NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL8600 Query DataSets for GPL8600
Status Public on May 31, 2010
Title BMFZ Mouse 40K V.1 part 2
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Mus musculus
Manufacturer BMFZ Heinrich Heine University Düsseldorf
Manufacture protocol 1. Oligos are purchased from Operon (AROS Mus Musculus V.4.0, plate 49-95 + control plate and buffer plate) arrayed in Genetix V-bottom 384-well plates. Each well contains 300 pmol of 70-mer oligo.
2. A day before printing oligos were resuspend in 15 µl Amino-Spotting-Buffer ((Genetix Ltd., Hampshire, UK)
3. Centrifuge plates at 1000 rpm for 5 minutes.
4. Plates were sealed and store at 8°C over night
5. Centrifuge plates at 1000 rpm for 5 minutes.
6. Remove seals and cover with plate lids. Place in appropriate location of plate cassette.
7. After the print run is completed, allow plates to dry through passive evaporation in a protected environment.
8. For each subsequent preparation of these plates for a print run, add water to the wells instead of spotting buffer. The amount of water should be decreased by 0.5 µL per print run, as this is the amount drawn up by the pin capillary during each print run.
Support UltraGap slides (Corning Inc., NY, U.S.A.).
Coating Aminosilane
 
Description spotter = QArray (Genetix)
 
Contributor(s) Mehrens J, Köhrer K
Submission date May 27, 2009
Last update date May 31, 2010
Contact name Antje Lindecke
E-mail(s) antje.lindecke@uni-duesseldorf.de
Phone 49-211-8114367
Organization name Universitaet Duesseldorf
Department BMFZ
Lab Microarray
Street address Universitaetsstr. 1
City Duesseldorf
ZIP/Postal code 40225
Country Germany
 
Samples (16) GSM409081, GSM409082, GSM409083, GSM409084, GSM409085, GSM409086 
Series (1)
GSE16246 Analysis of cardiac gene expression in response to isoproterenol-induced heart failure (part 2)

Data table header descriptions
ID
GENE SYMBOL GENE SYMBOL
DESCRIPTION DESCRIPTION
ENSEMBL GENE ID ENSEMBL GENE ID
GB_LIST GB_LIST
SEQUENCE SEQUENCE
SPOT_ID SPOT IDENTIFIERS

