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Platform GPL350 Query DataSets for GPL350
Status Public on Dec 07, 2003
Title UHN Microarray Centre - Human 19K 3 (Part A)
Technology type spotted DNA/cDNA
Distribution custom-commercial
Organism Homo sapiens
 
Description cDNA microarrays are printed on CMT-GAPS slides (Corning Inc.) using high precision robotics. Contains 19008 characterized and unknown human ESTs. The 19k array is split over a pair of slides (Part A and Part B). Each EST was spotted in duplicate. This platform is the 19k array version 3 Part A. The cDNA microarray can be purchased at University Health Network (UHN) Microarray Centre, Ontario Cancer Institute (OCI), Toronto, Canada [ http://www.microarrays.ca ].
Keywords = cDNA microarray, ESTs
 
Web link http://www.microarrays.ca
Contributor(s) Mesak FM, Ng CE
Submission date Jul 09, 2003
Last update date May 26, 2005
Contact name Felix M. Mesak
E-mail(s) Felix.Mesak@orcc.on.ca
Phone 1-613-737 7700 ext. 6940-42
Fax 1-613-247 3524
Organization name Ottawa Regional Cancer Centre
Department Centre for Cancer Therapeutics
Lab Dr. Cheng E. Ng
Street address 503 Smyth Rd. 3rd Floor
City Ottawa
State/province ON
ZIP/Postal code K1H 1C4
Country Canada
 
Samples (47) GSM7801, GSM7802, GSM7803, GSM7807, GSM7808, GSM7809 
Series (6)
GSE522 X-radiation (XR) sensitive HCT116-CloneK: XR at 0 and 4 Gy
GSE524 HCT116-CloneK cells 10 minutes after XR treatment at 4 Gy
GSE525 HCT116-CloneK cells 6 hours after XR treatment at 4 Gy

Data table header descriptions
ID
gridR Grid (Subarray) Rows
gridC Grid (Subarray) Columns
R Rows
C Columns
CLONE-ID Clone ID
GB_ACC GenBank Accession Number
UNIGENE Unigene Cluster
GENE_NAME Gene Name
GENE_SYMBOL Gene Symbol
SPOT_ID

Data table
ID gridR gridC R C CLONE-ID GB_ACC UNIGENE GENE_NAME GENE_SYMBOL SPOT_ID
1 1 1 1 1 26087 R37412 77490 glutathione S-transferase theta 1 GSTT1
2 1 1 1 2 26087 R37412 77490 glutathione S-transferase theta 1 GSTT1
3 1 1 1 3 25953 R37034 7045 GL004 protein GL004
4 1 1 1 4 25953 R37034 7045 GL004 protein GL004
5 1 1 1 5 24501 T80479
6 1 1 1 6 24501 T80479
7 1 1 1 7 23805 R38384 269222 mitogen-activated protein kinase 4 MAPK4
8 1 1 1 8 23805 R38384 269222 mitogen-activated protein kinase 4 MAPK4
9 1 1 1 9 23790 T77410 145567 hypothetical protein AF038169
10 1 1 1 10 23790 T77410 145567 hypothetical protein AF038169
11 1 1 1 11 22568 T74308 271980 mitogen-activated protein kinase 6 MAPK6
12 1 1 1 12 22568 T74308 271980 mitogen-activated protein kinase 6 MAPK6
13 1 1 1 13 25511 R11726 10574 solute carrier family 2, (facilitated glucose transporter) member 8 SLC2A8
14 1 1 1 14 25511 R11726 10574 solute carrier family 2, (facilitated glucose transporter) member 8 SLC2A8
15 1 1 1 15 25361 R12142
16 1 1 1 16 25361 R12142
17 1 1 1 17 24004 R37846 78362 Human clone 23839 mRNA sequence
18 1 1 1 18 24004 R37846 78362 Human clone 23839 mRNA sequence
19 1 1 1 19 23427 T77020 118947 Homo sapiens cDNA FLJ33090 fis, clone TRACH2000559
20 1 1 1 20 23427 T77020 118947 Homo sapiens cDNA FLJ33090 fis, clone TRACH2000559

Total number of rows: 19200

Table truncated, full table size 1275 Kbytes.






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