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Series GSE104611 Query DataSets for GSE104611
Status Public on May 15, 2018
Title Expression data from C57/Bl6 Wt mice CD4+ T cells after activation with anti-CD3 plus Wt APC or OX40L-Tg APC
Organism Mus musculus
Experiment type Expression profiling by array
Summary OX40 is a T cell costimulatory molecule in the tumor necrosis factor receptor (TNFR) superfamily. Unlike other costimulatory molecules, OX40 is not expressed by naive T cells, but its expression is rapidly induced following T cell activation, and OX40 costimulation plays a critical role in cell survival, proliferation, and generation of memory cells.
We used microarrays to detail the global programme of gene expression of activated CD4 T cells underlying OX40 costimulation and identified distinct classes of up-regulated genes after OX40 costimulation.
 
Overall design Naive CD4+ T cells (CD62LhighCD44lowFoxp3−) were sorted from C57/Bl6 Foxp3-eGFP reporter mice, and activated in vitro with soluble anti-CD3 mAb and mitomycin C-treated Wt APCs or OX40L-Tg APCs in 96-well round bottom tissue-culture plates. Forty-eight hours later, living CD4+ T cells were sorted from cultures by flow cytometry. Total RNA was extracted with RNeasy mini kit (Qiagen). Complementary DNAs (cDNAs) were then synthesized using Superscript III kits (Invitrogen), hybridization of the samples with Affymetrix mouse arrays was then performed at the Harvard Medical School Facility according to the manufacturer's protocol.
 
Contributor(s) Xiao X, Zhang X
Citation(s) 30021159
Submission date Oct 05, 2017
Last update date Jul 25, 2021
Contact name Xiaolong Zhang
E-mail(s) smdragon@mail.ustc.edu.cn
Organization name Houston Methodist Research Institute
Department Immunobiology & Transplant Research Center
Street address 6670 Bertner Avenue, R7-211
City HOUSTON
State/province Texas
ZIP/Postal code 77030
Country USA
 
Platforms (1)
GPL11180 [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate
Samples (2)
GSM2804084 CD4 T cells stimulated with Wt APC
GSM2804085 CD4 T cells stimulated with OX40L-Tg APC
Relations
BioProject PRJNA413298

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104611_RAW.tar 4.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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