NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE103328 Query DataSets for GSE103328
Status Public on Mar 15, 2020
Title Assessment of DNA methylation patterns related to femur bone morphology in marmoset bone using the 850K array
Platform organism Homo sapiens
Sample organism Callithrix jacchus
Experiment type Methylation profiling by array
Summary The aim of this study was to characterize the genome-wide DNA methylation profiles of marmoset femur trabecular bone samples (n=6) and identify how they relate to aspects of femur bone morphology. The Illumina Infinium MethylationEPIC Array was used to assess these genome-wide methylation patterns.
 
Overall design Bisulphite converted DNA from the 6 marmoset bone samples were hybridized to the Illumina Infinium MethylationEPIC array.
 
Contributor(s) Housman G
Citation(s) 32170728
Submission date Aug 31, 2017
Last update date Jul 25, 2021
Contact name Genevieve Housman
E-mail(s) ghousman@uchicago.edu
Organization name University of Chicago
Department Genetic Medicine
Street address 920 East 58th Street, CLSC 317
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (6)
GSM2766537 genomic DNA from distal femur trabecular bone Cjac01 (marmoset_intraspecific)
GSM2766538 genomic DNA from distal femur trabecular bone Cjac02 (marmoset_intraspecific)
GSM2766539 genomic DNA from distal femur trabecular bone Cjac05 (marmoset_intraspecific)
This SubSeries is part of SuperSeries:
GSE103332 Intra- and Inter-Specific Investigations of Skeletal DNA Methylation Patterns and Femur Morphology in Nonhuman Primates
Relations
BioProject PRJNA401657

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103328_RAW.tar 242.7 Mb (http)(custom) TAR (of IDAT)
GSE103328_matrix_marmoset850Kmorph_raw_signal.csv.gz 38.9 Mb (ftp)(http) CSV
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap