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Platform GPL3631 Query DataSets for GPL3631
Status Public on Apr 05, 2006
Title Rosetta/Merck Rat 50k v2.1 Array 1 microarray
Technology type in situ oligonucleotide
Distribution commercial
Organism Rattus norvegicus
Manufacturer Rosetta Inpharmatics / Merck Pharmaceuticals
Manufacture protocol see manufacturer's web site
 
Description Oligonucleotide array on glass.
Contains 60-mer probes (60-mer).
 
Web link http://www.rii.com
Contributor(s) Kulkarni A, Castle J
Submission date Apr 05, 2006
Last update date Sep 28, 2006
Contact name Amit V Kulkarni
E-mail(s) amit_kulkarni@merck.com
Phone 206-802-7352
Organization name Rosetta Inpharmatics / Merck Pharmaceuticals
Department Genomics
Lab Array Design
Street address 401 Terry Ave N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Samples (507) GSM107713, GSM107714, GSM107715, GSM107716, GSM107717, GSM107718 
Series (4)
GSE5100 PPARalpha Agonists Induce a Fiber-Type Selective Transcriptional Response in Rat Skeletal Muscle
GSE31559 Various mice and rat tissues subjected to various treatments
GSE38037 Profiling brain cortex from tMCAO rat stroke model

Data table header descriptions
ID Rosetta generated unique probe identifier
GeneID Entrez Gene identifier for the gene represented
GeneSymbol Gene symbol for the gene represented
GB_ACC GenBank Accession
PROBE_DERIVED_FROM_TRANSCRIPT Actual transcript sequence from which the probe was derieved
SPOT_ID spots without GenBank Accession
RosettaGeneModelID Rosetta internal gene identifier.

Data table
ID GeneID GeneSymbol GB_ACC PROBE_DERIVED_FROM_TRANSCRIPT SPOT_ID RosettaGeneModelID
10011868738 310178 Myo10_predicted XM_226874 non-public RNG00217369
10011841336 AI177680 non-public RNG00201529
10020291847 361523 Cyp2b2 K00996 K00996 RNG00337838
10020289921 29285 Rps15 NM_017151 NM_017151 RNG00246473
10011833259 302363 XM_217566 non-public RNG00239968
10011846688 non-public RosettaGeneID: RNG00283788 RNG00283788
10011833002 AI175133 non-public RNG00275904
10011868623 295088 Gmps_predicted NM_001024754 non-public RNG00212060
10011864234 25055 Lipa NM_012732 non-public RNG00204487
10011836725 365802 NM_001014253 non-public RNG00311441
10011850977 83470 RGD:620739 XM_573814 non-public RNG00276592
10011831481 non-public RosettaGeneID: RNG00299883 RNG00299883
10011870356 AI045859 non-public RNG00305819
10020293506 114497 Trpm7 AF375874 AF375874 RNG00232000
10011848525 361118 RGD1309676_predicted NM_001014140 non-public RNG00281528
10011838479 AA996978 non-public RNG00228823
10011840117 315036 Cohh1_predicted XM_235384 non-public RNG00246903
10011845607 307652 RGD1307433_predicted NM_001014014 non-public RNG00291309
10011839530 353307 Slc29a3 NM_181639 non-public RNG00293418
10020294476 78972 Znf354c NM_023988 NM_023988 RNG00269817

Total number of rows: 23653

Table truncated, full table size 1349 Kbytes.






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Supplementary data files not provided

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