Data table
ID GENE SYMBOL DESCRIPTION ENSEMBL GENE ID GB_LIST SEQUENCE SPOT_ID
18433 BLANK
18434 Tcte3 T complex testis-specific protein 2 (TCTEX-2). [Source:Uniprot/SWISSPROT;Acc:P11985] ENSMUSG00000036648 DQ072384, DQ072383, BC061136, AY172988, AC173477 GGATCTGGGATGTGGCATGGGACAACTGGGTAGAAGCTAAACATGAAACAGAGTCTTACGTGGTATTGGC
18435 Colec11 ENSMUSG00000036655 AC165283 CCGAGTCTTCATCGGTATCAATGACCTGGAGAAAGAAGGTGCTTTCGTGTACTCGGACCGCTCCCCCATG
18436 Eif2c2 Eukaryotic translation initiation factor 2C 2 (eIF2C 2) (eIF-2C 2) (Piwi/argonaute family protain meIF2C2). [Source:Uniprot/SWISSPROT;Acc:Q8CJG0] ENSMUSG00000036698 AC118640, BC056639, BC024857, AY135688, AB081472, AK220193, AC161581, BC096465, BC064741 CCACACAGTGCGTCCAGATGAAGAACGTGCAGAGGACCACGCCACAGACCCTATCCAATCTCTGCTTAAA
18437 Cab39 MO25 protein. [Source:Uniprot/SWISSPROT;Acc:Q06138] ENSMUSG00000036707 AC107707, BC029053, AC147513 AAAGAAAAAGAACCAATCCCTTGTATTCAGTTACCCAATGGGGCGCCGTTGGCAGGCAGAACTACATACC
18438 Q8C3J1 ENSMUSG00000036713 AC105301, AC091254, AC090656 AAAGAGTAGACCAAAGCTGCACCATCAAGGATGACTACCACTCCTATAGAGACTCCCTACCAGCTGCATG
18439 ENSMUSG00000036718 AC167333 GTTTGGTGGCTTAGCTCTCAGGATCCATAGTCCTCTATGGGTCTTCATCTACTGCCCCTATGTGGCTGTG
18440 ENSMUSG00000036734 AATGAAAAAGAACCCAGGACGCACTGCTAAGATCAGGGGTCTAAGAAGACGCAGAAAAGAAAATGCCGAT ENSMUSG00000036734
18441 Pramel4 preferentially expressed antigen in melanoma like 5. [Source:RefSeq;Acc:NM_001001319] ENSMUSG00000036749 AC118466, BC052827, AL627131 AGGTCTCTGTTTCATTCTCCCTGCAGATGGCATCCACCTTTTTGCTCTCCCCTTACTGTTCTACAGTATA
18442 ENSMUSG00000036760 AC118008, DQ185133, AC161195 ATTCCTGACCATGAATACCGATGAGGAGCTACTGGAGGGAGAAGTTGCGGAGATTCTTGCTGGAAATCCA
18443 ENSMUSG00000036787 ACAAGTGTCCTTGGTTATAAACTACGATCTACCTAATCGTGAAAACTATATTCACAGGAAGGGTGTGGCT ENSMUSG00000036787
18444 PEN2_MOUSE Gamma-secretase subunit PEN-2 (Presenilin enhancer protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9CQR7] ENSMUSG00000036835 BC081443, BC024347, AL833775, AL626769, AC167978, AC167970, AC149609 TAACAACTTCATAAGCTGCTGATCTGTTCTTTCTCCCAGGATGAAGGCTTCTCTGCTCTAGGCTTTCCCT
18445 ENSMUSG00000036842 AAACTTTGAGGCAGTGCTATGGAATGTGGTGTGTGGATCATGGGACAAATCCTGGGAACTCAAGTGGTTG ENSMUSG00000036842
18446 ENSMUSG00000036842 AL731647 AGTGCTATGGGGAAAATGTGGTGTGTGGATCATGGGACAAAATCTTCCTGGGAACTCAAGTGGTTGGTTT
18447 ENSMUSG00000036842 AL731647 GAAGCTGTGCAGTAAAGGCCAGCCCAAGTTGAAGAATATTCCTGACTCAGCCAAAGAGGCCAGGTTGAAG
18448 RIKEN cDNA 1810054G18; antolefinine. [Source:RefSeq;Acc:NM_029377] ENSMUSG00000036845 BC013546, AY428767 AATTCCATCCCCACTGCAGCCTGAGACCGAGGGTACCCCCGATGATGAACCTTCCGAGCCTGAACCTTCT
18449 ENSMUSG00000036849 GGATTCCAGGCCGAAGTTCCTTGGGCTGTTAGGTTACAGCAGAGAGGAACTTCAGAAGAAGGTGAGTATA ENSMUSG00000036849
18450 pre T-cell antigen receptor alpha. [Source:RefSeq;Acc:NM_011195] ENSMUSG00000036858 CT030702 ACTGTGGCTGAGCCTACTGCGCCTGCTCCTCTTCAAACTGCTTCTGCTCGATGTGCTCCTGACCTGCAGC
18451 H2-Bl H-2 class I histocompatibility antigen, D-B alpha chain precursor (H- 2D(B)). [Source:Uniprot/SWISSPROT;Acc:P01899] ENSMUSG00000036861 CTGCAGCTCCTCACTTCCACACTGAGAATAATAATTTGAATGTGGGTGGCTGGAGAGATGGCTCAGCGCT ENSMUSG00000036861
18452 H2-Bl H-2 class I histocompatibility antigen, D-B alpha chain precursor (H- 2D(B)). [Source:Uniprot/SWISSPROT;Acc:P01899] ENSMUSG00000036861 TCACCTTCATTTCCTGTACCTGTCCTTCCCAGAGCCTCCTCCGTCCACTG ENSMUSG00000036861

Total number of rows: 18816

Table truncated, full table size 2375 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap