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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 22, 2019 |
| Title |
Illumina NovaSeq 6000 (synthetic construct) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
synthetic construct |
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| Submission date |
Apr 22, 2019 |
| Last update date |
Apr 22, 2019 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (346)
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GSM3732361, GSM3732363, GSM3732365, GSM3732367, GSM3732368, GSM3732369
GSM4477418, GSM4477420, GSM4477422, GSM4477424, GSM4477426, GSM4477428, GSM4667133, GSM4667134, GSM4667135, GSM4748610, GSM4748611, GSM4748612, GSM4748613, GSM5318825, GSM5318826, GSM5318827, GSM5318828, GSM5318829, GSM5318830, GSM5318831, GSM5318832, GSM5318833, GSM5318834, GSM5318835, GSM5318836, GSM5318837, GSM5318838, GSM5318839, GSM5318840, GSM5318841, GSM5318842, GSM5318843, GSM5318844, GSM5319006, GSM5319007, GSM5319008, GSM5319012, GSM5425007, GSM5425008, GSM5425009, GSM5425010, GSM5425011, GSM5425012, GSM5425013, GSM5425014, GSM5425015, GSM5425016, GSM5425017, GSM5425018, GSM5425019, GSM5425020, GSM5425021, GSM5425022, GSM5425023, GSM5425024, GSM5425025, GSM5425026, GSM5425027, GSM5425028, GSM5425029, GSM5425030, GSM5425031, GSM5425032, GSM5425033, GSM5425034, GSM5425035, GSM5425036, GSM5425037, GSM5425038, GSM5425039, GSM5425040, GSM5425041, GSM5425042, GSM5425043, GSM5425044, GSM5425045, GSM5425046, GSM5425047, GSM5425048, GSM5425049, GSM5425050, GSM5425051, GSM5425052, GSM5425053, GSM5425054, GSM5425055, GSM5425056, GSM5425057, GSM5425058, GSM5425059, GSM5425060, GSM5425061, GSM5425062, GSM5425063, GSM5425064, GSM5425065, GSM5425066, GSM5425067, GSM5425068, GSM5425069, GSM5425070, GSM5425071, GSM5425072, GSM5425073, GSM5425074, GSM5425075, GSM5425076, GSM5425077, GSM5425078, GSM5425079, GSM5425080, GSM5425081, GSM5425082, GSM5425083, GSM5425084, GSM5425085, GSM5425086, GSM5474122, GSM5474123, GSM5474124, GSM5474126, GSM5534849, GSM5534850, GSM5534851, GSM5534852, GSM5534853, GSM5534854, GSM5534855, GSM5574555, GSM5574556, GSM5574557, GSM5574561, GSM5574562, GSM5574563, GSM5766295, GSM5766296, GSM5766297, GSM5766298, GSM5766299, GSM5766300, GSM5766301, GSM5766302, GSM5766303, GSM5766304, GSM5861615, GSM5936688, GSM5936689, GSM5936690, GSM5936694, GSM5936695, GSM5936696, GSM5936700, GSM5936701, GSM5936702, GSM5943555, GSM5943556, GSM6093662, GSM6134045, GSM6134046, GSM6134048, GSM6134049, GSM6134050, GSM6134051, GSM6134052, GSM6339491, GSM6381762, GSM6381763, GSM6381764, GSM6381765, GSM6381766, GSM6381767, GSM6620210, GSM6620211, GSM6620212, GSM6620213, GSM6620214, GSM6620224, GSM6620225, GSM6620226, GSM6620227, GSM6620228, GSM6640320, GSM6640321, GSM6640322, GSM6640323, GSM6640324, GSM6640325, GSM6640326, GSM6640327, GSM6640328, GSM6640329, GSM6640330, GSM6640331, GSM6654458, GSM6654459, GSM6654460, GSM6654461, GSM6654462, GSM6654463, GSM6654464, GSM6654465, GSM6697338, GSM6703653, GSM6745700, GSM6761409, GSM6761410, GSM6761411, GSM6761412, GSM6761413, GSM6761414, GSM6761415, GSM6761416, GSM6761417, GSM6761418, GSM6911412, GSM6911413, GSM6911414, GSM6911415, GSM7042948, GSM7042949, GSM7042950, GSM7042951, GSM7042952, GSM7042953, GSM7042954, GSM7042955, GSM7042