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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 13, 2009 |
| Title |
AB SOLiD System 3.0 (Homo sapiens) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Homo sapiens |
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| Submission date |
Oct 13, 2009 |
| Last update date |
Dec 26, 2012 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (360)
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GSM461684, GSM499400, GSM515513, GSM515514, GSM515515, GSM515516
GSM515517, GSM515518, GSM631548, GSM631549, GSM631550, GSM631551, GSM631552, GSM631553, GSM631554, GSM631555, GSM631556, GSM631557, GSM631558, GSM631559, GSM638201, GSM638202, GSM638203, GSM638204, GSM653338, GSM653339, GSM659438, GSM659439, GSM659440, GSM659441, GSM659442, GSM672834, GSM672835, GSM678309, GSM678310, GSM700324, GSM758325, GSM775955, GSM775956, GSM810993, GSM810994, GSM817221, GSM817222, GSM817223, GSM817224, GSM817355, GSM817356, GSM817357, GSM854689, GSM854690, GSM866399, GSM866400, GSM866401, GSM866402, GSM866403, GSM866404, GSM866405, GSM866406, GSM866407, GSM866408, GSM866409, GSM866410, GSM866411, GSM866412, GSM866413, GSM866414, GSM866415, GSM866416, GSM866417, GSM866418, GSM866419, GSM866420, GSM866421, GSM866422, GSM866423, GSM866424, GSM866425, GSM866426, GSM866427, GSM866428, GSM866429, GSM866430, GSM866431, GSM866432, GSM866433, GSM866434, GSM866435, GSM866436, GSM866437, GSM866438, GSM866439, GSM866440, GSM866441, GSM866442, GSM866443, GSM866444, GSM866445, GSM866446, GSM866447, GSM866448, GSM866449, GSM871037, GSM871038, GSM871039, GSM871040, GSM871041, GSM871042, GSM871043, GSM871044, GSM871045, GSM873648, GSM873649, GSM873650, GSM907528, GSM907529, GSM907530, GSM907531, GSM907532, GSM907533, GSM907534, GSM907535, GSM907536, GSM907537, GSM907538, GSM907539, GSM907540, GSM907541, GSM907542, GSM907543, GSM907544, GSM907545, GSM907546, GSM907547, GSM907548, GSM907549, GSM907550, GSM907551, GSM907552, GSM907553, GSM907554, GSM907555, GSM907556, GSM907557, GSM907558, GSM907559, GSM907560, GSM907561, GSM907562, GSM907563, GSM907564, GSM907565, GSM907566, GSM907567, GSM907568, GSM907569, GSM907570, GSM907571, GSM907572, GSM907573, GSM907574, GSM907575, GSM907576, GSM907577, GSM907578, GSM907579, GSM907580, GSM907581, GSM907582, GSM920557, GSM920558, GSM967005, GSM1009412, GSM1009413, GSM1009414, GSM1009415, GSM1009416, GSM1009417, GSM1009418, GSM1009419, GSM1009420, GSM1009421, GSM1015762, GSM1015763, GSM1015764, GSM1015765, GSM1015766, GSM1015767, GSM1015768, GSM1015769, GSM1015770, GSM1015771, GSM1015772, GSM1015773, GSM1071796, GSM1071797, GSM1071798, GSM1071799, GSM1071800, GSM1071801, GSM1071802, GSM1071803, GSM1071804, GSM1071805, GSM1102652, GSM1102653, GSM1171564, GSM1171580, GSM1174029, GSM1174030, GSM1174031, GSM1174032, GSM1174033, GSM1174034, GSM1174035, GSM1174036, GSM1174037, GSM1174038, GSM1174039, GSM1174040, GSM1174041, GSM1174922, GSM1174923, GSM1174924, GSM1174925, GSM1174926, GSM1174927, GSM1174928, GSM1174929, GSM1195956, GSM1195958, GSM1195959, GSM1195960, GSM1195961, GSM1195962, GSM1212198, GSM1212199, GSM1212200, GSM1212201, GSM1212202, GSM1212203, GSM1212204, GSM1212205, GSM1212206, GSM1212207, GSM1245589, GSM1245590, GSM1245592, GSM1245595, GSM1280529, GSM1280530, GSM1280531, GSM1291156, GSM1291157, GSM1291158, GSM1291159, GSM1291160, GSM1291161, GSM1291162, GSM1291163, GSM1291164, GSM1291165, GSM1291166, GSM1291167, GSM1291168, GSM1291169, GSM1291170, GSM1291171, GSM1291172, GSM1328919, GSM1330708, GSM1330709, GSM1330710, GSM1330711, GSM1330712, GSM1330713, GSM1330714, GSM1330715, GSM1330716, GSM1330717, GSM1330718, GSM1330719, GSM1359790, GSM1359791, GSM1359792, GSM1359793, GSM1359794, GSM1359795, GSM1359