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Platform GPL6748 Query DataSets for GPL6748
Status Public on May 14, 2009
Title Texas A&M Brucella melitensis 8K
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Brucella melitensis
Manufacturer Western Regional Center of Excellence (WRCE) Pathogen Expression Core (Arizona State University)
Manufacture protocol A set of unique 70-base oligonucleotides representing 3,227 ORFs of B. melitensis strain 16M and unique / divergent genes from B. abortus and B. suis were designed at the Pathogen Expression Core and purchased from Sigma-Genosys (The Woodland, TX). Oligonucleotides were suspended in 3X SSC (Ambion) at the final concentration of 40 uM before robotic arraying in triplicate onto ultraGAPS coated glass slides (Corning) using a Spotarray 72 microarray printer (Perkin Elmer, Downer’s Grove, ILL). Printed slides were steamed and UV cross-linked and stored in a desiccators until use.
 
 
Contributor(s) Johnston SA, McGee M, Friedberg R
Submission date Apr 16, 2008
Last update date May 14, 2009
Contact name Leslie Garry Adams
E-mail(s) gadams@cvm.tamu.edu
Phone 979-845-9816
Organization name Texas A&M University
Department Veterinary Pathobiology
Lab L. Garry Adams Lab
Street address 402 Raymond Stotzer Blvd.
City College Station
State/province TX
ZIP/Postal code 77843-4467
Country USA
 
Samples (8) GSM281917, GSM281918, GSM281919, GSM281920, GSM281921, GSM281922 
Series (1)
GSE11192 Brucella melitensis global gene expression

Data table header descriptions
ID Unique Identifier
Block Array Block
Column Block Column
Row Block Row
Name Oligo number
ORF Brucella melitensis gene number
System name Protein database accession number
GI GenInfo Identifier
ORF Entrez Gene Database identifier
Product Gene Product Name
Description Gene product function

Data table
ID Block Column Row Name ORF System name GI ORF Product Description
9725 45 1 1 68754-001 BMEI0001 NP_538919.1 17986285 1195727 uroporphyrinogen decarboxylase Catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
9726 45 2 1 68754-001 BMEI0001 NP_538919.1 17986285 1195727 uroporphyrinogen decarboxylase Catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
9727 45 3 1 68754-001 BMEI0001 NP_538919.1 17986285 1195727 uroporphyrinogen decarboxylase Catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
10167 47 1 1 68754-002 BMEI0002 NP_538920.1 17986286 1195713 CYTOCHROME FUNCTIONING/ASSEMBLY RELATED PROTEIN
10168 47 2 1 68754-002 BMEI0002 NP_538920.1 17986286 1195713 CYTOCHROME FUNCTIONING/ASSEMBLY RELATED PROTEIN
10169 47 3 1 68754-002 BMEI0002 NP_538920.1 17986286 1195713 CYTOCHROME FUNCTIONING/ASSEMBLY RELATED PROTEIN
9737 45 13 1 68754-005 BMEI0005 NP_538923.1 17986289 1195716 THYMIDYLATE KINASE
9738 45 14 1 68754-005 BMEI0005 NP_538923.1 17986289 1195716 THYMIDYLATE KINASE
9739 45 15 1 68754-005 BMEI0005 NP_538923.1 17986289 1195716 THYMIDYLATE KINASE
9743 45 2 2 68754-007 BMEI0007 NP_538925.1 17986291 1195718 glucose-inhibited division protein A "GidA; possibly involved in cell division, potential global regulator and modulator of gene expression during translation"
9744 45 3 2 68754-007 BMEI0007 NP_538925.1 17986291 1195718 glucose-inhibited division protein A "GidA; possibly involved in cell division, potential global regulator and modulator of gene expression during translation"
9745 45 4 2 68754-007 BMEI0007 NP_538925.1 17986291 1195718 glucose-inhibited division protein A "GidA; possibly involved in cell division, potential global regulator and modulator of gene expression during translation"
10185 47 2 2 68754-008 BMEI0008 NP_538926.1 17986292 1195719 glucose-inhibited division protein B probable SAM-dependent methyltransferase
10186 47 3 2 68754-008 BMEI0008 NP_538926.1 17986292 1195719 glucose-inhibited division protein B probable SAM-dependent methyltransferase
10187 47 4 2 68754-008 BMEI0008 NP_538926.1 17986292 1195719 glucose-inhibited division protein B probable SAM-dependent methyltransferase
7957 37 1 1 68754-009 BMEI0009 NP_538927.1 17986293 1195720 CHROMOSOME PARTITIONING PROTEIN PARA
7958 37 2 1 68754-009 BMEI0009 NP_538927.1 17986293 1195720 CHROMOSOME PARTITIONING PROTEIN PARA
7959 37 3 1 68754-009 BMEI0009 NP_538927.1 17986293 1195720 CHROMOSOME PARTITIONING PROTEIN PARA
8399 39 1 1 68754-010 BMEI0010 NP_538928.1 17986294 1195721 CHROMOSOME PARTITIONING PROTEIN PARB
8400 39 2 1 68754-010 BMEI0010 NP_538928.1 17986294 1195721 CHROMOSOME PARTITIONING PROTEIN PARB

Total number of rows: 8658

Table truncated, full table size 916 Kbytes.




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