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Platform GPL5722 Query DataSets for GPL5722
Status Public on Aug 09, 2007
Title Affymetrix Mus musculus 4K chromosome 11 and 16 CustomExpress Array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol We designed a GeneChip CustomExpress array that contained all of the 4019 chromosome 11 and 16 mouse probe sets currently arrayed by Affymetrix (Santa Clara, CA) as well as an additional 70 sequences for which unique probe sets were designed. These 70 unique probe sets covered potential gene products located near the previously identified transgene insertion and translocation points on chromosomes 11 and 16. This custom array was designated Chr11/16.
Submission date Aug 07, 2007
Last update date Aug 09, 2007
Contact name Kirk M McHugh
Phone 614-355-2817
Organization name Columbus Children's Hospital
Department Cell & Developmental Biology
Street address 700 Children's Drive
City Columbus
State/province OH
ZIP/Postal code 43205
Country USA
Samples (30) GSM215770, GSM215771, GSM215772, GSM215773, GSM215774, GSM215775 
Series (1)
GSE8715 Transcriptional Profiling of the Megabladder Mouse - A Unique Model of Bladder Dysmorphogenesis

Data table header descriptions
CHR chromosome
LOC location
GB_ACC GenBank accession

Data table
1419226_at chr16 45991870 Cd96 Cd96
1447785_x_at chr11 113334041 D11Wsu99e D11Wsu99e
1440480_at chr11 6495820 D230024G13Rik D230024G13Rik
1441035_at chr16 92811703 Kcne1 Kcne1
ENSMUST00000066852_at chr16 27149679 ostn ostn
1458347_s_at chr16 98364357 Tmprss2 Tmprss2
1420523_at chr16 27231332 LOC277707 LOC277707
1453540_at chr16 45718114 5430404G13Rik 5430404G13Rik
1442582_at chr16 45576230 Gcet2 Gcet2
1431755_a_at chr11 97421994 1300013D05Rik 1300013D05Rik
1449698_at chr16 48927782 C330027C09Rik C330027C09Rik
1431072_a_at chr16 27231252 2610529H08Rik 2610529H08Rik
1420522_at chr16 27231332 2610529H08Rik 2610529H08Rik
1430658_a_at chr11 98317885 2210006M16Rik 2210006M16Rik
1449497_at chr11 44039797 Il12b Il12b
1455766_at chr11 41770673 Gabra1 Gabra1
1450751_at chr11 11177287 Zpbp Zpbp
1417859_at chr11 67215652 Gas7 Gas7
1433311_at chr16 45074859 D530031A16Rik D530031A16Rik
1433995_s_at chr16 27291092 D16Bwg1543e D16Bwg1543e

Total number of rows: 4019

Table truncated, full table size 314 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL5722.CDF.gz 1.2 Mb (ftp)(http) CDF

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