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Series GSE104319 Query DataSets for GSE104319
Status Public on Apr 18, 2018
Title Altered gene-regulatory function of KDM5C by a novel mutation associated with autism and intellectual disability
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We describe a new variant in histone demethylase KDM5C in a male with autism and intellectual disability
 
Overall design We performed RNA-Seq from primary mouse forebrain neuronal culture. Libraries were depleted for rRNA and strand-specific according to the protocol described in PMID: 25607527
 
Contributor(s) Vallianatos CN, Iwase S
Citation(s) 29670509
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 NS089896 Neutralizing epigenomes in neurodevelopmental disorders REGENTS OF THE UNIVERSITY OF MICHIGAN - ANN ARBOR Shigeki Iwase
Submission date Sep 27, 2017
Last update date Mar 19, 2019
Contact name Christina N Vallianatos
Organization name University of Michigan
Department Human Genetics
Lab Iwase lab
Street address 1241 East Catherine
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (4)
GSM2974357 KDM5C WT
GSM2974358 KDM5C R1115H
GSM2974359 KDM5C H514A
Relations
BioProject PRJNA412360
SRA SRP118979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104319_RAW.tar 2.1 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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