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Series GSE10291 Query DataSets for GSE10291
Status Public on May 07, 2008
Title Identification of Tmem10/Opalin as a novel marker for oligodendrocytes using gene expression profiling
Organism Mus musculus
Experiment type Expression profiling by array
Summary Background
During the development of the central nervous system, oligodendrocytes generate large amounts of myelin, a multilayered insulating membrane that ensheathes axons, thereby allowing the fast conduction of the action potential and maintaining axonal integrity. Differentiation of oligodendrocytes to myelin-forming cells requires the downregulation of RhoA GTPase activity.

Results
To gain insights into the molecular mechanisms of oligodendrocyte differentiation, we performed microarray expression profiling of the oligodendroglial cell line, Oli-neu, treated with the Rho kinase (ROCK) inhibitor, Y-27632 or with conditioned neuronal medium. This resulted in the identification of the transmembrane protein 10 (Tmem10/Opalin), a novel type I transmembrane protein enriched in differentiating oligodendrocytes. In primary cultures, Tmem10 was abundantly expressed in O4-positive oligodendrocytes, but not in oligodendroglial precursor cells, astrocytes, microglia or neurons. In mature oligodendrocytes Tmem10 was enriched in the rims and processes of the cells and was only found to a lesser extent in the membrane sheets.

Conclusions
Together, our results demonstrate that Tmem10 is a novel marker for in vitro generated oligodendrocytes.
Keywords: gene expression profiling for oligodendrocytes, olineu, oligodendrocyte differentiation
 
Overall design 2 Subexperiments:
1. olineu in absence of neurons (control) vs. olineu in presence of neurons
including dye swap design with 6 technical replicates
2. olineu in presence of neurons (control) vs. Y27631 treated olineu in presence of neurons
 
Contributor(s) Kippert A, Trajkovic K, Fitzner D, Opitz L, Simons M
Citation(s) 18439243
Submission date Jan 28, 2008
Last update date Dec 06, 2012
Contact name Gabriela Salinas
E-mail(s) Gabriela.Salinas-Riester@medizin.uni-goettingen.de
Organization name Universitaetsmedizin Goettingen
Department Department of Human Genetics
Lab NGS Integrative Genomics
Street address Justus-von-Liebig-Weg 11
City Goettingen
State/province Lower-Saxony
ZIP/Postal code 37077
Country Germany
 
Platforms (1)
GPL2872 Agilent-012694 Whole Mouse Genome G4122A (Feature Number version)
Samples (12)
GSM259442 Olineu_Neuron_treat_rep1
GSM259444 Olineu_Neuron_treat_rep2
GSM259445 Olineu_Neuron_treat_rep3
Relations
BioProject PRJNA108503

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10291_RAW.tar 298.1 Mb (http)(custom) TAR (of TIFF)
Processed data included within Sample table

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