956, GSM7042957, GSM7042958, GSM7042959, GSM7224151, GSM7224152, GSM7224153, GSM7224154, GSM7224155, GSM7224156, GSM7661053, GSM7661054, GSM7661055, GSM7661056, GSM7661057, GSM7661058, GSM7661059, GSM7661060, GSM7661061, GSM7661062, GSM7661063, GSM7661064, GSM7661065, GSM7661066, GSM7661067, GSM7661068, GSM7661069, GSM7661070, GSM7661071, GSM7661072, GSM7661073, GSM7661074, GSM7661075, GSM7661076, GSM7666028, GSM7666029, GSM7666030, GSM7666031, GSM7666032, GSM7666033, GSM7666034, GSM7666035, GSM7666036, GSM7666037, GSM7669532, GSM7669533, GSM7669534, GSM7669535, GSM7669536, GSM7669537, GSM7669538, GSM7669539, GSM7669540, GSM7669541, GSM7669542, GSM7669543, GSM7669544, GSM7669545, GSM7669546, GSM7744228, GSM7744229, GSM7744231, GSM7744232, GSM7744234, GSM7744235, GSM7918658, GSM7918659, GSM7918660, GSM7918661, GSM7918662, GSM7918663, GSM7918664, GSM7918665, GSM7918666, GSM7918667, GSM7918668, GSM7918669, GSM7918670, GSM7918671, GSM7918672, GSM7918673, GSM7918674, GSM7918675, GSM7918676, GSM7918677, GSM7918678, GSM7918679, GSM7982757, GSM7982758, GSM7982759, GSM7982760, GSM7982761, GSM8043528, GSM8043529, GSM8043530, GSM8043531, GSM8043532, GSM8043533, GSM8043534, GSM8043535, GSM8057767, GSM8057768, GSM8057769, GSM8057770, GSM8057771, GSM8057772, GSM8057773, GSM8057774, GSM8057775, GSM8057776, GSM8057777, GSM8057778, GSM8120929, GSM8125104
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| Series (45)
|
| GSE130117 |
Simultaneous measurement of DNA repair activities and mRNA abundance in single cells |
| GSE154226 |
DEtail-seq profiled meiotic DSBs in Saccharomyces cerevisiae |
| GSE156933 |
A Quantitative Sequencing Method for 5-Formylcytosine in RNA |
| GSE174518 |
Nm-Mut-seq: The base-resolution quantitative method for mapping transcriptome-wide 2’-O-methylations |
| GSE174534 |
Multiple causal variants underlie genetic associations in humans |
| GSE179614 |
Rapid cell-free characterization of multi-subunit CRISPR effectors and transposons |
| GSE180879 |
Analysis of long and short enhancers in melanoma cell states |
| GSE182701 |
The high-throughput DICER cleavage assays on 23296 shRNA variants |
| GSE183937 |
DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers [Drosophila oligo UMI-STARR-seq] |
| GSE183939 |
DeepSTARR predicts enhancer activity from DNA sequence and enables the de novo design of synthetic enhancers |
| GSE192827 |
Genome-wide CRISPR screens decode cancer cell pathways that trigger gamma-delta T cell detection and killing |
| GSE192828 |
Genome-wide CRISPR screens decode cancer cell pathways that trigger gamma-delta T cell detection and killing |
| GSE196171 |
Whole genome functional characterization of RE1 silencers using a modified massively parallel reporter assay |
| GSE198047 |
High-throughput functional dissection of noncoding SNPs with biased allelic enhancer activity for insulin resistance-relevant phenotypes |
| GSE198281 |
Proliferative Receptor Binding Domain (RBD)-specific CD4+ T cells correlate with neutralizing antibody levels after natural SARS-CoV-2 infection and are induced following vaccination |
| GSE198440 |
Nucleosome sliding by the Chd1 chromatin remodeler relies on the integrity of the DNA duplex |
| GSE202064 |
Placental Interferon Signaling is Involved in Chronic Intervillositis of Unknown Etiology |
