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Platform GPL968 Query DataSets for GPL968
Status Public on Feb 11, 2004
Title RAT_6K_OligoArray
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Rattus norvegicus
 
Description Spotted 70mer oligonucleotide
The Rat Genome Oligo Set Version 1.1 (Qiagen) contains 5,705 70mer probes representing 5,677 Rattus norvegicus genes plus 24 controls oligonucleotides. The oligo set represents most cloned rat genes and some expressed sequence tags (ESTs).
All probes are designed from the UniGene Database Build Rn 90(Version 1.0), UniGene Database Build Rn 108 (Upgrade), and the Rat RefSeq database, developed and maintained at the National Center of Biotechnology Information (NCBI).

Keywords = spotted
Keywords = 70mer oligonucleotide
 
Contributor(s) Bowman PD, Zhao B
Citation(s) 16159910
Submission date Jan 29, 2004
Last update date Oct 04, 2005
Contact name Phillip Bowman
E-mail(s) phillip.bowman@cen.amedd.army.mil
Phone 210-916-4297
Organization name Institute of Surgical Research
Street address 3400 Rawley E. Chambers Ave
City San Antonio
State/province TX
ZIP/Postal code 78234-6315
Country USA
 
Samples (32) GSM16636, GSM16637, GSM16638, GSM16639, GSM16640, GSM16641 
Series (1)
GSE1034 Temporal Response of Rat Lung to Hemorrhage

Data table header descriptions
ID
BLOCK Print subarray
ROW Row within subarray
COLUMN Column within subarray
GENE_NAME Descriptive gene name
GB_ACC GenBank accession number
SPOT_ID identifier for spots without GB_ACC

Data table
ID BLOCK ROW COLUMN GENE_NAME GB_ACC SPOT_ID
1 1 1 1 Plectin NM_022401
2 1 1 2 Plectin NM_022401
3 1 1 3 Cystatin beta NM_012838
4 1 1 4 Cystatin beta NM_012838
5 1 1 5 RAB7, member RAS oncogene family NM_023950
6 1 1 6 RAB7, member RAS oncogene family NM_023950
7 1 1 7 Heat shock 10 kD protein 1 (chaperonin 10) NM_012966
8 1 1 8 Heat shock 10 kD protein 1 (chaperonin 10) NM_012966
9 1 1 9 ATPase, Na+K+ transporting, alpha 2 NM_012505
10 1 1 10 ATPase, Na+K+ transporting, alpha 2 NM_012505
11 1 1 11 SEC15 homolog (S. cerevisiae) NM_019277
12 1 1 12 SEC15 homolog (S. cerevisiae) NM_019277
13 1 1 13 Phosphoglycerate mutase 1 M76591
14 1 1 14 Phosphoglycerate mutase 1 M76591
15 1 1 15 Nucleobindin AF336828
16 1 1 16 Nucleobindin AF336828
17 1 2 1 Clathrin, light polypeptide (Lcb) M19262
18 1 2 2 Clathrin, light polypeptide (Lcb) M19262
19 1 2 3 Lysophospholipase 1 NM_013006
20 1 2 4 Lysophospholipase 1 NM_013006

Total number of rows: 13056

Table truncated, full table size 835 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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