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Status
Public on Oct 27, 2005
Title
ResGenHs15K_DIO
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
DIO-Genomics
Manufacture protocol
The Research Genetics 40K sequence-verified clone human cDNA library (http://www.resgen.com/products/SVHcDNA.php3 ) was used to generate cDNA arrays, as described (Guerra, S., L. A. López-Fernandez, A. Pascual-Montano, M. Muñoz, K. Harshman, and Esteban, M. (2003) J. Virol. 77: 6493-6506.). Slides contained 15,360 cDNAs, of which 13,295 correspond to known genes and 2,257 to control genes. The cDNA resuspended in 50%DMSO was printed on CMT-GAPS II slides (Corning) with a Microgrid II (BioRobotics)
Support
glass
Coating
aminosilane
Description
Array is 4 x 12 (48 subarrays). Each subarray is 18 x 18.
Contributor(s)
Lopez-Fernandez LA , Muñoz M Submission date
Oct 25, 2005
Last update date
Oct 27, 2005
Contact name
Luis Andres Lopez-Fernandez
E-mail(s)
Luis.Lopez@cnb.uam.es Phone
34-915854657
Organization name
CNB-CSIC
Department
Immunology and oncology
Lab
Genomics Unit
Street address
Darwin 3
City
Madrid
State/province
Madrid
ZIP/Postal code
28049
Country
Spain
Samples (20)
GSM112207 , GSM112208 , GSM112299 , GSM112300 , GSM112301 , GSM112302
GSM112303 ,
GSM112304 ,
GSM112305 ,
GSM112306 ,
GSM112307 ,
GSM112308 ,
GSM112309 ,
GSM112310 ,
GSM112311 ,
GSM112312 ,
GSM112313 ,
GSM112314 ,
GSM112315 ,
GSM112316 Series (1)
GSE4988 Gene expression profiling of circulating plasma RNA from colorectal cancer patients
Data table header descriptions ID GENE_SYMBOL Symbol
GB_LIST GenBank Accession number
SPOT_ID Alternative ID
accUnigene Unigene Accession Number
GI GI Accession
GENE_NAME Description of gene
InsertSize* Size of Research Genetics Insert
Markers Markers
Antibiotics Antibiotic used in selection
Vector Vector in which isert is cloned
Chromosome Information about chromosome in which is located
Band Information about chromosome band
CLONE ID Clone ID
Tissue Tissue from which insert was cloned
Organism Organism
Data table ID GENE_SYMBOL GB_LIST SPOT_ID accUnigene GI GENE_NAME InsertSize* Markers Antibiotics Vector Chromosome Band CLONE ID Tissue Organism 1
KIAA0193
AA018659 Hs.75137
362729
KIAA0193 gene product;
2000
1813
Amp
pT7T3D (Pharmacia) with a modified polylinker
7
7p14.3-p14.1
g1481924
eye: retina
Homo Sapiens
2
TAF2H
AA235706 Hs.89657
723972
TATA box binding protein (TBP)-associated factor, RNA polymerase II, H, 30kD;
2000+
Amp
pT7T3D (Pharmacia) with a modified polylinker
11
11p15.3
g1860142
ovary: ovarian tumor
Homo Sapiens
3
FLNA
AA598978 Hs.195464
898281
filamin A, alpha (actin-binding protein-280);
2000+
stSG2963
Amp
pSPORT1
X
Xq28
g2432277
Homo Sapiens
4
UROD
AA424344 Hs.78601
760148
uroporphyrinogen decarboxylase;
807
WI-18590
Amp
pT7T3D-Pac (Pharmacia) with a modified polylinker
1
1p34
g2103314
Homo Sapiens
5
WNT4
AA434160 Hs.302428
770593
wingless-type MMTV integration site family, member 4;
1000
WI-16166
Amp
pT7T3D (Pharmacia) with a modified polylinker
1
1p36.23-p35.1
g2139074
ovary: ovarian tumor
Homo Sapiens
6
ISYNA1
AA454554 Hs.33713
809508
myo-inositol 1-phosphate synthase A1;
1041
A007B29
Amp
pT7T3D (Pharmacia) with a modified polylinker
19
19pter-p13.3
g2177330
ovary: ovarian tumor
Homo Sapiens
7
SCYA5
AA486072 Hs.241392
840753
small inducible cytokine A5 (RANTES);
732
RH103439
Amp
pBluescript SK-
17
17q11.2-q12
g2216288
lung
Homo Sapiens
8
AA181160 Hs.144301
625463
EST;
1651
stSG30960
Amp
pBluescript SK-
16
g1764627
Homo Sapiens
9
HPD
AA010605 Hs.2899
430314
4-hydroxyphenylpyruvate dioxygenase;
837
RK1290_1291
Amp
pT7T3D (Pharmacia) with a modified polylinker
12
12q24-qter
g1471631
Liver and Spleen
Homo Sapiens
10
GCP2
AA779105 Hs.13386
453348
gamma-tubulin complex protein 2;
1440
stSG43280
Amp
pT7T3D (Pharmacia) with a modified polylinker
10
10
g2838436
Liver and Spleen
Homo Sapiens
11
DGKH
AI382581 Hs.159073
2020508
diacylglycerol kinase, eta;
stSG62471
Amp
pT7T3D-Pac (Pharmacia) with a modified polylinker
13
13
g4195362
: B-cell, chronic lymphotic leukemia
Homo Sapiens
12
POU3F2
AI571395 Hs.182505
2170593
POU domain, class 3, transcription factor 2;
Amp
pT7T3D-Pac (Pharmacia) with a modified polylinker
6
6q16
g4534769
brain: anaplastic oligodendroglioma
Homo Sapiens
13
FLJ22672
H17393 Hs.235873
50487
hypothetical protein FLJ22672;
stSG2578
Amp
Lafmid BA
g883633
whole brain
Homo Sapiens
14
AA071122 N/A
530662
2000+
Amp
pBluescript SK-
Homo Sapiens
15
-- EMPTY
Homo Sapiens
16
-- EMPTY
Homo Sapiens
17
-- EMPTY
Homo Sapiens
18
-- EMPTY
Homo Sapiens
19
H56961 Hs.248424
204793
ESTs;
WI-18118
Amp
pT7T3D (Pharmacia) with a modified polylinker
9
g1009793
Liver and Spleen
Homo Sapiens
20
ENTPD1
AA287024 Hs.205353
701578
ectonucleoside triphosphate diphosphohydrolase 1;
stSG54864
Amp
pT7T3D-Pac (Pharmacia) with a modified polylinker
10
10q24
g1934030
: germinal center B cell
Homo Sapiens
15552 2454 Kbytes .Supplementary data files not provided
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