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Series GSE101904 Query DataSets for GSE101904
Status Public on Feb 27, 2018
Title A quantitative chemotherapy genetic interaction map identifies new factors associated with PARP inhibitor resistance
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to understand the gene expression changes in MCF10A cells with GPBP1 knockdown in presence and absence of BMN673.
 
Overall design Examination of RNA expression changes in drug treated and untreated celllines with GPBP1 knockdown
 
Contributor(s) Hu H, Zhao X, Kaushik S, Bandyopadhyay S
Citation(s) 29669295
Submission date Jul 26, 2017
Last update date May 15, 2019
Contact name Sourav Bandyopadhyay
E-mail(s) Sourav.Bandyopadhyay@ucsf.edu
Organization name University of California, San Francisco
Department Helen Diller Family Comprehensive Cancer Center
Lab Bandyopadhyay lab
Street address 1450 3rd Street
City San Francisco
State/province California
ZIP/Postal code 94403
Country USA
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (8)
GSM2718332 siNT4-DMSO-rep1
GSM2718333 siNT4-DMSO-rep2
GSM2718334 siNT4-BMN673-rep1
Relations
BioProject PRJNA395899
SRA SRP113604

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101904_GPBP1-matrix_normalized-counts.txt.gz 1.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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