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Series GSE102146 Query DataSets for GSE102146
Status Public on Jul 20, 2018
Title RIP-sequencing reveals that X-ray irradiation infection ELAVL1 binding RNA sites
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the application of RIP-sequencing technology for high-throughput profiling of ELAVL1 protein on the effect of lncRNA an mRNA in WS1 cells after 5 Gy X-ray irradiation
 
Overall design Examing protein(ELAVL1)-RNA(lncRNA and mRNA) interaction sites in WS1 cell after X-ray irradiation
 
Contributor(s) Zhang S
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 02, 2017
Last update date May 15, 2019
Contact name shuyu zhang
E-mail(s) mathhavs@hotmail.com
Phone 15851417273
Organization name Soochow University
Street address 199 Ren'ai Road
City Suzhou
State/province Jiangsu
ZIP/Postal code 215123
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (4)
GSM2728833 0GY-IGG
GSM2728834 0GY-RIP
GSM2728835 5GY-IGG
This SubSeries is part of SuperSeries:
GSE102147 High throughput sequencing of human fibroblast WS1 cells after 5 Gy X-ray irradiation
Relations
BioProject PRJNA396831
SRA SRP114661

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102146_0GY-RIP_vs_0GY-IGG_1e-6_10_30_peaks.bed.gz 660.5 Kb (ftp)(http) BED
GSE102146_5GY-RIP_vs_5GY-IGG_1e-6_10_30_peaks.bed.gz 504.4 Kb (ftp)(http) BED
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Raw data are available in SRA
Processed data are available on Series record

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