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Platform GPL8580 Query DataSets for GPL8580
Status Public on May 22, 2009
Title CCF Human ISG v.1.3.2
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Bryan RG Williams lab, Cleveland Clinic Foundation
Manufacture protocol ISG cDNA microarray was generated from a list of ISGs compiled from previous array experiments in our laboratory and others. Housekeeping genes and bacterial control genes were also included for standardization or normalization purposes. cDNA for genes was obtained, and arrays were printed as previously reported in Frevel MA, Bakheet T, Silva AM, Hissong JG, Khabar KS, Williams BR. p38 mitogen-activated protein kinase-dependent and-independent signaling of mRNA stability of AU-rich element-containing transcripts. Mol. Cell. Biol. 2003;23:425–436, and Sledz CA, Williams BR. RNA interference and double-stranded-RNA-activated pathways. Biochem. Soc. Trans. 2004;32:952–956.
Support glass
Coating polysine
 
Description Array contains 810 unique putative ISGs, 85 housekeeping genes, and 4 bacterial control genes.
 
Web link http://www.lerner.ccf.org/labs/williams/xchip-html.cgi
Contributor(s) Holko M, Williams BR
Citation(s) 16881864
Submission date May 21, 2009
Last update date May 22, 2009
Contact name Michelle Holko
E-mail(s) holko@ncbi.nlm.nih.gov
Phone (301) 496-5753
Organization name GEO
Department NCBI
Street address 45 Center Dr
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (7) GSM406516, GSM406517, GSM406518, GSM406519, GSM406520, GSM406521 
Series (2)
GSE16196 Differential IFNa-stimulated gene expression profiles in PLZF-inducible U937T monocyte cells
GSE16197 Transcription Factor Promyelocytic Leukemia Zinc Finger Protein regulates Interferon Stimulated Gene expression

Data table header descriptions
ID Unique Identifier
GB_ACC GenBank Accession
GENE SYMBOL HUGO Gene Symbol
SPOT_ID Spot Type

Data table
ID GB_ACC GENE SYMBOL SPOT_ID
ISG_03L02 AA004638 RPL4
ISG_02N23 AA004759 DPM1
ISG_03A02 AA005219 GPD2
ISG_02P20 AA007509 TTC3
ISG_01A11 AA010079 PRKR
ISG_01F14 AA010352 IFNAR1
ISG_02N14 AA010781 DCLRE1A
ISG_01A07 AA011215 SAT
ISG_01L11 AA012867 ARF6
ISG_01J03 AA017175 LIG1
ISG_02O08 AA017544 RGS1
ISG_02K23 AA019316 P51
ISG_02O24 AA025807 HSPE1
ISG_01L12 AA026686 FLJ40432
ISG_02G16 AA027240 IDH2
ISG_02G17 AA029241 LIG3
ISG_01L14 AA035455 SCYA5
ISG_01G14 AA036881 CCR1
ISG_01N10 AA040332 TIF1B
ISG_02F24 AA041388 DSG1

Total number of rows: 1536

Table truncated, full table size 36 Kbytes.




Download family Format
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Supplementary data files not provided

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