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Series GSE103562 Query DataSets for GSE103562
Status Public on Feb 12, 2018
Title LAKTP_MTO orthotopic primary caecum tumours from Galunisertib-treated C57BL/6J mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Mouse tumour organoids (MTOs) derived from a compound mutant (LAKTP) intestinal cancer model were orthoptopically transplanted into syngeneic C57BL/6J mice. Tumour-bearing mice were treated with TGF-beta inhibitor Galunisertib or vehicle control. Whole tumour mRNA was extracted from primary tumours and expression profiling was performed with the objective to characterize the tumour microenvironment (TME). As a TGF-beta-activated TME has been associated to a poor prognosis and the CRC consensum molecular subtype CMS4, and the mouse model was found to have such an activated TME, we used the array data to classify these tumours in this mouse model system as CMS4-like. Furthermore, treatment with TGF-beta inhibitor reduced the fibroblast- and T cell-specific TGF-beta response signatures, also associated to poor prognosis in human CRC. This treatment was associated to a strong reduction/prevention of liver metastasis, as well as a reduction of primary tumour (and local carcinomatosis) size.
 
Overall design For every MTO, two biological replicates were included: every strip was set up with 2 control samples vs 2 treated samples
 
Contributor(s) Tauriello DV
Citation(s) 29443964
Submission date Sep 06, 2017
Last update date Jul 25, 2021
Contact name Antoni Berenguer-LLergo
E-mail(s) aberenguerl@tauli.cat
Organization name Parc TaulĂ­ Research and Innovation Institute (I3PT)
Department A8G2 Group - Rheumatology Service
Street address Parc del TaulĂ­, 1
City Sabadell
State/province Barcelona
ZIP/Postal code 08208
Country Spain
 
Platforms (1)
GPL11180 [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate
Samples (20)
GSM2774025 CRC parental 1123
GSM2774026 CRC parental 1124
GSM2774027 CRC parental 1125
Relations
BioProject PRJNA401863

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103562_RAW.tar 42.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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