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Series GSE106176 Query DataSets for GSE106176
Status Public on May 31, 2018
Title The allelic difference of histone modifications at Pvt1 locus during the differentiation from mESC to mNPC
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq data of H3K9me3 and K3K4me3 in mouse embryonic stem cells and neural progenitor cells
 
Overall design Chromatin immunoprecipitation has been done for two histone markers in two cell lines with two replicates.
 
Contributor(s) Cho SW, Chang HY
Citation(s) 29731168
Submission date Oct 25, 2017
Last update date May 15, 2019
Contact name Howard Y. Chang
E-mail(s) howchang@stanford.edu
Phone 650-725-7022
Organization name Stanford
Lab Chang Lab
Street address 269 Campus Drive, CCSR 2130
City Stanford
State/province CALIFORNIA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (6)
GSM2831010 H3K9me3 ChIP-seq (ESC_XX1)
GSM2831011 H3K4me3 ChIP-seq (ESC_XX1)
GSM2831012 Input (ESC_XX1)
This SubSeries is part of SuperSeries:
GSE97669 Promoter of lncRNA gene *PVT1* is a tumor suppressor DNA element
Relations
BioProject PRJNA415814
SRA SRP121483

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE106176_RAW.tar 6.3 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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