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Series GSE102513 Query DataSets for GSE102513
Status Public on Feb 06, 2018
Title Tacrolimus-induced nephrotoxicity in mice is associated with microRNA deregulation [transcriptome analysis]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Although Tacrolimus is an immunosuppressive drug widely used in renal transplantation, its chronic use paradoxically induces nephrotoxic effects, in particular renal fibrosis, which is responsible for chronic allograft dysfunction and represents a major prognostic factor of allograft survival. As molecular pathways and mechanisms involved in Tacrolimus-induced fibrogenic response are poorly elucidated, we assessed whether miRNAs are involved in the nephrotoxic effects mediated by Tacrolimus. Treatment of CD-1 mice with Tacrolimus (1mg/kg/d for 28 days) resulted in kidney injury and was associated with alteration of a gene expression signature associated with cellular stress, fibrosis and inflammation. Tacrolimus also affected renal miRNA expression, including miRNAs previously involved in fibrotic and inflammatory processes including “fibromirs” such as miR-21-5p. Specifically, Renal Proximal Tubular Epithelial cells exposed to tacrolimus showed up-regulation of miR-21-5p and the concomitant induction of epithelial phenotypic changes, inflammation and oxidative stress. In conclusion, this study suggests for the first time that miRNAs, especially fibromiRs, mediate Tacrolimus-induced nephrotoxic effects.
 
Overall design CD-1 mice were treated with Tacrolimus (1mg/kg/d for 28 days) or physiological serum as control (n=4) and total RNA was prepared from kidneys. Experiment performed in a one color design, corresponding to 2 conditions (Control: CTL and Tacrolimus: TAC) for a total of 8 samples.
Web link http://www.genomique.info:8080/merge/index
 
Contributor(s) Cauffiez C, Savary G, Nottet N, Pottier N, Mari B
Citation(s) 29362864
Submission date Aug 10, 2017
Last update date Jul 25, 2021
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platforms (1)
GPL13912 Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)
Samples (8)
GSM2739877 CTL_1 [transcriptome]
GSM2739878 CTL_2 [transcriptome]
GSM2739879 CTL_3 [transcriptome]
This SubSeries is part of SuperSeries:
GSE102515 Tacrolimus-induced nephrotoxicity in mice is associated with microRNA deregulation
Relations
BioProject PRJNA397921

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102513_RAW.tar 103.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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