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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 11, 2007 |
| Title |
3D-Gene Mouse Oligo chip 24k |
| Technology type |
spotted oligonucleotide |
| Distribution |
commercial |
| Organism |
Mus musculus |
| Manufacturer |
TORAY Industries, Inc. |
| Manufacture protocol |
See manufacturer's web site
|
| Catalog number |
See manufacturer's web site |
| Support |
other |
| Coating |
other |
| |
|
| Description |
Ultra-sensitive DNA chip for mouse genome wide gene expression analysis
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| |
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| Web link |
http://www.3d-gene.com
|
| Submission date |
Jul 24, 2007 |
| Last update date |
Apr 19, 2018 |
| Contact name |
Satoko Takizawa |
| E-mail(s) |
Toray3D-Gene@nts.toray.co.jp
|
| Phone |
+81-467-32-9351
|
| Fax |
+81-467-328364
|
| Organization name |
TORAY Industries, Inc.
|
| Department |
New Frontiers Research Laboratories
|
| Street address |
6-10-1 Tebiro
|
| City |
Kamakura |
| State/province |
Kanagawa |
| ZIP/Postal code |
248-8555 |
| Country |
Japan |
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|
| Samples (241)
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GSM306136, GSM306137, GSM451355, GSM452796, GSM452797, GSM466563
GSM466564, GSM466565, GSM466566, GSM466567, GSM562062, GSM562063, GSM562064, GSM606070, GSM606071, GSM606072, GSM606073, GSM606074, GSM606075, GSM621325, GSM683748, GSM683749, GSM703051, GSM703052, GSM703053, GSM746605, GSM746606, GSM746607, GSM746608, GSM746609, GSM746610, GSM822201, GSM822202, GSM822203, GSM822204, GSM822205, GSM822206, GSM822207, GSM822208, GSM822209, GSM845339, GSM866230, GSM866231, GSM866232, GSM915084, GSM915085, GSM915086, GSM915087, GSM915088, GSM915089, GSM915090, GSM915091, GSM948794, GSM948795, GSM948796, GSM948797, GSM957734, GSM957735, GSM957736, GSM957737, GSM957738, GSM957739, GSM957740, GSM957741, GSM957742, GSM994466, GSM994467, GSM994468, GSM1024520, GSM1030644, GSM1091208, GSM1125162, GSM1125163, GSM1125164, GSM1125165, GSM1147068, GSM1171893, GSM1185300, GSM1199330, GSM1223523, GSM1223524, GSM1223525, GSM1223526, GSM1223527, GSM1223528, GSM1223529, GSM1223530, GSM1223531, GSM1240539, GSM1240540, GSM1240541, GSM1240542, GSM1240543, GSM1240544, GSM1241831, GSM1261695, GSM1261696, GSM1261697, GSM1261698, GSM1261699, GSM1261700, GSM1306859, GSM1308279, GSM1370499, GSM1370500, GSM1370501, GSM1370502, GSM1370503, GSM1370504, GSM1370505, GSM1370506, GSM1370507, GSM1370508, GSM1402708, GSM1402709, GSM1402710, GSM1470103, GSM1496544, GSM1496545, GSM1496546, GSM1496547, GSM1623159, GSM1858308, GSM1858309, GSM1869989, GSM1869990, GSM1869991, GSM1869992, GSM1873370, GSM1873371, GSM1873372, GSM1873373, GSM1904312, GSM1904313, GSM1904314, GSM1904315, GSM1904316, GSM1904317, GSM1904318, GSM1904319, GSM1904320, GSM1904321, GSM1904322, GSM1904323, GSM1904324, GSM1906591, GSM1906592, GSM1958960, GSM1958961, GSM1982244, GSM1982245, GSM1982246, GSM1982247, GSM1982248, GSM1982249, GSM1982250, GSM1982251, GSM1982252, GSM1982253, GSM1982254, GSM1982255, GSM2067514, GSM2067515, GSM2078254, GSM2078255, GSM2078256, GSM2150214, GSM2152669, GSM2152670, GSM2186917, GSM2299284, GSM2299285, GSM2299286, GSM2355275, GSM2355276, GSM2355277, GSM2355278, GSM2355279, GSM2643318, GSM2643319, GSM2643320, GSM2643321, GSM2706345, GSM2706346, GSM2706347, GSM2706348, GSM2706349, GSM2706350, GSM2717332, GSM2752720, GSM2752721, GSM2752722, GSM2