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Status
Public on Feb 11, 2004
Title
RAT_6K_OligoArray
Technology type
spotted oligonucleotide
Distribution
non-commercial
Organism
Rattus norvegicus
Description
Spotted 70mer oligonucleotide The Rat Genome Oligo Set Version 1.1 (Qiagen) contains 5,705 70mer probes representing 5,677 Rattus norvegicus genes plus 24 controls oligonucleotides. The oligo set represents most cloned rat genes and some expressed sequence tags (ESTs). All probes are designed from the UniGene Database Build Rn 90(Version 1.0), UniGene Database Build Rn 108 (Upgrade), and the Rat RefSeq database, developed and maintained at the National Center of Biotechnology Information (NCBI). Keywords = spotted Keywords = 70mer oligonucleotide
Contributor(s)
Bowman PD , Zhao B
Citation(s)
16159910
Submission date
Jan 29, 2004
Last update date
Oct 04, 2005
Contact name
Phillip Bowman
E-mail(s)
phillip.bowman@cen.amedd.army.mil
Phone
210-916-4297
Organization name
Institute of Surgical Research
Street address
3400 Rawley E. Chambers Ave
City
San Antonio
State/province
TX
ZIP/Postal code
78234-6315
Country
USA
Samples (32)
GSM16636 , GSM16637 , GSM16638 , GSM16639 , GSM16640 , GSM16641
GSM16642 ,
GSM16643 ,
GSM16644 ,
GSM16645 ,
GSM16646 ,
GSM16647 ,
GSM16648 ,
GSM16649 ,
GSM16650 ,
GSM16651 ,
GSM16652 ,
GSM16653 ,
GSM16654 ,
GSM16655 ,
GSM16656 ,
GSM16657 ,
GSM16658 ,
GSM16659 ,
GSM16660 ,
GSM16661 ,
GSM16662 ,
GSM16663 ,
GSM16664 ,
GSM16666 ,
GSM16667 ,
GSM16668
Series (1)
GSE1034
Temporal Response of Rat Lung to Hemorrhage
Data table header descriptions
ID
BLOCK
Print subarray
ROW
Row within subarray
COLUMN
Column within subarray
GENE_NAME
Descriptive gene name
GB_ACC
GenBank accession number
SPOT_ID
identifier for spots without GB_ACC
Data table
ID
BLOCK
ROW
COLUMN
GENE_NAME
GB_ACC
SPOT_ID
1
1
1
1
Plectin
NM_022401
2
1
1
2
Plectin
NM_022401
3
1
1
3
Cystatin beta
NM_012838
4
1
1
4
Cystatin beta
NM_012838
5
1
1
5
RAB7, member RAS oncogene family
NM_023950
6
1
1
6
RAB7, member RAS oncogene family
NM_023950
7
1
1
7
Heat shock 10 kD protein 1 (chaperonin 10)
NM_012966
8
1
1
8
Heat shock 10 kD protein 1 (chaperonin 10)
NM_012966
9
1
1
9
ATPase, Na+K+ transporting, alpha 2
NM_012505
10
1
1
10
ATPase, Na+K+ transporting, alpha 2
NM_012505
11
1
1
11
SEC15 homolog (S. cerevisiae)
NM_019277
12
1
1
12
SEC15 homolog (S. cerevisiae)
NM_019277
13
1
1
13
Phosphoglycerate mutase 1
M76591
14
1
1
14
Phosphoglycerate mutase 1
M76591
15
1
1
15
Nucleobindin
AF336828
16
1
1
16
Nucleobindin
AF336828
17
1
2
1
Clathrin, light polypeptide (Lcb)
M19262
18
1
2
2
Clathrin, light polypeptide (Lcb)
M19262
19
1
2
3
Lysophospholipase 1
NM_013006
20
1
2
4
Lysophospholipase 1
NM_013006
Total number of rows: 13056 Table truncated, full table size 835 Kbytes .
Supplementary data files not provided