| GSE202841 |
Intrinsic RNA targeting constrains the utility of CRISPR-Cas13 systems [Screen] |
| GSE202899 |
Intrinsic RNA targeting constrains the utility of CRISPR-Cas13 systems |
| GSE207360 |
Mesenchymal glioma stem cells trigger vasectasia, a distinct neovascularization process mediated by extracellular vesicles carrying EGFR [scRNA-seq] |
| GSE208240 |
Systematic functional interrogation of SARS-CoV-2 host factors using Perturb-seq |
| GSE209646 |
m7G-quant-seq: Quantitative Detection of RNA Internal N7-Methylguanosine |
| GSE213876 |
Sequencing of N6-methyl-deoxyadenosine at single-base resolution across the mammalian genome |
| GSE215032 |
Dense, systematic mutagenesis to identify the features required for CSEs |
| GSE215033 |
Chamber selective enhancers identified in vivo by AAV-MPRA |
| GSE215065 |
Regulation of mouse chamber selective enhancers |
| GSE215790 |
The high-throughput human pri-miRNA processing assays |
| GSE216012 |
The high-throughput pri-miRNA cleavage assays on 262144 variants |
| GSE216899 |
Impact of a gain of function mutation in Fgfr3 gene on mandibular bone repair in a mouse model of hypochondroplasia, Fgfr3N534K/+ |
| GSE218471 |
Enhancer grammar of liver cell types and hepatocyte zonation states [12K_MPRA] |
| GSE218472 |
Enhancer grammar of liver cell types and hepatocyte zonation states |
| GSE218977 |
The anti-cancer compound JTE-607 reveals hidden sequence specificity of the mRNA 3' processing machinery |
| GSE220949 |
Reconstructing regulative progenitor behaviors in synthetic embryos |
| GSE221996 |
The SHAPE-MaP experiment to identify RNA structures of pri-mir-142 variants |
| GSE224204 |
Functional investigation of inherited noncoding genetic variation impacting the pharmacogenomics of childhood acute lymphoblastic leukemia treatment |
| GSE225263 |
Functional investigation of inherited noncoding genetic variation impacting the pharmacogenomics of childhood acute lymphoblastic leukemia treatment [MPRA] |
| GSE230464 |
3' RACE-seq of reporter LINE-1 and control mRNAs' 3' non-templated ends in 293T 'wild-type', XRN1 KO, DCP2 KO, DCP2 plus XRN1 KO cells |
| GSE238245 |
BID-seq for transcriptome-wide quantitative sequencing of mRNA pseudouridine at base resolution |
| GSE248109 |
3' RACE-seq of reporter and endogenous LINE-1 mRNA's 3' non-templated ends in 293T and PA-1 cells under permanent (genomic knock-out) or temporal (RNAi) depletions of XRN1, DCP2, (DIS3L2) and control conditions |
| GSE248679 |
circSHAPE-MaP of EPIC |
| GSE248680 |
Therapeutic application of circular RNA aptamers in a mouse model of psoriasis |
| GSE250601 |
Synthetic genetic circuit reveals overlapping binding sites underlie TF genomic occupancy |
| GSE254502 |
Massively Parallel Reporter Assay Confirms Regulatory Potential of hQTLs and Reveals Important Variants in Lupus and Other Autoimmune Diseases |
| GSE260829 |
Engineered CRISPR-Cas12a for higher-order combinatorial chromatin perturbations (CRISPR screen) |
| GSE260832 |
Engineered CRISPR-Cas12a for higher-order combinatorial chromatin perturbations |
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| Supplementary data files not provided |
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