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Platform GPL6456 Query DataSets for GPL6456
Status Public on Mar 31, 2008
Title Affymetrix GeneChip Mouse Genome 430 2.0 Array [CDF: Mm_UNIGENEG_8]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol This array is identical to GPL1261 but a custom, remapped CDF environment is used to extract data. This is version 8 of the remapped CDF. The CDF for various platforms can be found at the link below.
Description CDF file was created by Microarray Lab at the Molecular and Behavioral Neuroscience Institute at the University of Michigan. For the CDF file based on Unigene: A probe must hit only one genomic location; Probes that can be mapped to the same target sequence in the correct direction are grouped together in the same probe set;Each probe set must contain at least three oligonucleotide probes and probes in a set are ordered according to their location in the corresponding exon.
Web link
Contributor(s) Zschiedrich I
Submission date Feb 05, 2008
Last update date Mar 31, 2008
Contact name Inka Zschiedrich
Organization name German Cancer Research Center Heidelberg
Department Molecular Metabolic Control
Lab Molecular Metabolic Control
Street address Im NeuenheimerFeld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
Samples (6) GSM262529, GSM262530, GSM262531, GSM262532, GSM262533, GSM262534
Series (1)
GSE10386 Co-activator function of RIP140 for NFκB/p65-dependent cytokine gene
Alternative to GPL1261 (Alternative CDF [official])

Data table header descriptions
Gene Description Gene description
Gene_Symbol GeneSymbol
ORF Ensembl_Gene_ID
ORF Entrez_Gene_ID
AffyID AffyID
SPOT_ID spot identifier

Data table
ID Gene Description Gene_Symbol ORF ORF AffyID SPOT_ID
Mm.1 S100 calcium binding protein A10 (calpactin) S100a10 ENSMUSG00000041959 20194 1416762_at
Mm.10 spermidine synthase Srm ENSMUSG00000006442 20810 1421260_a_at
Mm.100043 glucokinase regulatory protein Gckr ENSMUSG00000059434 231103 1426059_at
Mm.100065 RIKEN cDNA 1300012G16 gene 1300012G16Rik ENSMUSG00000029598 71772 1423425_at
Mm.100068 angiomotin Amot ENSMUSG00000041688 27494 1425907_s_at
Mm.100084 --UNKNOWN
Mm.100092 --UNKNOWN
Mm.1001 placental protein 11 related Pp11r ENSMUSG00000022468 19011 1449937_at
Mm.100110 RIKEN cDNA 9130015A21 gene 9130015A21Rik 71581 1453953_at
Mm.100112 bromodomain and WD repeat domain containing 3 Brwd3 382236 1439775_at
Mm.100116 ZXD family zinc finger C Zxdc ENSMUSG00000034430 80292 1417158_at
Mm.100117 RIKEN cDNA 5730406M06 gene 5730406M06Rik ENSMUSG00000028248 66625 1429537_at
Mm.100125 SH3 domain binding glutamic acid-rich protein like 2 Sh3bgrl2 ENSMUSG00000032261 212531 1434109_at
Mm.100144 S100 calcium binding protein A6 (calcyclin) S100a6 ENSMUSG00000001025 20200 1421375_a_at
Mm.100163 insulin-like 5 Insl5 ENSMUSG00000066090 23919 1449493_at
Mm.100167 phosphodiesterase 8B Pde8b ENSMUSG00000021684 218461 1435741_at
Mm.100168 glycine/arginine rich protein 1 Grrp1 ENSMUSG00000050105 72690 1429843_at
Mm.100172 RIKEN cDNA 8430416G17 gene 8430416G17Rik 71469 1430975_at
Mm.100187 solute carrier family 26, member 4 Slc26a4 23985 1419725_at
Mm.10025 FK506 binding protein-like Fkbpl ENSMUSG00000033739 56299 1422787_at

Total number of rows: 18127

Table truncated, full table size 1369 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6456_mm430mmug8cdf_8.0.0.tar.gz 2.0 Mb (ftp)(http) TAR

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