts. Researchers can generate whole-genome expression profiles for 6 samples in parallel on a single BeadChip. Array is composed of 3 micron features with average feature redundancy of 30-fold . All features are QCed by sequential hybridizations process called array decoding. Probes are fully screened all-full-length 50-mers. Assay requires 50-100ng of total RNA input. Array content is based on RefSeq and additional space is occupied by targets selected from Unigene build 163 and Gnomon databases.
Web link
Submission date Jun 01, 2005
Last update date Jun 03, 2005
Organization Illumina Inc.
Phone 1 800 809 4566
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
Samples (1420) GSM71605, GSM71607, GSM71609, GSM71611, GSM71615, GSM71616 
Series (55)
GSE3188 Hypoxic regulation of gene expression is dominated by the HIF system and can be mimicked by DMOG
GSE5095 MT1-MMP induces malignant transformation in Mammary cells
GSE5350 MicroArray Quality Control (MAQC) Project

Data table header descriptions
ID target ID
SequenceSource Source of the target sequence accession
GB_ACC RefSeq identifier
Annotation Date Date of build of sequence source (for UniGene and Gnomon)
SPOT_ID UniGene, Gnomon and control sequences

Data table
ID SequenceSource GB_ACC Annotation Date SPOT_ID
GI_10047089-S RefSeq NM_014332.1
GI_10047091-S RefSeq NM_013259.1
GI_10047093-S RefSeq NM_016299.1
GI_10047099-S RefSeq NM_016303.1
GI_10047103-S RefSeq NM_016305.1
GI_10047105-S RefSeq NM_016352.1
GI_10047121-S RefSeq NM_018843.1
GI_10047123-S RefSeq NM_018845.1
GI_10047133-A RefSeq NM_020140.1
GI_10047133-I RefSeq NM_020140.1
GI_10092578-S RefSeq NM_002217.1
GI_10092585-S RefSeq NM_007345.1
GI_10092596-S RefSeq NM_020533.1
GI_10092600-S RefSeq NM_003760.2
GI_10092602-S RefSeq NM_006093.2
GI_10092603-S RefSeq NM_020527.1
GI_10092611-A RefSeq NM_016326.2
GI_10092616-S RefSeq NM_020528.1
GI_10092618-S RefSeq NM_020529.1
GI_10092638-S RefSeq NM_016441.1

Total number of rows: 47293

Table truncated, full table size 1895 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL2507_Human_WG-6.csv.gz 3.7 Mb (ftp)(http) CSV

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