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Platform GPL875 Query DataSets for GPL875
Status Public on Jan 02, 2004
Title Agilent Human 1 cDNA Microarray (G4100A) [layout A]
Technology type spotted DNA/cDNA
Distribution commercial
Organism Homo sapiens
Manufacturer Agilent
Manufacture protocol see manufacturer's web site
 
Description 12,814 unique clones, 97% map to named human genes
Sourced from Incyte's UniGene 1 and Human Drug Target DNA clone sets
Barcode location:Bottom
Scan Side:Front

This platform should be used for the following prints:

000437_D_20030121_FSPortraitBcodeDown
000437_D_20010620_FSPortraitBcodeDown

Please reference this platform if you used an array with the same layout, even if the print lot is different than specified above. The GEO staff will update the description of this platform to include additional print lots as encountered.

Print-specific information should be accounted for in the sample hybridization tables (eg. NULL value insertions for spots to be ignored).

 
Submission date Jan 02, 2004
Last update date Oct 28, 2010
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (20) GSM18502, GSM18503, GSM18504, GSM18505, GSM18507, GSM18509 
Series (3)
GSE1128 PDGF-induced genes regulated by the PI3K and MEK/ERK signaling pathways
GSE1299 Breast Cancer Cell Line Experiment
GSE7785 PANC-1 cell differentiation

Data table header descriptions
ID feature number
ROW row
COL column
Probe Id Agilent probe name
GB_ACC GenBank accession and systematic name
PRIMARY_NAME primary name
CONTROL_TYPE_1 000437_D_20030121_FSPortraitBcodeDown
UNIGENE UniGene ID
CONTROL_TYPE_2 000437_D_20010620_FSPortraitBcodeDown
PT_ACC
SPOT_ID

Data table
ID ROW COL Probe Id GB_ACC PRIMARY_NAME CONTROL_TYPE_1 UNIGENE CONTROL_TYPE_2 PT_ACC SPOT_ID
1 156 119 PF500fid PF500fid positive positive --positive
2 155 119 2041 AJ245539 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5) FALSE 55968 FALSE
3 154 119 223436 AB029037 trophinin FALSE 259802 FALSE
4 153 119 407061 AF052432 katanin p80 (WD40-containing) subunit B 1 ignore 275675 ignore
5 152 119 450856 AX011712 Sequence 110 from Patent WO9955858. FALSE FALSE
6 151 119 30690 U11050 NIMA (never in mitosis gene a)-related kinase 2 FALSE 153704 FALSE
7 150 119 260902 L14787 zinc finger, X-linked, duplicated A FALSE 159249 FALSE
8 149 119 389324 AJ005791 serine/threonine kinase 16 FALSE 153003 FALSE
9 148 119 144303 D82880 RAS p21 protein activator 2 FALSE 241548 FALSE
10 147 119 1268996 U16954 ALL1-fused gene from chromosome 1q FALSE 75823 FALSE
11 146 119 1512102 D90224 tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kD) FALSE 181097 FALSE
12 145 119 714 AK026571 Homo sapiens cDNA: FLJ22918 fis, clone KAT06627 FALSE 289018 FALSE
13 144 119 209478 S78187 cell division cycle 25B FALSE 153752 FALSE
14 143 119 340503 AL117493 Human mRNA; cDNA DKFZp434A1635 (from clone DKFZp434A1635). FALSE FALSE
15 142 119 2011841 AF006043 phosphoglycerate dehydrogenase FALSE 3343 FALSE
16 141 119 1726138 X63368 heat shock protein, neuronal DNAJ-like 1 ignore 77768 ignore
17 140 119 1288118 D38037 FK506-binding protein 1B (12.6 kD) FALSE 77643 FALSE
18 139 119 400998 Incyte EST FALSE FALSE Incyte EST
19 138 119 29334 D00408 cytochrome P450, subfamily IIIA, polypeptide 7 FALSE 172323 FALSE
20 137 119 1865012 AF176518 f-box and leucine-rich repeat protein 2 FALSE 6092 FALSE

Total number of rows: 18564

Table truncated, full table size 1485 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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