752723, GSM2752724, GSM2752725, GSM2752726, GSM2752727, GSM2752728, GSM2752729, GSM2752730, GSM2752731, GSM2752732, GSM2752733, GSM2752734, GSM2752735, GSM2752736, GSM2752737, GSM2752738, GSM2752739, GSM2767474, GSM2777021, GSM3068270, GSM3068271, GSM3106358, GSM3106359, GSM3106360, GSM3106361, GSM3106362, GSM3106363, GSM3106364, GSM3106365, GSM3416351, GSM3416352, GSM3416353, GSM3416354, GSM3416355, GSM3416356, GSM3554314, GSM3554315, GSM3554316, GSM3554317, GSM3729324, GSM3729325, GSM3729326, GSM3729327, GSM3729328, GSM3729329, GSM3729330, GSM3729331, GSM5686884, GSM5686885
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| Series (67)
|
| GSE12162 |
Murine Colon26 cells: Primary vs. liver metastasis |
| GSE18052 |
Analysis of gene expression levels in BBF2H7-/- chondrocytes |
| GSE18117 |
Differentiational potency of induced pluripotent stem cells into cardiomyocytes |
| GSE18813 |
Metastable primordial germ cell-like state induced from mouse embryonic stem cells by Akt activation |
| GSE22659 |
A Notch ligand, Delta-like 1 functions as an adhesion molecule for mast cells |
| GSE24588 |
Downregulation of the Wnt antagonist Dkk2 links loss of Sept4 and myofibroblastic transformation of hepatic stellate cells |
| GSE25258 |
Cells isolated from diaphragm of mdx mouse: satellite cells vs. PDGFRa+ cells |
| GSE27582 |
Mouse adult testes: Total RNA vs. IP RNA |
| GSE28438 |
LPS/GalN-induced liver injury model: wild-type vs. TMX-deficient mice |
| GSE30144 |
Identification of MVH target mRNA |
| GSE33206 |
The DSIF subunits Spt4 and Spt5 have several unexpected, distinct roles in regulating immunoglobulin class switch recombination |
| GSE34239 |
Murine Ba/F3 Cells: Ba/F3 cells expressing wild type JAK2 (WT cells) vs. Ba/F3 cells expressing JAK2 V617F mutant (VF cells) |
| GSE35334 |
The histone chaperone Spt6 is required for AID target determination through H3K4me3 regulation |
| GSE37261 |
Tracing the conversion process for primordial germ cells to pluripotent stem cells |
| GSE38733 |
Gene expression profile of STIM1 deficiency for cardiac remodeling in response to pressure overload by transverse aortic constriction (TAC) |
| GSE39191 |
P0-cre marked neural crest cells in murine embryo |
| GSE40456 |
Interaction of Wnt signaling with Smad signaling during myogenic differentiation in mouse myoblast cells |
| GSE41803 |
Wnt5a-deficient vs. wild-type E18 liver |
| GSE42014 |
Murine pulmonary arterial smooth muscle cells: Wild-type vs. NOX1 deficiency (mRNA profiling) |
| GSE42016 |
Murine pulmonary arterial smooth muscle cells: Wild-type vs. NOX1 deficiency |
| GSE44778 |
Lhx2-regulated genes in hematopoietic stem cell (HSC)-like cells differentiated from mouse embryonic stem (ES) cells |
| GSE46158 |
Microarray analysis of IdHP cells compared to LKS, Control ProB and E2A-/- progenitors |
| GSE47225 |
Murine ES Cells: Control vs. ETV4/5 double KO |
| GSE48189 |
Common primitive-definitive hematopoietic precursors vs. Definitve hematopoietic progenitor cells |
| GSE48826 |
Gene expression profiling in mouse livers after administration of both hydrogen-rich water and hydrogen gas |
| GSE49450 |
Murine lung exposed to cigarette smoke and poly(I:C): Thioredoxin-1 vs. Saline Treated |
| GSE50559 |
mRNA and microRNA in spleens of miR-17~92 transgenic mice |
| GSE51210 |
The change of mRNA expression in murine immortalized podocyte after miR-26a silencing |
| GSE51211 |
IL7R: WT vs mutant in vitro and in vivo. |
| GSE51283 |
Murine Osteoclasts: Stat5 flox vs. Stat5 cKO |
| GSE52239 |
Acetylated Histone Reader Brd4 functions as Repair Adaptor in Immunoglobulin Class Switch Recombination |
| GSE54079 |
TC-1 tumor: WT vs fat-1 |
| GSE54116 |
Ring1B Promotes Hepatic Stem/Progenitor Cell Expansion via Simultaneous Suppression of Cdkn1a and Cdkn2a |
| GSE56875 |
Gene expression profiles of mouse embryonic fibroblasts (MEFs), induced cardiomyocytes (iCMs) and heart |
| GSE56913 |
Gene expression profiles of induced cardiomyocytes(iCMs) |
| GSE58170 |
Separation of mouse ES cell-derived mesodermal cells based on the expression of Flk1, PDGFRa and CAR. |
| GSE60278 |
Expression profile of genes in CAMDI knockout mice brain compared with wild-type mice |
| GSE61096 |
Transcriptional Program of Kpna2 (Importin-α2) Regulates Cellular Differentiation-Coupled Circadian Clock Development in Mammalian Cells |
| GSE66480 |
Mouse intestinal crypt epithelial cells: Apc+/Δ716 mice vs. Apc+/Δ716 Id2-/- compound mutant mice |
| GSE72235 |
Mouse bone marrow stromal cells: before or after total body irradiation |
| GSE72768 |
Genes that are differentially expressed by 5AZA treatment and DNMT1 knockdown in intestinal tumor organoid |
| GSE72849 |
Expression profiles of contsh- and Eva1sh-expressing NSCL61 |
| GSE73839 |
Cardiac reprogramming under defined conditions |
| GSE73943 |
MMP-14 deficient vs wild-type E14 Dlk+ cells and MMP-14 deficient vs wild-type P1 liver |
| GSE75558 |
Role of Sirt1 in cardiomyocytes in the development of caloric restriction-induced cardioprotection |
| GSE76366 |
Gene expression profiling of endothelial cells derived from Foxo1(+/+) and Foxo1(-/-) ES cells in response to VEGF |
| GSE78112 |
Gene expression profile of AU019823-gene-trapped early mesodermal cells and their revertant cells |
| GSE78825 |
JAK inhibitor has the amelioration effect in lupus-prone mice: the involvement of IFN signature gene downregulation. |
| GSE81315 |
Gene expression profile of colonic Atoh1+ve cells and their descendants in DSS-colitis mice |
| GSE81451 |
Gene expression profile of intestinal stem cells (ISCs) and ATOH1+ve cells in mice |
| GSE82231 |
Tet-Gabpα cKO ES cells: -Tet vs. +Tet |
| GSE86275 |
Immunoglobulin class-switch recombination downregulates Blimp1-driven IL-10 production in IgM+CD138hi cells |
| GSE88923 |
Gene expression data of QRsP-11 mouse fibrosarcoma cell line and its liver metastatic subline |
| GSE88924 |
Gene expression profile of cardiac macrophages at different timepoints after myocardial infarction |
| GSE89820 |
Cardiac mesoderm induction by Tbx6 without exogenous factors |
| GSE99387 |
Gene expression profile of Dclk1+ murine normal intestinal and tumor cells |
| GSE101578 |
Gene expression profiles of mouse embryonic fibroblasts (MEFs), induced cardiomyocytes (iCMs) and heart. |
| GSE101861 |
Mouse lung tissue: normal (WT) vs. CF (ENaC-Tg) |
| GSE103031 |
DNA microarray analysis in hippocampus of Wild-type (WT), AtrxΔE2, and 5-aminolevulinic acid (5-ALA) treated AtrxΔE2 mice. |
| GSE103032 |
DNA microarray analysis in hippocampus of Wild-type (WT), AtrxΔE2, and TMPyP4-treated AtrxΔE2 mice. |
| GSE103333 |
Muscle-specific gene Zmynd17/Mss51 controls mitochondrial quality and whole body metabolism |
| GSE103634 |
4week organoid VS 54week organoid |
| GSE112355 |
Mice heart: wild-type mice vs. alpha MHC/mir-143/145 transgenic mice |
| GSE120749 |
Gene expression profiles of Ecrg4-wt, -hetero and -homo NSCs |
| GSE124806 |
