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Platform GPL7635 Query DataSets for GPL7635
Status Public on Feb 01, 2009
Title Mouse Genome 430 2.0 Array [ENSG build 46 (v10) CDF]
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer Affymetrix
Manufacture protocol This is identical to GPL1261 but a custom cdf environment was used to extract data. We used custom chip definition files (CDF) based on Ensembl gene annotation from build 46 rather than Affymetrix annotation (Dai et al., PMID: 16284200).
 
 
Web link http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/CDF_download.asp
Submission date Nov 13, 2008
Last update date Feb 01, 2009
Contact name Mehmet Somel
E-mail(s) somel@eva.mpg.de
Phone +49-(0)341-3550-530
Fax +49-(0)341-3550-555
Organization name Max Planck Institute for Evolutionary Anthropology
Department Evolutionary Genetics
Street address Deutscher Platz 6
City Leipzig
ZIP/Postal code D-04103
Country Germany
 
Samples (80) GSM341875, GSM341876, GSM341877, GSM341878, GSM341879, GSM341880 
Series (2)
GSE13588 Gene expression in striatums of Foxp2-hum, Foxp2-ko and wild-type mice
GSE37610 Expression in the dorsal telencephalon of E13.5 conditional Dicer KO mice
Relations
Alternative to GPL1261 (Alternative CDF [official])

Data table header descriptions
ID
SPOT_ID Gene identifier
GB_ACC GenBank Accession
ProbeHitCnt
Strand
Length

Data table
ID SPOT_ID GB_ACC ProbeHitCnt Strand Length
ENSMUSG00000000001_at ENSMUSG00000000001 BM240650 17 - 655
ENSMUSG00000000003_at ENSMUSG00000000003 NM_017471 8 + 805
ENSMUSG00000000028_at ENSMUSG00000000028 CO040149 9 - 637
ENSMUSG00000000031_at ENSMUSG00000000031 CK345640 11 - 549
ENSMUSG00000000037_at ENSMUSG00000000037 AK031490 22 + 4845
ENSMUSG00000000049_at ENSMUSG00000000049 AI195745 7 - 522
ENSMUSG00000000056_at ENSMUSG00000000056 BC016090 33 + 4365
ENSMUSG00000000058_at ENSMUSG00000000058 CA890131 11 - 629
ENSMUSG00000000078_at ENSMUSG00000000078 AK151769 45 + 4041
ENSMUSG00000000085_at ENSMUSG00000000085 BM123242 10 - 398
ENSMUSG00000000088_at ENSMUSG00000000088 BM124104 25 - 514
ENSMUSG00000000094_at ENSMUSG00000000094 AB221665 6 + 1659
ENSMUSG00000000103_at ENSMUSG00000000103 M32308 15 + 6705
ENSMUSG00000000120_at ENSMUSG00000000120 AK037248 27 + 3399
ENSMUSG00000000125_at ENSMUSG00000000125 AK161781 11 + 2512
ENSMUSG00000000126_at ENSMUSG00000000126 AB072311 10 + 1106
ENSMUSG00000000127_at ENSMUSG00000000127 BC051249 21 + 1563
ENSMUSG00000000134_at ENSMUSG00000000134 BB768768 11 + 549
ENSMUSG00000000142_at ENSMUSG00000000142 AK084644 22 + 2042
ENSMUSG00000000148_at ENSMUSG00000000148 AK049321 33 + 3024

Total number of rows: 15768

Table truncated, full table size 911 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL7635_Mm430_Mm_ENSG.cdf.gz 6.7 Mb (ftp)(http) CDF
GPL7635_Mm430_Mm_ENSG_probe_tab.txt.gz 3.7 Mb (ftp)(http) TXT

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