796, GSM1359797, GSM1359798, GSM1359799, GSM1359800, GSM1359801, GSM1359802, GSM1359803, GSM1359804, GSM1359805, GSM1359806, GSM1359807, GSM1359808, GSM1359809, GSM1359810, GSM1359811, GSM1359812, GSM1359813, GSM1359814, GSM1359815, GSM1359816, GSM1359817, GSM1359818, GSM1410327, GSM1410328, GSM1527022, GSM1527023, GSM1527024, GSM1527025, GSM1527026, GSM1527027, GSM1527028, GSM1527029, GSM1527030, GSM1527031, GSM1622035, GSM1622036, GSM1622037, GSM1622038, GSM1622039, GSM1622040, GSM1622041, GSM1622042, GSM1622043, GSM1622044, GSM1622045, GSM1622046, GSM1649543, GSM1649544, GSM1938086, GSM1938087, GSM1938088, GSM1938089, GSM2140851, GSM2140852, GSM2140853, GSM2140854, GSM2140855, GSM2140856, GSM2140857, GSM2236617, GSM2236618, GSM2309221, GSM2309222, GSM2309223, GSM2309224, GSM2309225, GSM2913115, GSM2913116, GSM4609652, GSM4609653, GSM4609654, GSM4609655
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| Series (56)
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| GSE18542 |
Highly efficient genomic enrichment of human exonic sequences through short-fragment libraries |
| GSE19986 |
U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line |
| GSE20116 |
RNA-Seq of oral squamous cell carcinomas and matched normal tissues |
| GSE25715 |
miRNA profiling during adipogenic differentiation of adipose-derived stem cells |
| GSE26005 |
The human TTAGGG Repeat Factors 1 and 2 bind to a subset of interstitial telomeric sequences and satellite repeats |
| GSE26577 |
Ubiquitous expression of long dsRNA in mice causes mainly RNAi effects in the oocyte |
| GSE26811 |
Transcriptomics of a novel trophoblast differentiation protocol applied to human embryonic stem cells |
| GSE27221 |
ENCODE Genome Institute of Singapore RNA-Seq |
| GSE27443 |
RNA-Seq of rRNA depleted circulating endothelial progenitor cells (cEPCs) in trisomy 21 and euploid samples |
| GSE28303 |
An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia |
| GSE30557 |
Transcriptome sequencing to systematically detect trans-splicing in human embryonic stem cells |
| GSE31310 |
A RNA-seq-based gene expression profiling of radiation-induced tumorigenic mammary epithelial cells |
| GSE32673 |
E2F7 represses a transcriptional network of oscillating cell cycle genes to control S-phase progression. |
| GSE32991 |
Dynamic transcriptomes during human erythroid differentiation and development |
| GSE32997 |
Sequencing Apoptotic DNA Breakpoints |
| GSE34759 |
Estrogen-responsive Estrogen Receptor alpha binding sites in MCF-7 by ChIP-seq |
| GSE35342 |
Genome-wide DNA methylation events in TMPRSS2:ERG fusion negative prostate cancers implicate an EZH2 dependent mechanism with miRNA-26a hypermethylation. |
| GSE35573 |
ChIP-seq analysis of H3K4Me3- and H3K27Me3-marked chromatin in mesenchymal stem cells (MSCs), osteoblasts derived from MSCs and the osteosarcoma cell line U2OS |
| GSE35576 |
Gene expression and ChIP-seq analyses of mesenchymal stem cells, osteoblasts and the U2OS osteosarcoma cell line |
| GSE35586 |
Nucleosome Position by MNase-seq from ENCODE/Stanford/BYU |
| GSE35704 |
Whole Transcriptome RNA-seq Analysis: the Tumorigenesis and Metastasis of Melanoma |
| GSE36968 |
AMPKα Modulation in Cancer Progression: Multilayer Integrative Analysis of the Whole Transcriptome in Asian Gastric Cancer |
| GSE39374 |
Transcriptomes of K562 cell line |
| GSE40915 |
Deep sequencing of the small RNA transcriptome of blood leukocytes from Parkinson's disease patients prior to and following deep brain stimulation (DBS) and as compared with healthy control volunteers |
| GSE41154 |
The Cellular EJC Interactome Reveals Higher-Order mRNP Structure and an EJC-SR Protein Nexus |
| GSE42608 |
