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Status
Public on Jul 29, 2005
Title
CampyChip3
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Campylobacter jejuni Manufacturer
National Research Council, Canada
Manufacture protocol
PCR amplicons spotted onto microarray slides.
Description
Campylobacter jejuni microarray with 4608 spot features corresponding to 1600 of the 1634 ORFs of strain NCTC 11168, 181 ORFs from strain RM1221, 48 ORFs from the pVir plasmid of strain 81-176, and 32 ORFs from other strains. All genes are spotted in duplicate and sheared total genomic DNA from strain NCTC 11168 was used as a control.
Contributor(s)
Taboada EN , Carrillo CD , Findlay WA , Nash JH Submission date
Jul 27, 2005
Last update date
Sep 24, 2007
Contact name
John H Nash
E-mail(s)
John.Nash@gmail.com Organization name
National Research Council
Department
Institute for Biological Sciences
Street address
100 Sussex Drive
City
Ottawa
State/province
Ontario
ZIP/Postal code
K1A0R6
Country
Canada
Samples (134)
GSM66736 , GSM66758 , GSM66765 , GSM66768 , GSM81577 , GSM81578
GSM81579 ,
GSM81580 ,
GSM81581 ,
GSM81582 ,
GSM81583 ,
GSM81584 ,
GSM81585 ,
GSM81586 ,
GSM81587 ,
GSM81588 ,
GSM81589 ,
GSM81590 ,
GSM81591 ,
GSM81592 ,
GSM81593 ,
GSM81594 ,
GSM81595 ,
GSM81596 ,
GSM81597 ,
GSM81598 ,
GSM81599 ,
GSM81600 ,
GSM81601 ,
GSM81602 ,
GSM81603 ,
GSM81604 ,
GSM81605 ,
GSM81606 ,
GSM81607 ,
GSM81608 ,
GSM81609 ,
GSM81610 ,
GSM81611 ,
GSM81612 ,
GSM81613 ,
GSM81614 ,
GSM81615 ,
GSM81616 ,
GSM81617 ,
GSM81618 ,
GSM81619 ,
GSM81620 ,
GSM81621 ,
GSM81622 ,
GSM81623 ,
GSM81624 ,
GSM81625 ,
GSM81645 ,
GSM81646 ,
GSM81647 ,
GSM81648 ,
GSM81649 ,
GSM81650 ,
GSM81651 ,
GSM81652 ,
GSM81653 ,
GSM81654 ,
GSM81655 ,
GSM81656 ,
GSM81657 ,
GSM81658 ,
GSM81659 ,
GSM81660 ,
GSM81661 ,
GSM81662 ,
GSM81663 ,
GSM81664 ,
GSM81665 ,
GSM81666 ,
GSM81667 ,
GSM81668 ,
GSM81669 ,
GSM81670 ,
GSM81671 ,
GSM81672 ,
GSM81673 ,
GSM81674 ,
GSM81675 ,
GSM81676 ,
GSM81677 ,
GSM81678 ,
GSM81679 ,
GSM81680 ,
GSM251033 ,
GSM251034 ,
GSM251035 ,
GSM251036 ,
GSM251037 ,
GSM251038 ,
GSM251039 ,
GSM251040 ,
GSM251041 ,
GSM251042 ,
GSM251043 ,
GSM251044 ,
GSM251045 ,
GSM251046 ,
GSM251047 ,
GSM251048 ,
GSM251049 ,
GSM251050 ,
GSM251051 ,
GSM251052 ,
GSM251053 ,
GSM251054 ,
GSM251055 ,
GSM251056 ,
GSM251057 ,
GSM251058 ,
GSM251059 ,
GSM251060 ,
GSM251061 ,
GSM251062 ,
GSM251063 ,
GSM251064 ,
GSM251065 ,
GSM251066 ,
GSM251067 ,
GSM251068 ,
GSM251069 ,
GSM251070 ,
GSM251071 ,
GSM251072 ,
GSM251073 ,
GSM251074 ,
GSM251075 ,
GSM251076 ,
GSM251077 Series (3)
GSE3028 Genomic and Proteomic Characterization of Sessile and Planktonic Campylobacter jejuni NCTC 11168
GSE3579 CGH Analysis of C. jejuni isolates
GSE9919 CGH analysis of Campylobacter jejuni isolates previously analyzed by Multi-Locus Sequence Typing
Data table header descriptions ID
ReporterID unique ID for Reporter (used internally)
ReporterName name of Reporter (usually gene name)
Description description (usually predicted gene product)
ORF ORF identifier (usually identifier used in Entrez Genomes division)
SPOT_ID AmpSize size of PCR amplicon (in bases)
Block block on array
Column column in block
Row row in block
Data table ID ReporterID ReporterName Description ORF SPOT_ID AmpSize Block Column Row 1
cc3_0001
DS01
Cj11168 gDNA
Cj11168 gDNA
0
1
1
1
2
cc3_0001
DS01
Cj11168 gDNA
Cj11168 gDNA
0
1
2
1
3
cc3_0002
DS02
Cj11168 gDNA
Cj11168 gDNA
0
1
3
1
4
cc3_0002
DS02
Cj11168 gDNA
Cj11168 gDNA
0
1
4
1
5
cc3_0003
DS03
Cj11168 gDNA
Cj11168 gDNA
0
1
5
1
6
cc3_0003
DS03
Cj11168 gDNA
Cj11168 gDNA
0
1
6
1
7
cc3_0004
DS04
Cj11168 gDNA
Cj11168 gDNA
0
1
7
1
8
cc3_0004
DS04
Cj11168 gDNA
Cj11168 gDNA
0
1
8
1
9
cc3_0005
DS05
Cj11168 gDNA
Cj11168 gDNA
0
1
9
1
10
cc3_0005
DS05
Cj11168 gDNA
Cj11168 gDNA
0
1
10
1
11
cc3_0006
DS06
Cj11168 gDNA
Cj11168 gDNA
0
1
11
1
12
cc3_0006
DS06
Cj11168 gDNA
Cj11168 gDNA
0
1
12
1
13
cc3_0007
DS07
Cj11168 gDNA
Cj11168 gDNA
0
1
1
2
14
cc3_0007
DS07
Cj11168 gDNA
Cj11168 gDNA
0
1
2
2
15
cc3_0008
DS08
Cj11168 gDNA
Cj11168 gDNA
0
1
3
2
16
cc3_0008
DS08
Cj11168 gDNA
Cj11168 gDNA
0
1
4
2
17
cc3_0009
DS09
Cj11168 gDNA
Cj11168 gDNA
0
1
5
2
18
cc3_0009
DS09
Cj11168 gDNA
Cj11168 gDNA
0
1
6
2
19
cc3_0010
DS10
Cj11168 gDNA
Cj11168 gDNA
0
1
7
2
20
cc3_0010
DS10
Cj11168 gDNA
Cj11168 gDNA
0
1
8
2
4608 312 Kbytes .Supplementary data files not provided
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