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Series GSE101092 Query DataSets for GSE101092
Status Public on Oct 01, 2017
Title RNA Sequencing looking at differential gene expression between p65+/+ and p65-/- mouse embryonic fibroblasts (MEFs)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We look at differential gene expression between immortalized p65+/+ and p65-/- MEFs to identify potential NF-kB regulated genes which when grouped based on biological function indicates candidates involved in protecting p65+/+ cells from macrophage-mediated killing
 
Overall design Examination of differential gene expression between two cell types either in the presence or absence of p65
 
Contributor(s) Guttridge DC, Wang DJ, Ratnam NM
Citation(s) 28891811
Submission date Jul 10, 2017
Last update date May 15, 2019
Contact name Denis Guttridge
E-mail(s) denis.guttridge@osumc.edu
Organization name The Ohio State University
Street address Biomedical Research Tower, 460 West 12th Avenue
City Columbus
ZIP/Postal code 43210
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (2)
GSM2699111 p65 WT MEFs
GSM2699112 p65 null MEFs
Relations
BioProject PRJNA393702
SRA SRP111473

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101092_p65wt_p65null_raw_counts.txt.gz 126.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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