Whole-transcriptome high-throughput RNA sequencing of blood leukocytes from Parkinson's disease human patients pre- and post-deep brain stimulation |
| GSE43828 |
Investigation of breast cancer-associated mutations in RND1 gene |
| GSE45336 |
Genome-wide methylation and expression analysis of two breast cancer cell lines [Methyl-MAPS] |
| GSE45337 |
Genome-wide methylation and expression analysis of two breast cancer cell lines |
| GSE48166 |
RNA-seq identifies novel transcript elements and transcript processing in the normal and failing hearts |
| GSE48327 |
Global assessment of Antrodia cinnamomea induced microRNA and mRNA transcriptomic alterations in hepatocarcinoma cells |
| GSE48889 |
SnapShot-Seq: a method for extracting genome-wide, in vivo mRNA dynamics from a single total RNA sample |
| GSE49247 |
Gene expression analysis of induced pluripotent stem cells from aneuploid chromosomal syndromes |
| GSE51430 |
Genome sequencing coupled with iPSC technology identifies GTDC1 as a novel candidate gene involved in Neurodevelopmental Disorders |
| GSE53024 |
Architecture of Epigenetic Reprogramming Following Twist1 Mediated Epithelial-Mesenchymal Transition [RNA-seq] |
| GSE53026 |
Architecture of Epigenetic Reprogramming Following Twist1 Mediated Epithelial-Mesenchymal Transition |
| GSE53419 |
The SLE transcriptome exhibits evidence of chronic endotoxin exposure and has widespread dysregulation of non-coding and coding RNAs |
| GSE55058 |
Imperfect centered miRNA binding sites are common and can mediate functional repression of target mRNAs [sequencing] |
| GSE55059 |
Imperfect centered miRNA binding sites are common and can mediate functional repression of target mRNAs |
| GSE55169 |
Pervasive genomic transcription during oxidative stress generates thousands of previously uncharacterized lncRNAs (RNA-Seq) |
| GSE55172 |
Pervasive genomic transcription during oxidative stress generates thousands of previously uncharacterized lncRNAs |
| GSE56354 |
Small-RNA expression in normal and malignant mature B cells |
| GSE58406 |
NOTCH1 ChIP-Seq in HBPALL cell lines |
| GSE62442 |
Androgen receptor DNA binding in response to different ligands across three prostate cancer cell lines |
| GSE62472 |
Cell context specific effect of AR antagonists on AR DNA binding and target gene expression |
| GSE66412 |
RNA-Seq whole transcriptome analysis of normal human epidermal keratinocytes and cutaneous squamous cell carcinoma cell lines. |
| GSE67555 |
TFAP2A ChIP-seq in human primary melanocytes |
| GSE74942 |
Epigenetic activation of the prostaglandin receptor EP4 promotes resistance to endocrine therapy for breast cancer [Methyl-MAPS] |
| GSE74943 |
Epigenetic activation of the prostaglandin receptor EP4 promotes resistance to endocrine therapy for breast cancer |
| GSE81032 |
Comparative proteomics and transcriptomics study of signaling network proteins across multiple normal and cancer cell lines |
| GSE84456 |
Ascl2 acts as an R-spondin/Wnt responsive switch to control stemness in intestinal crypts [ChIP-seq] |
| GSE84457 |
Ascl2 acts as an R-spondin/Wnt responsive switch to control stemness in intestinal crypts |
| GSE86838 |
Genome-wide positioning of bivalent mononucleosomes |
| GSE108773 |
Human SETMAR is a DNA sequence-specific histone-methylase with a broad effect on the transcriptome |
| GSE152230 |
Epigenetic and transcriptional analysis reveals a core transcriptional program conserved in clonal prostate cancer metastases [RNA-seq] |
| GSE152231 |
Epigenetic and transcriptional analysis reveals a core transcriptional program conserved in clonal prostate cancer metastases |
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| Supplementary data files not provided |
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