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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 01, 2007 |
| Title |
Operon Mouse V3.0.1 printed oligonucleotide array |
| Technology type |
spotted oligonucleotide |
| Distribution |
non-commercial |
| Organism |
Mus musculus |
| Manufacturer |
Duke Microarray Facility (manufactured printing of arrays) |
| Manufacture protocol |
http://microarray.genome.duke.edu/spotted-arrays/protocols
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| Submission date |
Jan 24, 2007 |
| Last update date |
Jan 18, 2013 |
| Contact name |
Holly Kloos Dressman |
| E-mail(s) |
dress002@mc.duke.edu
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| Organization name |
Duke University Medical Center
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| Department |
Institute for Genome Sciences and Policy
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| Street address |
101 Science Drive
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| City |
Durham |
| State/province |
NC |
| ZIP/Postal code |
27708 |
| Country |
USA |
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| Samples (132)
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GSM158484, GSM158485, GSM158486, GSM158487, GSM158488, GSM158489
GSM158490, GSM158491, GSM158492, GSM158493, GSM158494, GSM158495, GSM158496, GSM158497, GSM158498, GSM158499, GSM158500, GSM158501, GSM158502, GSM158503, GSM158504, GSM158505, GSM158506, GSM158507, GSM158508, GSM158509, GSM158510, GSM158511, GSM271928, GSM271929, GSM271930, GSM271931, GSM271932, GSM271933, GSM271934, GSM271935, GSM271936, GSM271937, GSM271938, GSM271939, GSM271940, GSM271941, GSM271942, GSM271943, GSM271944, GSM271945, GSM271946, GSM271947, GSM271948, GSM271949, GSM271950, GSM271951, GSM271952, GSM271953, GSM271954, GSM271955, GSM271956, GSM271957, GSM271958, GSM271959, GSM271960, GSM271961, GSM271962, GSM271963, GSM271964, GSM271965, GSM271966, GSM271967, GSM271968, GSM271969, GSM271970, GSM271971, GSM271972, GSM271973, GSM271974, GSM271975, GSM271976, GSM271977, GSM271978, GSM271979, GSM271980, GSM271981, GSM271982, GSM271983, GSM271984, GSM271985, GSM271986, GSM271987, GSM271988, GSM271989, GSM271990, GSM271991, GSM271992, GSM271993, GSM271994, GSM271995, GSM271996, GSM271997, GSM271998, GSM271999, GSM272000, GSM272001, GSM272002, GSM272003, GSM272004, GSM272005, GSM272006, GSM272007, GSM272008, GSM272009, GSM272010, GSM272011, GSM272012, GSM272013, GSM272014, GSM272015, GSM272016, GSM272017, GSM272018, GSM272019, GSM272020, GSM272021, GSM272022, GSM272023, GSM272024, GSM272025, GSM272026, GSM272027, GSM272028, GSM272029, GSM272030, GSM272031
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| Series (3) |
| GSE6873 |
Gene expression signatures that predict radiation exposure (mouse) |
| GSE6874 |
Gene expression signatures that predict radiation exposure |
| GSE10640 |
Specific, Durable and Accurate Gene Expression Signatures of Radiation Response in Mice and Humans |
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| Data table header descriptions |
| ID |
Oligo ID |
| Gene Symbol |
Gene Symbol |
| GB_ACC |
Genbank or RefSeq accession number |
| GB_ACC |
Genbank or RefSeq accession number |
| Description |
Description of transcript |
| SPOT_ID |
identifier when no GB_ACC |
| SEQUENCE |
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| Data table |
| ID |
Gene Symbol |
GB_ACC |
GB_ACC |
Description |
SPOT_ID |
SEQUENCE |
| M200000001 |
Hoxa10 |
NM_008263 |
M81659 |
HOMEOBOX PROTEIN HOX-A10 (HOX-1.8). [Source:SWISSPROT;Acc:P31310] |
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TGGAAGCCTAGGTGGGCTGGGGCAAGCAGAAATAAAAATGAGAGAAGGGAGATATTGTTTGGATTTCCT |
| M200000002 |
Vim |
NM_011701 |
D50805 |
VIMENTIN. [Source:SWISSPROT;Acc:P20152] |
|
GCAGGATTTCTCTGCCTCTGCCAACCTTTTCTTCCCTGAACCTGAGAGAAACTAACCTGGAGTCACTTC |
| M200000004 |
Srm |
NM_009272 |
L19311 |
SPERMIDINE SYNTHASE (EC 2.5.1.16) (PUTRESCINE AMINOPROPYLTRANSFERASE) (SPDSY). [Source:SWISSPROT;Acc:Q64674] |
|
GACCAAGGATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCCA |
| M200000005 |
Myf6 |
NM_008657 |
X59060 |
MYOGENIC FACTOR MYF-6 (HERCULIN). [Source:SWISSPROT;Acc:P15375] |
|
GCCCCCAGTGGCCAAGTGTTTCGGATCATTCCAGGGGCCTCGTGATAACTGCTAAGGAAGGAGGAGCAA |
| M200000006 |
Bcap31 |
NM_012060 |
BC002106 |
B-CELL RECEPTOR-ASSOCIATED PROTEIN 31 (BCR-ASSOCIATED PROTEIN BAP31) (P28 BAP31). [Source:SWISSPROT;Acc:Q61335] |
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CTGGTGACCTGGCCTGCAGTTTGAACCCCTTTTTATTTTGCAATGTACCCTAAAGGAGGCTGCTGTGAA |
| M200000007 |
|
NM_017461 |
M37030 |
SEPTIN 1 (DIFFERENTIATION PROTEIN 6) (DIFF6 PROTEIN). [Source:SWISSPROT;Acc:P42209] |
|
AGAAAGTCAATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTCA |
| M200000008 |
1600014E20Rik |
NM_028045 |
AK005451 |
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GTATATGAGCAAACTCGCTCAGACTGTAAGGACCCAAATTATGGAGGATGTCCACACTGGGGCTGCAAA |
| M200000009 |
Hnrpab |
NM_010448 |
L36663 |
CARG-BINDING FACTOR-A (CBF-A). [Source:SWISSPROT;Acc:Q99020] |
|
GCCGAGTGACGACCGCACACGCTTTGTTTGGACGCGGAGTGAACACAATTATGTACCAAATTTAACTTG |
| M200000010 |
Gas2 |
NM_008087 |
M21828 |
GROWTH-ARREST-SPECIFIC PROTEIN 2 (GAS-2). [Source:SWISSPROT;Acc:P11862] |
|
CCTGTGCAGCCCCTTAGGAATAGCAGGTACCTTTTACACACAGAGAAGCTGTGTTTAGGATGATCACTT |
| M200000011 |
Bcl7b |
NM_009745 |
AJ011145 |
B-CELL CLL/LYMPHOMA 7B. [Source:RefSeq;Acc:NM_009745] |
|
ATGGAGGGCGTGGGGTCGTCGCACCATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCTCTTGAGCAAA |
| M200000012 |
Cops3 |
NM_011991 |
AF071313 |
"COP9 (CONSTITUTIVE PHOTOMORPHOGENIC), SUBUNIT 3 (ARABIDOPSIS); COP9 COMPLEX S3. [Source:RefSeq;Acc:NM_011991]" |
|
AGCCTCTCAGCAATGCTTACCATGAGTTAGCACAAGTTTATTCAACCAACAACCCGTCTGAGCTGCGGA |
| M200000014 |
Myla |
NM_010858 |
M19436 |
"MYOSIN LIGHT CHAIN 1, ATRIAL/FETAL ISOFORM (MLC1A) (MLC1EMB). [Source:SWISSPROT;Acc:P09541]" |
|
AGCCCCTCAAGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAGACTTCAGTGCTGACCAGATCGAAG |
| M200000016 |
D11Ertd99e |
NM_026618 |
BC026206 |
|
|
CCTAACTGTATGGACCATCTTCAAACTGCTGGATCCCCTGTATATGTTGAATGATGCCTGGTGGTCTTA |
| M200000017 |
Trim27 |
NM_009054 |
L46855 |
ZINC-FINGER PROTEIN RFP (RET FINGER PROTEIN) (TRIPARTITE MOTIF PROTEIN 27). [Source:SWISSPROT;Acc:Q62158] |
|
ATGCCATACCTTTACTTTCTCTCACGCTACCTTCTGTGGGCCAGTCCGGCCCTACTTCAGCCTAAGCTA |
| M200000019 |
Acr |
NM_013455 |
M96428 |
ACROSIN PRECURSOR (EC 3.4.21.10). [Source:SWISSPROT;Acc:P23578] |
|
AACGTAGTGACGGAGGGAAATGACATTGCGCTCTTGAAGATCACTCCTCCTGTTACATGTGGGAACTTC |
| M200000020 |
Itgb7 |
NM_013566 |
S63504 |
INTEGRIN BETA-7 PRECURSOR (INTEGRIN BETA-P) (M290 IEL ANTIGEN). [Source:SWISSPROT;Acc:P26011] |
|
TGACCTTGGCCCCTAACTTGGATGATGGCTGGTGCAAAGAAAGGACAATAGACAACCAGCTGTTCTTCT |
| M200000021 |
Pde1b |
NM_008800 |
M94538 |
"CALCIUM/CALMODULIN-DEPENDENT 3',5'-CYCLIC NUCLEOTIDE PHOSPHODIESTERASE 1B (EC 3.1.4.17) (CAM-PDE 1B) (63 KDA CAM-PDE). [Source:SWISSPROT;Acc:Q01065]" |
|
GTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGAACTAGGAAGCCCTCAT |
| M200000023 |
Frg1 |
NM_013522 |
BC002027 |
FRG1 PROTEIN. [Source:SWISSPROT;Acc:P97376] |
|
CACTGGACAATGGACTGTTTACACTGGGAGCTCCACACAGAGAAGTTGATGAAGGCCCCAGTCCTCCAG |
| M200000025 |
Prkdc |
NM_011159 |
U78158 |
DNA-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT (EC 2.7.1.37) (DNA- PKCS) (P460). [Source:SWISSPROT;Acc:P97313] |
|
AGGACCTCCTAGACCTTCGCTGACAGCAGTATATTTCTGACAGACAGAGGAAATCTACTTTATGGTGCT |
| M200000027 |
Itgae |
NM_172944 |
U12236 |
INTEGRIN ALPHA-E PRECURSOR (INTEGRIN ALPHA M290). [Source:SWISSPROT;Acc:Q60677] |
|
AGAGATCTCCGTGGGCCACACTAAGCAGTTACTAAGAGATGTATCTGAACTGCCGATCCTTGGTGAAAT |
Total number of rows: 31781
Table truncated, full table size 4511 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL4783_full_layout.txt.gz |
846.0 Kb |
(ftp)(http) |
TXT |
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