|
| Status |
Public on Mar 29, 2018 |
| Title |
Gene expression profiling of human musculoskeletal tissue samples |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We profiled gene expression of purified cell types isolated from 5 musculoskeletal tissues: tendon, bone, muscle, cartilage and ligament. We then performed WGCNA to identify tissue-specific transcription factors, signaling pathways and cell surface receptors. The sequencing data for muscle cells is made available here.
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| |
|
| Overall design |
3-4 biological replicates from human samples
|
| |
|
| Contributor(s) |
Evseenko D, Ferguson G, Van Handel B |
| Citation(s) |
29255171, 30194383 |
| Submission date |
Oct 27, 2017 |
| Last update date |
Jul 24, 2019 |
| Contact name |
Denis Evseenko |
| E-mail(s) |
evseenko@usc.edu
|
| Phone |
323-219-0234
|
| Organization name |
University of Southern California
|
| Department |
Orthopaedic Surgery
|
| Lab |
Evseenko Lab
|
| Street address |
1450 Biggy St
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90033 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (35)
|
|
| Relations |
| BioProject |
PRJNA416136 |
| SRA |
SRP122535 |
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