Dopamine D2L Receptor Deficiency Causes Stress Vulnerability through 5-HT1A Receptor Dysfunction in Serotonergic Neurons |
| GSE130018 |
Gene expression in quiescent NSCs (qNSCs) after bafilomycin A (BafA) treatment |
| GSE188618 |
Gene expression data from murine lung cells of C57BL6JJcl and Mayumi-Emphysema mouse |
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| Data table header descriptions |
| ID |
|
| Ensembl_Gene_ID |
Ensembl_Gene_ID |
| Gene_Symbol |
Gene_Symbol |
| GB_LIST |
RefSeq_ID |
| description |
description |
| ORF |
Ensembl identifier |
| SPOT_ID |
spot identifier |
| Data table |
| ID |
Ensembl_Gene_ID |
Gene_Symbol |
GB_LIST |
description |
ORF |
SPOT_ID |
| M200002096 |
ENSMUSG00000050578 |
Mmp13 |
NM_008607 |
matrix metallopeptidase 13 [Source:MarkerSymbol;Acc:MGI:1340026] |
|
|
| M200001931 |
ENSMUSG00000021779 |
Thrb |
NM_009380 |
thyroid hormone receptor beta [Source:MarkerSymbol;Acc:MGI:98743] |
|
|
| M200001904 |
ENSMUSG00000022996 |
Wnt10b |
NM_011718 |
wingless related MMTV integration site 10b [Source:MarkerSymbol;Acc:MGI:108061] |
|
|
| M200001756 |
ENSMUSG00000022436 |
Sh3bp1 |
NM_009164 |
SH3-domain binding protein 1 [Source:MarkerSymbol;Acc:MGI:104603] |
|
|
| M200001725 |
ENSMUSG00000017737 |
Mmp9 |
NM_013599 |
matrix metallopeptidase 9 [Source:MarkerSymbol;Acc:MGI:97011] |
|
|
| M200001568 |
ENSMUSG00000028329 |
Xpa |
NM_011728 |
xeroderma pigmentosum, complementation group A [Source:MarkerSymbol;Acc:MGI:99135] |
|
|
| M200001543 |
ENSMUSG00000001829 |
Clpb |
NM_009191 |
ClpB caseinolytic peptidase B homolog (E. coli) [Source:MarkerSymbol;Acc:MGI:1100517] |
|
|
| M200001385 |
ENSMUSG00000005354 |
Txn2 |
NM_019913 |
thioredoxin 2 [Source:MarkerSymbol;Acc:MGI:1929468] |
|
|
| M200001360 |
ENSMUSG00000015994 |
Fnta |
NM_008033 |
farnesyltransferase, CAAX box, alpha [Source:MarkerSymbol;Acc:MGI:104683] |
|
|
| M200001195 |
ENSMUSG00000014542 |
Clec4f |
NM_016751 |
C-type lectin domain family 4, member f [Source:MarkerSymbol;Acc:MGI:1859834] |
|
|
| M200001174 |
ENSMUSG00000056917 |
Sipa1 |
NM_011379 |
signal-induced proliferation associated gene 1 [Source:MarkerSymbol;Acc:MGI:107576] |
|
|
| M200001020 |
ENSMUSG00000020346 |
Mgat1 |
|
mannoside acetylglucosaminyltransferase 1 [Source:MarkerSymbol;Acc:MGI:96973] |
ENSMUSG00000020346 |
|
| M200001005 |
ENSMUSG00000022283 |
Pabpc1 |
NM_008774 |
poly A binding protein, cytoplasmic 1 [Source:MarkerSymbol;Acc:MGI:1349722] |
|
|
| M200000844 |
ENSMUSG00000017897 |
Eya2 |
NM_010165 |
eyes absent 2 homolog (Drosophila) [Source:MarkerSymbol;Acc:MGI:109341] |
|
|
| M200000824 |
ENSMUSG00000019841 |
Rev3l |
NM_011264 |
REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1337131] |
|
|
| M200000665 |
ENSMUSG00000057092 |
Fxyd3 |
NM_008557 |
FXYD domain-containing ion transport regulator 3 [Source:MarkerSymbol;Acc:MGI:107497] |
|
|
| M200000650 |
ENSMUSG00000042340 |
Ctf1 |
NM_007795 |
cardiotrophin 1 [Source:MarkerSymbol;Acc:MGI:105115] |
|
|
| M200000488 |
ENSMUSG00000020383 |
Il13 |
NM_008355 |
interleukin 13 [Source:MarkerSymbol;Acc:MGI:96541] |
|
|
| M200000463 |
ENSMUSG00000000028 |
Cdc45l |
NM_009862 |
cell division cycle 45 homolog (S. cerevisiae)-like [Source:MarkerSymbol;Acc:MGI:1338073] |
|
|
| M200000317 |
ENSMUSG00000018973 |
Hoxb1 |
NM_008266 |
homeo box B1 [Source:MarkerSymbol;Acc:MGI:96182] |
|
|
Total number of rows: 23473
Table truncated, full table size 2464 Kbytes.
| Supplementary data files not provided |
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