|
| Status |
Public on Aug 12, 2017 |
| Title |
Expression data from Caco-2 cells infected with F. nucleatum |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Caco-2 cells were infected with F. nucleatum (MOI=100:1) or non-infected (control) for 24 hours. Total RNA of cells was extracted using the TRIzol® Reagent (Life Technologies) and cDNA was generated using the PimeScript TMRT Reagent Kit (Takara).
We used microarrays to detail the global programme of gene expression underlying cellularisation and identified distinct classes of up-regulated genes during this process.
|
| |
|
| Overall design |
Affymetrix’ new GeneChip® Human Transcriptome Array 2.0 chips were used to analysis 10 specimens (5 F. nucleatum infection, 5 control).
|
| |
|
| Contributor(s) |
Tang B |
| Citation(s) |
29016688 |
| Submission date |
Aug 11, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
bin tang |
| E-mail(s) |
tangbin811012@163.com
|
| Phone |
15281936788
|
| Organization name |
Southwest Hospital &College of Medical Laboratory Science; Third Military Medical University
|
| Department |
Department of Clinical Microbiology and Immunology
|
| Street address |
Southwest Hospital &College of Medical Laboratory Science; Third Military Medical University
|
| City |
chongqing |
| State/province |
chongqing |
| ZIP/Postal code |
400038 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL17586 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
|
| Samples (10)
|
|
| Relations |
| BioProject |
PRJNA398055 |
Less...
More...