GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Platform GPL2913 Query DataSets for GPL2913
Status Public on Oct 06, 2005
Title Center for Functional Analysis of Human Genome Human KUGI 24K (liver cancer)
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer The Center for Functional Analysis of Human Genome
Manufacture protocol cDNA microarrays were fabricated in our core facility using a robotic arrayer (PixSYS 5500, Cartesian; Ann Arbor, MI). The 24K microarray contains 24,288 genes from KUGI unigene library ( All the clones were verified by sequencing in our facility. The cDNA inserts were amplified by PCR, and after purification, spotted onto silylated glass slides (CSS-100; Telechem, Sunnyvale, CA). Each microarray slide contained control genes to normalize the effect of different fluorescent dyes.
Submission date Oct 04, 2005
Last update date Oct 06, 2005
Contact name Heun-Sik Lee
Phone 82-42-879-8121
Fax 82-42-879-8119
Organization name Korea Reaearch Institute of Bioscience and Biotechnology
Lab Human genomics
Street address 52 Eoeun-dong, Yuseong-gu
City Daejeon
ZIP/Postal code 305-333
Country South Korea
Samples (42) GSM81024, GSM81025, GSM81026, GSM81027, GSM81028, GSM81029 
Series (2)
GSE3536 Hepatoma cell lines vs. Universal control 3
GSE4003 Microarray analysis of LRRC3B stable cell derived xenograft tumors

Data table header descriptions
KU_ID Korean UniGene CLONE ID
GB_ACC GenBank Accession number
Gene_Title Gene title

Data table
1 KU000005 NM_001101 426930 actin, beta
2 KU000015 BC004319 169476 glyceraldehyde-3-phosphate dehydrogenase
3 Negative Control -- CONTROL
4 Negative Control -- CONTROL
5 Negative Control -- CONTROL
6 All DNA Mix 0.5 -- CONTROL
7 All DNA Mix 2 -- CONTROL
8 All DNA Mix 8 -- CONTROL
9 All DNA Mix 32 -- CONTROL
10 All DNA Mix 128 -- CONTROL
11 All DNA Mix 512 -- CONTROL
12 KU001923 BC009238 75318 tubulin, alpha 1 (testis specific)
13 KU005769 NM_000188 118625 hexokinase 1
14 KU000002 NM_005566 2795 lactate dehydrogenase A
15 KU010642 NM_007208 320961 mitochondrial ribosomal protein L3
16 KU000135 NM_000992 430207 ribosomal protein L29
17 KU000627 M31523 371282 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)
18 Negative Control -- CONTROL
19 Negative Control -- CONTROL
20 Negative Control -- CONTROL

Total number of rows: 24288

Table truncated, full table size 1651 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap