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Status
Public on Oct 06, 2003
Title
UHN Mouse 15k array
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Mus musculus
Description
http://www.microarrays.ca
Contributor(s)
Nantel A Submission date
Oct 03, 2003
Last update date
Jan 17, 2013
Contact name
Gundula Min-Oo
E-mail(s)
gundula.min-oo@mail.mcgill.ca Phone
5143982542
Organization name
McGill University
Department
Biochemistry
Street address
City
Montreal
State/province
Quebec
ZIP/Postal code
H3G 1Y6
Country
Canada
Samples (26)
GSM10997 , GSM10998 , GSM10999 , GSM11000 , GSM11001 , GSM11002
GSM11003 ,
GSM11004 ,
GSM11005 ,
GSM11006 ,
GSM11007 ,
GSM11008 ,
GSM11009 ,
GSM11010 ,
GSM76194 ,
GSM76195 ,
GSM76196 ,
GSM76197 ,
GSM76198 ,
GSM76199 ,
GSM76200 ,
GSM206732 ,
GSM206734 ,
GSM206736 ,
GSM206738 ,
GSM206740 Series (3)
GSE709 Malaria resistance
GSE3381 Differential susceptibility to Candida albicans in mice
GSE8339 Early mouse embryo development
Data table header descriptions ID CLONE-ID Clone ID from National Institute of Aging
GB_ACC GenBank accession number
COMMON Common name
MAP Position on chromosome
REFSEQ RefSeq accession number
UNIGENE Unigene number
DESCRIPTION Description#1
PRODUCT Description#2
SWISSPROT Description from Swissprot
FUNCTION Description#3
KEYWORDS Keywords
SPOT_ID
Data table ID CLONE-ID GB_ACC COMMON MAP REFSEQ UNIGENE DESCRIPTION PRODUCT SWISSPROT FUNCTION KEYWORDS SPOT_ID 1
H3001A01
AA407331 AA407331
18
204508
expressed sequence AA407331
2
H3001A02
AA407355 Sct
4
4723
secretin
secretin (Sct), mRNA
STIMULATES FORMATION OF NAHCO(3)-RICH PANCREATIC JUICE AND SECRETION OF NAHCO(3)-RICH BILE AND INHIBITS HCL PRODUCTION BY THE STOMACH.
Signal Transduction
Glucagon family, Hormone, Amidation, Cleavage on pair of basic residues, Signal
3
H3001A03
AA407362 D11Wsu99e
11
NM_138598 99677
DNA segment, Chr 11, Wayne State University 99, expressed
clone DT1P1E11 mRNA, CAG repeat region
4
H3001A04
AA407365 AA407365
11
200532
expressed sequence AA407365
complement component 1, q subcomponent binding protein (C1qbp), mRNA
NOT KNOWN. BINDS TO THE GLOBULAR HEADS OF C1Q THUS INHIBITING C1 ACTIVATION.
Matrix/Structural Proteins
Mitochondrion, Transit peptide
5
H3001A05
AA407381 37988
ESTs, Weakly similar to T17261 hypothetical protein DKFZp727I051.1 [H.sapiens]
6
H3001A06
AA407367 D2Wsu23e
2 6.0 cM
27840
DNA segment, Chr 2, Wayne State University 23, expressed
7
H3001A07
AA407369 AA407369
16
218738
expressed sequence AA407369
Energy/Metabolism
8
H3001A08
AA407375 Myo1b
1 24.8 cM
3390
myosin Ib
myosin Ib (Myo1b), mRNA
MOTOR PROTEIN THAT MAY PARTICIPATE IN PROCESS CRITICAL TO NEURONAL DEVELOPMENT AND FUNCTION SUCH AS CELL MIGRATION, NEURITE OUTGROWTH AND VESICULAR TRANSPORT.
Matrix/Structural Proteins
Myosin, ATP-binding, Actin-binding, Calmodulin-binding, Repeat, Multigene family, Alternative splicing
9
H3001A09
AA407377 D19Wsu12e
19 24.5 cM
222726
DNA segment, Chr 19, Wayne State University 12, expressed
cDNA: FLJ23309 fis, clone HEP11618
10
H3001A10
AA407378 D8Wsu26e
8 67.0 cM
24458
DNA segment, Chr 8, Wayne State University 26, expressed
11
H3001A11
AA407409 gephyrin
12
40282
Mus musculus, Similar to gephyrin, clone MGC:38765 IMAGE:5358943, mRNA, complete cds
gephyrin mRNA, complete cds
12
H3001A12
AA407413 Brd4
10
143755
bromodomain-containing 4
13
H3001B01
AA407441 AA407441
15
204266
expressed sequence AA407441
hypothetical protein FLJ11773 (FLJ11773), mRNA
14
H3001B02
AA407443 AA407443
4
202975
expressed sequence AA407443
cDNA FLJ10823 fis, clone NT2RP4001080, highly similar to mRNA for Rod1
15
H3001B03
AA407452 AA407452
6
30860
EST AA407452
clone PP902 unknown mRNA
16
H3001B04
AA407454 D9Wsu20e
9 42.0 cM
214650
DNA segment, Chr 9, Wayne State University 20, expressed
17
H3001B05
AA407468 Phemx
7 69.0 cM
NM_020286 28172
pan hematopoietic expression
Kcnq1, Ltrpc5, Mash2, Tapa-1, Tssc4 and Tssc6 genes, alternative transcripts
Transmembrane, Alternative splicing
18
H3001B06
AA407507 D4Wsu24e
4 57.6 cM
221305
DNA segment, Chr 4, Wayne State University 24, expressed
transposon-derived Buster2 transposase-like protein gene, partial cds
19
H3001B07
AA407512 D18Wsu100e
18 22.0 cM
206259
DNA segment, Chr 18, Wayne State University 100, expressed
zinc-binding protein Rbcc728 (Rbcc728), mRNA
Transcription/Chromatin
20
H3001B08
AA407514 Lyn
4 0.0 cM
1834
Yamaguchi sarcoma viral (v-yes-1) oncogene homolog
Mouse lyn B protein tyrosine kinase (lynB) mRNA, complete cds
Signal Transduction
Proto-oncogene, Tyrosine-protein kinase, Phosphorylation, Transferase, ATP-binding, Myristate, Palmitate, Lipoprotein, Alternative splicing
15247 2380 Kbytes .Supplementary data files not provided
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