GEO help: Mouse over screen elements for information.
Status
Public on Feb 27, 2007
Title
NIA Mouse 22.4K cDNA array_Hepatotoxicity
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Mus musculus Manufacturer
University Health Network
Manufacture protocol
The clone sets from NIA were PCR amplified and purified before spotting on CMT-GAP II slides (Corning). Post Printing Quality Control tests include a real hybridization using commercially available mouse RNA, vector probe labeling and terminal transferase tailing method to assess spot morphology, background quality and intensity of signal. More information is available on http://www.microarrays.ca
Support
glass
Coating
aminosilane
Web link
http://www.microarrays.ca Contributor(s)
Rath SK , Noel S Submission date
Oct 05, 2006
Last update date
Jan 17, 2013
Contact name
Sanjeev Noel
E-mail(s)
sanjeevnoel@gmail.com Phone
91-9935392997
Organization name
Central Drug Research Institute
Department
Toxicology
Lab
Genotoxicity
Street address
M G Marg
City
Lucknow
State/province
Uttar Pradesh
ZIP/Postal code
226001
Country
India
Samples (38)
GSM138670 , GSM138671 , GSM138672 , GSM138673 , GSM138674 , GSM138675
GSM138676 ,
GSM138677 ,
GSM138678 ,
GSM138679 ,
GSM138680 ,
GSM138681 ,
GSM138682 ,
GSM138683 ,
GSM319224 ,
GSM319225 ,
GSM319226 ,
GSM319227 ,
GSM319230 ,
GSM319232 ,
GSM319233 ,
GSM319236 ,
GSM319238 ,
GSM319240 ,
GSM319243 ,
GSM319246 ,
GSM434508 ,
GSM434511 ,
GSM434515 ,
GSM434517 ,
GSM434519 ,
GSM434522 ,
GSM474868 ,
GSM474869 ,
GSM474870 ,
GSM474871 ,
GSM474872 ,
GSM474873 Series (5)
GSE5979 Differential gene expression in mice liver following primaquine administration
GSE5980 Differential gene expression in mice liver following bulaquine administration
GSE12716 Differential gene expression in mice liver following apigenin administration
GSE17392 Differential gene expression analysis of Mice liver treated with Amodiaquine and Sulfodoxine-Pyrimethamine
GSE19157 Microarray analysis of murine kidney treated with Amodiaquine and Sulfodoxine-Pyrimethamine
Data table header descriptions ID CloneID Clone ID from National Institute of Aging
UNIGENE Unigene Cluster ID
Name Gene Name
Symbol Gene Symbol
LLID Locus Link ID
GB_ACC GenBank accession number
CLONE_ID SPOT_ID LLRepProtAcc Entrez Gene Representative Protein Accession
Chromosome Chromosome Number
Cytoband Chromosomal Location
Data table ID CloneID UNIGENE Name Symbol LLID GB_ACC CLONE_ID SPOT_ID LLRepProtAcc Chromosome Cytoband 1
H3011H07
371682
Archain 1
Arcn1
213827
BC083152 H3011H07
NP_666097
9 A5.2
2
H3011H01
386921
Similar to Hemoglobin alpha subunit (Hemoglobin alpha chain) (Alpha-globin)
LOC383229
383229
AK049251 H3011H01
17 A3.3
3
H3011F07
193688
Protein tyrosine phosphatase 4a2
Ptp4a2
19244
AK155895 H3011F07
NP_033000
4 D2.3
4
H3011F01
248353
Host cell factor C1
Hcfc1
15161
BC053742 H3011F01
NP_032250
X C1|X 29.54 cM
5
H3011D07
28688
Seryl-aminoacyl-tRNA synthetase
Sars
20226
AK028358 H3011D07
NP_035449
3
3 F3|3 55.7 cM
6
H3011D01
H3011D01
7
H3011B07
272629
Ubiquitin specific peptidase 8
Usp8
84092
AK129003 H3011B07
NP_062703
2 F1
8
H3011B01
210018
Pleckstrin homology domain containing, family C (with FERM domain) member 1
Plekhc1
218952
AK141961 H3011B01
NP_666166
14 B
9
H3007H07
H3007H07
10
H3007H01
7472
Down syndrome critical region gene 3
Dscr3
13185
AB001990 H3007H01
NP_031860
16
16 C4
11
H3007F07
193181
Mitochondrial ribosomal protein L46
Mrpl46
67308
BU526391 H3007F07
NP_075820
7 D2
12
H3007F01
203
Apurinic/apyrimidinic endonuclease 1
Apex1
11792
BC052401 H3007F01
NP_033817
14
14 C3|14 18.5 cM
13
H3007D07
103522
PWP2 (periodic tryptophan protein) homolog, yeast
Pwp2h
110816
AK088983 H3007D07
NP_083822
10 C1|10 41.8 cM
14
H3007D01
5068
Sorbin and SH3 domain containing 3
Sorbs3
20410
AB190911 H3007D01
NP_035496
14
14 D1|14 34.5 cM
15
H3007B07
23987
Toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
Tirap
117149
AK151117 H3007B07
NP_473437
9
9 A5.3
16
H3007B01
23837
Leucine rich repeat containing 8D
Lrrc8d
231549
AK170452 H3007B01
NP_848816
5
5 E5
17
H3003H07
H3003H07
18
H3003H01
288206
Adenylate cyclase 7
Adcy7
11513
AK138911 H3003H01
NP_031432
8 C3|8 40.0 cM
19
H3003F07
285993
Calmodulin 1
Calm1
12313
BC054805 H3003F07
NP_033920
12 E
20
H3003F01
H3003F01
23040 2027 Kbytes .Supplementary data files not provided
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